TCONS_00037471 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037471
Unique NameTCONS_00037471
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length234

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037471 ID=TCONS_00037471|Name=TCONS_00037471|organism=Clytia hemisphaerica|type=transcript|length=234bp
aaaaaTTTCAATTTCCCTAATTTTCCTCATTTTGAGCATGATTTATTAGC
CATTTAGAGGGCTCCATTCTGCAGTAAATGGAGGACGCAATTTTGatcag
aatgttttcaaattttgcaggtGCATTTTATATAGAATTTTCCATGTTCC
CTATAAATTTCTAAGAGTTTggattattttttgttgagctatGCTATTTT
AAGTACGCAGTTATTAATTTGGCAAAACTTGGAG
Run BLAST on NCBI

transcript from alignment at sc0001639:18920..19153

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037471 ID=TCONS_00037471|Name=TCONS_00037471|organism=Clytia hemisphaerica|type=transcript|length=234bp|location=Sequence derived from alignment at sc0001639:18920..19153 (Clytia hemisphaerica)
CTCCAAGTTTTGCCAAATTAATAACTGCGTACTTAAAATAGCatagctca
acaaaaaataatccAAACTCTTAGAAATTTATAGGGAACATGGAAAATTC
TATATAAAATGCacctgcaaaatttgaaaacattctgatCAAAATTGCGT
CCTCCATTTACTGCAGAATGGAGCCCTCTAAATGGCTAATAAATCATGCT
CAAAATGAGGAAAATTAGGGAAATTGAAAttttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022237XLOC_022237Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037471-exon-sc0001639-1491911889:18920..19153TCONS_00037471-exon-sc0001639-1491911889:18920..19153Clytia hemisphaericaexon
TCONS_00037471-exon-sc0001639-1510915933:18920..19153TCONS_00037471-exon-sc0001639-1510915933:18920..19153Clytia hemisphaericaexon
TCONS_00037471-exon-sc0001639-1575043694:18920..19153TCONS_00037471-exon-sc0001639-1575043694:18920..19153Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001639supercontigsc0001639:18920..19153 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.990625	0	1.12164	0	2.67183	3.16697	6.36802	4.76933	2.50434	3.10203	0	0.659751	3.953	2.05262	0	0.603659	5.94927	0	7.37139	4.40779	3.83117	4.2046	2.27166	1.03264	2.12718	0.949229	9.5084	10.1476	8.79613	10.0821
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037471 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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