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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037468 ID=TCONS_00037468|Name=TCONS_00037468|organism=Clytia hemisphaerica|type=transcript|length=431bp
TGCAATACTGAGGACTTGTTTTGCATGTGGTTATGGGTATAAATTGAAGT
CCTTGAACACGGTTTGAGTACACAACAAAATCAAGAAGCAGCCAAgaagc
aaaaatgaagtcaatGTTGGTTATAACTCTCCTTCTCATTGGGGcATCTT
TAAGTTCAGTAATTGGTCTAGTAATTAAATTTACACCAGGACTAGTGACC
GTGATTGATCCAGCATTATGTCAGGATAACCTTTGTGCGGGCAGAGAAGA
AGGTGAACATCAAATAACCTCGGAGCTTGTTGTTGAATGTGGTCAAAATT
GTAATGTATTGAAATGTTACCAATGTAAACTTTTCGGAAAAATATTTGGT
ATAACGGCTGATCCTGCCACCTGCGTGTAAAGTAAGAGACTAAAGATGCG
TCTTAAATATCTTACTTCTTAACCTCACCNN Run BLAST on NCBI transcript from alignment at sc0001639:23652..27322+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037468 ID=TCONS_00037468|Name=TCONS_00037468|organism=Clytia hemisphaerica|type=transcript|length=3671bp|location=Sequence derived from alignment at sc0001639:23652..27322+ (Clytia hemisphaerica)
TGCAATACTGAGGACTTGTTTTGCATGTGGTTATGGGTATAAATTGAAGT
CCTTGAACACGGTTTGAGTACACAACAAAATCAAGAAGCAGCCAAgaagc
aaaaatgaagtcaatGTTGGTTATAACTCTCCTTCTCATTGGGGGTAAGT
TTGTATCTTGTATTTATTTATGCTTTTTTGAATGGTATACTTGGTCCAGA
TCATAGATTTCTGCAAAGACCGAAGGGATAGATCTAGATAgagttttttg
gctgaaaagtgtgccgtggttatgTTGGAAATCCtatctaggtcacgtga
cattacaatatgaTTTTTTAGTTCTTGAACAGGCAGAAGCTTtgcggatt
ttcgaaaacaatagcattaatatttttttctatattcacttttgttttgc
ttcaaaatgcctaaagcactccatctaggCTTTCCGGCTTTTCAGAAATT
TATGGTCCAGATACTTAAACTAAATATTTGGAATATGATCAACGATTTAA
CTAAGATTCCACCGAGAAAGAAATGTATAGCCTATTAAAGGTGTGAGCAT
TTCAAGACTTTTTCAGATTGCCTTCTTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcatcttgcc
ctagtaccccccgggtcTTATGCTTGGTAGccattgttcttaaacaatag
agccattgtttaggtacgaAAGACTGAGCCaacatattcttataaaagtt
aTAACATATAAAGAAAACACATGTATGTTgccttttattttcaaatcgtt
TAATTAAAAACCCGTATCACTTTTCCAACAATATACAACTTCTAAAAATT
ATAGCACGACTGGGTCGGTGCCgatggggggggggcacttgaaaatgaaa
aatggagaaACATCTGggtgaaaaatcgacccttacggtgcattttcttg
aaaacatttGTTCATTTTAAAGACCAAATTTAGCTGAAACAAACCTGTAG
GCTGTGGTTCTCGTTGACTTTTTCATGGCTGTATGGCATTGACAGTatgg
ctgaaaaacacacacTATTATAACCTAAGATTGTAGAAGAACCTTCAATT
AATAAAGGACTTTTTTAGAGAAAGTAATATATCAAACAATTCCTGCCCTT
CCTGTTATTGTATTTCTAAAAGAATATTGAGAGACTTCATGGAAGGATTT
CCATATCCCTTTTAAGGTTAAATTTGAAGACAGGAGACAAATAACTTTTC
CTGTTTGTTTCCTATCTGCAATACTGAGGACTTGTTTTGCATGTGGTTAT
GGGTATAAATTGAAGTCCTTGAACACGGTTTGAGTACACAACAAAATCAA
GAAGCAGCCACgaagcaaaaatgaagtcaatGTTGGTTATAACTCTCCTT
CTCATTGGGGGTAAGTTTGTATCTTGTACTTATTTATGCTTTTTTGACTG
GTATACTTGGTCCAGATCATAGATTTCTGCAAAGACCGAAGGGATAGATC
TAGATAgagttttttggctgaaaagtgtgccgtggttatgTTGGAAATCC
tatctaggtcacgtgacattacaatatgaTTTTTTAGTTCTTGAACAGGC
AGAAGCTTtgcggattttcgaaaacaatagcattaatatttttttctata
ttcacttttgttttgcttcaaaatgcctaaagcactccatctaggCTTTC
CGGCTTTTCAGAAATTTATGGTCCAGATACTTAAACTAAATATTTGGAAT
ATGATCAACGATTTAACTAAGATTCCACCGAGAAAGAAATGNTCGGGata
ccaaaatatttggaatATGATCAACGATTTAACTAAGATTCCACGGAGAA
AGAAATGTATAACCTATTAAAGGTGTGAGCATTTCAAGACTTTTTCAGAT
TGCcttctttttagttttttggcctCAGTTATACACGATGAAAgataatt
tcattgttttattaatcaattattttcatttcagcATCTTTAAGTTCAGT
AATTGGTCTAGTAATTAAATTTACACCAGGACTAGTGACCGTGATTGATC
CAGCATTATGTCAGGATAACCTTTGTGCGGGCAGAGAAGAAGGTGAACAT
CAAATAACCTCGGAGCTTGTTGTTGAATGTGGTCAAAATTGTAATGTATT
GAAATGTTACCAATGTAAACTTTTCGGAAAAATATTTGGTATAACGGCTG
ATCCTGCCACCTGCGTGTAAAGTAAGAGACTAAAGATGCGTCTTAAATAT
CTTACTTCTTAACCTCACCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037468-exon-sc0001639-1491911889:23652..23795 | TCONS_00037468-exon-sc0001639-1491911889:23652..23795 | Clytia hemisphaerica | exon |
| TCONS_00037468-exon-sc0001639-1510915933:23652..23795 | TCONS_00037468-exon-sc0001639-1510915933:23652..23795 | Clytia hemisphaerica | exon |
| TCONS_00037468-exon-sc0001639-1575043694:23652..23795 | TCONS_00037468-exon-sc0001639-1575043694:23652..23795 | Clytia hemisphaerica | exon |
| TCONS_00037468-exon-sc0001639-1491911889:27036..27322 | TCONS_00037468-exon-sc0001639-1491911889:27036..27322 | Clytia hemisphaerica | exon |
| TCONS_00037468-exon-sc0001639-1510915933:27036..27322 | TCONS_00037468-exon-sc0001639-1510915933:27036..27322 | Clytia hemisphaerica | exon |
| TCONS_00037468-exon-sc0001639-1575043694:27036..27322 | TCONS_00037468-exon-sc0001639-1575043694:27036..27322 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001639 | supercontig | sc0001639:23652..27322 + |
Blast
The following BLAST results are available for this feature:
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