TCONS_00037477 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037477
Unique NameTCONS_00037477
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037477 ID=TCONS_00037477|Name=TCONS_00037477|organism=Clytia hemisphaerica|type=transcript|length=178bp
AAAGCCTgtacaaaattgctcaaatatgGCAACAAACAACCAAGAGGCTG
CAACCTAGGTACCAAGTGCCAAAGCTTCCATCCGAGGATGTGCTCATCAT
CTATTACAAGAGGGGAATGCTTTAATCTTGACTGCAAATTCACGCATGTT
AAGGGAACCAAACGACAtcagaaaaagc
Run BLAST on NCBI

transcript from alignment at sc0001640:12517..12694

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037477 ID=TCONS_00037477|Name=TCONS_00037477|organism=Clytia hemisphaerica|type=transcript|length=178bp|location=Sequence derived from alignment at sc0001640:12517..12694 (Clytia hemisphaerica)
gctttttctgaTGTCGTTTGGTTCCCTTAACATGCGTGAATTTGCAGTCA
AGATTAAAGCATTCCCCTCTTGTAATAGATGATGAGCACATCCTCGGATG
GAAGCTTTGGCACTTGGTACCTAGGTTGCAGCCTCTTGGTTGTTTGTTGC
catatttgagcaattttgtacAGGCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022243XLOC_022243Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037477-exon-sc0001640-1491911889:12517..12694TCONS_00037477-exon-sc0001640-1491911889:12517..12694Clytia hemisphaericaexon
TCONS_00037477-exon-sc0001640-1510915933:12517..12694TCONS_00037477-exon-sc0001640-1510915933:12517..12694Clytia hemisphaericaexon
TCONS_00037477-exon-sc0001640-1575043694:12517..12694TCONS_00037477-exon-sc0001640-1575043694:12517..12694Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001640supercontigsc0001640:12517..12694 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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