TCONS_00037446 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037446
Unique NameTCONS_00037446
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1334

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037446 ID=TCONS_00037446|Name=TCONS_00037446|organism=Clytia hemisphaerica|type=transcript|length=1334bp
GGATAAACAGGATAAAAAAGTGATTTCATAAACAGCGTGACCATCGTCGC
AATACAAAATCATGGAGAAAATTGGTGTTGCTGTTTTAATGTTACTCGTT
TACTCCTCACTGGTCAAAGGACAACAGACGTTACACGATAACAGTAAAAT
AGAATACACAACAAACAAAACGAAGATTTATTTGGCTGCGTTTTTCTTAA
ATGTGGAGAAAGATACATACTCATTTCGAGCAGGAATGGAAGTAGCAAGG
AAATTGATAAATGAAGATGATCGAATTTTGAaagattatgaaattgtgaT
TCACTACCACAACTCGTTAaacgCTTGGCCGACAGTGAGAGCTTTGTACA
AATTTATGGAGACAGGACCGGTTAAGCAAATATTACTGGGACCAGCATTC
AGTACGGTCAACAAGAGGATTATACCTTTCGTTACAAACCTTGCACTGCC
ACAGGTTTCATTTTCCGCCCGGAAACGATTCAACGAGCGTCGTGAGATCG
ACGGACGTCTTGTTCCGACGCCGTTAGAAGAAAAAAGATATCCTTATTTG
GTGCGGACCACGCCCTCTTTTGTTCAAAATAATTACGCAAGAGTTCGGGT
CATCCNTGGTGCGGACCGCGCCCTCTTTTGTTCAAAATAATTACGCAAGA
GTTCGGGTAATCCAAAACCTTGGATGGAGAAGAGTAGCGATTGTTTTCGA
TGACAAACAAAATTATGAGAAAGTGGAGGATTTGACAGAGCAATTCAAAC
AAGCCAACATTGATGTTGTTGCAACAGAAAGATTTGAGCCAAAAGGTTCT
TATGAACATTTTGATGCTGTTTATGATAATTTGAATAAATCAGATGCTCG
TATTATCGTTGGTTTCTTCTTGACAGATGAAGGGGCCTGGGCTATGATGT
GTGAGGCTTACAAACGAGGCGTTTACGGGGCACGGTACACGTGGTTTGTA
TCAGAGAGCGTAACCACCCTCTTGGGAACACGACAATTCCATGACGTCGA
TATTAATGCCACGTGTAATTACGCACACGTATTGAAAGCTATGGATAAGA
GTATATTTATCACGACTGTGAACTTGAGAACTGATAATGTCAAATCTATT
GCTAACTTGAGTACATCCTTCATTTGGCAGATGATAAAGAACCAAGATTT
GAAACATATAATCGACCACAATACAACGCACCCTCACGATCCCGCCCCTA
CTTCCGGCCGCCCAAATATACTTGGGGCACGTGCTTATGATGCGGTGTAT
ACAGCCGCCCTTGCTCTTGATCGTCTCATCAAAAAGAAAGGGGTTGGTTA
AATTTGGAGGACCAACCAAAGACGATAGTTTAGG
Run BLAST on NCBI

transcript from alignment at sc0001631:32512..42424+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037446 ID=TCONS_00037446|Name=TCONS_00037446|organism=Clytia hemisphaerica|type=transcript|length=9913bp|location=Sequence derived from alignment at sc0001631:32512..42424+ (Clytia hemisphaerica)
GGATAAACAGGATAAAAAAGTGATTTCATAAACAGCGTGACCATCGTCGC AATACAAAATCATGGAGAAAATTGGTGTTGCTGTTTTAATGTTACTCGTT TACTCCTCACTGGTCAAAGGACAACAGACGTTACACGATAACAGTAAAAT AGAATACACAACAAACAAAACGAAGATTTATTTGGCTGCGTTTTTCTTAA ATGTGGAGAAAGATACATACTCATTTCGAGCAGGAATGGAAGTAGCAAGG AAATTGATAAATGAAGATGATCGAATTTTGAaagattatgaaattgtgaT TCACTACCACAACTCGTTAGTAAGTGGAAACGCTCTCCTATACACGCTTT CTTTAAAgacaaactataaaagaacatagccaaaatatattgagaacaag ttaagaacatgcaaaaaatatattgagaacaagttaacAGCGTGGCAAAA GTATctagaataagttaagaacattttaaggactTGCAGATTCAATTTCT TAGCGAATtgaggaaaataagaacattataaaaacatttttttacgtgaa actcaaaaggttaagaCCATCAAACGGCTTCAAATGTGTTGGTaaacaaa aaaacgtgtagaccaTTTCACTGATACACTAAACTATGCTATAGCCTAAG AAAGATTCCATTACGTGTTGTAAactatcccagctggcacacaacgtttt ttcaacgtttatctaacgttcacaacatccatataacgtcagATGGATGT TGAAACAATGCGTATCAATTGGGATGTGTATCTACATTTTGTAATGTCTT CAACcaccaatttttcatagaacgCTTGGCCGACAGTGAGAGCTTTGTAC AAATTTATGGAGACAGGACCGGTTAAGCAAATATTACTGGGACCAGCATT CAGTACGGTCAACAAGAGGATTATACCTTTCGTTACAAACCTTGCACTGC CACAGGTAGGTAAATAGGTTTTTCATCTTTCGCCATAGTCATGTAACTTA AAGGAAAATCTGCCAAAAATAAGTCAAATTATGCTAACAAGGTTTCCACA TTGTAGGCAAAAATCACGGGTAAAaagttgtagacaaatgaaatttcagt gaaaaattatGAGagatagagcaaaatgactcttcaaagtgtctgaaagg ggagggaatttaagaaaaacacttttgaagtcgttgcattgattTTGAAT TGCCTTTGAGGGAACcgcaagcaaaaaatcagcgttttgatactggtgta agccagttaatcaagcccttgtggttagattgcagtgggtgactttgaaa gactttggatgggtttggaaagcacccagaacctattgggaacttgtttt tgatcaatattgaagtattttgcaaacattgcagaagtctacaaaccttt tgtccatgattgaaAAAGACAGTTAATACTGTCTAAGCCAAGACTTTCTG TAAACTGAATTAGTTATTACAACTATGAAATCCAGAGTTAATAAATTTCT ATATATTTGTGATATTCATtatgtaatgttttatacggtaACACTCAAAA TAGCCCGGGTGCTTGCGactagttttattgtttggATTCAGAATTAGTGG TACCCGGTAtatttttgggtgcttccgtataaaacattaagTCATGGATA TCACGCATTATTATCATCCTTAGGTTTCATTTTCCGCCCGGAAACGATTC AACGAGCGTCGTGAGATCGACGGACGTCTTGTTCCGACGCCGTTAGAAGA AAAAAGATATCCTTATTTGGTGCGGACCACGCCCTCTTTTGTTCAAAATA ATTACGCAAGAGTTCGGGTCATCCNTGGTGCGGACCGCGCCCTCTTTTGT TCAAAATAATTACGCAAGAGTTCGGGTAATCCAAAACCTTGGATGGAGAA GAGTAGCGATTGTTTTCGATGACAAACAAAATTATGAGGTAAGTTGTAAC CACTGATTTCTAACAATTTGACTAGATCTACCATCATGGACAAAATTACG AGGTAAGCTGTAACCTCAGATCTGTAACAATTTGACTagatctacaatca tggacaaaattatGAGGTAAGTTGTAACCACAGATTTCTAACAATTTGAC TAGATCTACAATCATAGACAAAATTACGAGGTAAGTTGTAACCACAGATC TCTAACAGTTTGACTagatctacaatcatggacaaaattacGAGGTAAGT TGCAACCACAGATCTCTAACAATTTGACTACCGTAGATCTATAATAAatc tataataaattcttggatagataaatagatagatattttacgtggatagt tCAGTAATCTAGTCTagtctttcaattgtttttgcAAAAAACACGTCCAC GGCCAGATGGCTtagctatctatgaactgaacggaacattggaaggaacG AGGATTTGAACCGCAAAGCCCTGGTCTGAGACGCTGGCGCCTTTGACTAC TTGGCCATCCTTCCTTTCGTATTAGCAAGGTTATGCACGGCTTTATTTTG ACCATAAAatgcgataccgtaggcctgtacataacttgccaaagtAAATC ATGtaagtgaaatcttatgtacaggcctacgatatcgtattgaacggtct aaataaacacttgcttaacTTCGCTATTAGATTTTCCGTAACGTAGAATT TTTAGGTACCAACcttgaataaaatgaaatatgTTCATCTTCTAGAAAGT GGAGGATTTGACAGAGCAATTCAAACAAGCCAACATTGATGTTGTTGCAA CAGAAAGATTTGAGCCAAAAGGTTCTTATGAACATTTTGATGCTGTTTAT GATAATTTGAATGTGAGTTATTCTAATTTCACCATAGCGAACCgtggtgc agtggtagagcatctaGCTATGGttcacaaggttgtgggttcaacccatt gagtttaaagcccgaagggctagagtagaatctctaacctttctcaggca agaaaaagtgaagccttaaaattacGCCgttttttgacgacagattgaat ctagcaattcctttttttacgattgatattttttcgaaatttagcggtaa atagcggtttagtttcaatctgtcatttgtgtaaaaaccaggcgagccgc tcaaggccttcaactttgttggcttcaaatcctaccaaagagattgactt ctagccttcggcttctacttcattggttcaacccccagccgggtcatacc aaagattctcaaaatagtACTTGTATAATGTGAGTTATAATTTCTCCGAA AAAAAATACGATACACTTACAAACCTAGCGAACTGTGGTGCAGGAGTAGA GTATCCGGCTACGGTTCACAAGGTTGTGAGTTCAAAAAATTCTCAGAata gtacttgatgcctctctgcttgatgctcagcaattaagagaaggatcaag ggtaagtggagaaatccaaggagaaagagtggcgccctcccctatcttcg ggtagatagctatcgaaagaggaaccTTTGGGTCGCCTCCCGACTGCAGT CGCAGACTTAATACTACAAACATATACTAAAAACAAGGAGAATATATAAA TACTTCCTCCTCCCATTAAGAcactaagtgatatcgccaattttttttaa ttttggtgtatattttatttcattttcttattaGACGATCCTATATAAAG TTTAGGAGGCgggcgggataaatttgaaaacggcgGTTAGCACGGGGCGG AGAAAGCAGTGACAGAGGTGCTTAAAGTTTGTTTCAAACTcaaccgccac ttttttcccgtgaaccaccctgacgccctgactttttgcatatatttatt ttcccGCGTTTAGTGACCCTcaaaaggccggtctccactttcacgcgaca tgagcgaaaacttttattacatttttgtaAGGtaattggtcggttgaaaa atgaagcaattccattagctgaagcaaaaaaggttaagaaaaacactGTC GGCCATTTCGcgtgaaagtggagaccggccttaacggACGATAGTATTGT TTATCATTTTTTCTAACTTAGGTAAGATCCTTTACCAGCTTTTTAACTGG TAAAcagttttccaagaaaacataaCGCTCAACTCAATCCTCTCTGTATT TTAGAAATCAGATGCTCGTATTATCGTTGGTTTCTTCTTGACAGATGAAG GGGCCTGGGCTATGATGTGTGAGGTAATAAAACCTGTCTCAAAATAATCC GGCTAATTCGGCGCAGTAGCATAGTTTTAGGATCTAGAAGGTAAAAAAGT TCTAATAAAGTCGAGAAtttagcctggaagccacttaacccctcccaaat cgaaaaatccaatgaagcaaagttgaagtactgaaactgcaattctcgcc cgacctttaaattctaaaaaacgttaaaatacccaaaattgccaatatat ttcggagCTGATTGTAGAATACCTTCAACGCTAAAATATTTctccttttc aaacataattccaatttatatgctcgtaaatctggttttttggtagtttt ttattcaaatgccacaatttttattttgtgacgtaacgtcaaaaagatga tgctcaattgtcattgaactcgttgtgtgacgtcaattttttgaaatatg tggCCTCCAtgaagctatatattcgaaaatattggacagcaaagaagcca atcaattgtcgctatttacgcgcgtcggataataaattgaatatattgtc cgggggtagtgaaatatctacaaaatttgccttgtttgaGGGCAAAtctg ctctgtttgggggtaattatGAATGTCCGGGGCCTTAGATCTGTTTTCCG GGAGGggggggtcaaaattcacacGATCCGGTTGGTGgggtaaatttaaa aaatatgtgtTACCCTCCACCCcatatattcattttttttctggaagagc ccattctttaaattctttaaatagACCATCTCTATACAACTTACAACTTA TTTCgtcttttatatattttttttacaggCTTACNAAAAAATGTgttatc ctccaccccctatattcattttctttcttaaagAGCCCAttctttaaatt ctttaaatagACCATCTCTATACAACTTACATTTCgtcatttatatattt ttttacagGCTTACAAACGAGGCGTTTACGGGGCACGGTACACGTGGTTT GTATCAGAGAGCGTAACCACCCTCTTGGGAACACGACAATTCCATGACGT CGATATTAATGCCACGTGTAATTACGCACACGTATTGAAAGCTATGGATA AGAGTATATTTATCACGACTGTGAACTTGAGAACTGATAATGTCAAATCT ATTGCTAACTTGGTGAGTGCTTGGCGAATGCCCCCCCCCTGCCCAGCGGa ggttttttcaaagaggcgccgaaatacaaagggtacaaaataactaatta ctaattttggcgcccctttgctcttttacaccttagatttggcagttttt ggccaaaaagagagaaaatacccaaAAGCGAATTAGTAATCGTTCTTAAC GTGTAGAAATCTCATCTTAGGGCTCTTTTATTAAAATGGGACCTCGATTC ATGTTAAATATGCCTCTGGGATGCAAAATCTACCTAAAATACACGCTTAA AGTCAGTAAAACTCCTGATTTCACGTGTTTTAATCATCGTCAAAAACACT CAGAAAATATTAAGTTAAAGTGCGcgcgaaaatcttttttttaagagTTG CGTGAAAATACAAGGGTCAAGCTGGATTCTTTACAAGctctttgatgact ctgttgatcgttaaatgttgagacaaatgtattcattactttttctaaag aacgcgtcttccctattgtttagaaataaccaatcagctaagcatcttgt aaaaactccagctcatcccaaataAAAGGCGCGCAAAAATTAACGGAATT AAGGTATGTATTTGAAATGCTTAAATTTTCTCTCTCAGAGTACATCCTTC ATTTGGCAGATGATAAAGAACCAAGATTTGAAACATATAATCGACCACAA TACAACGCACCCTCACGATCCCGCCCCTACTTCCGGCCGCCCAAATATAC TTGGGGCACGTGCTTATGATGCGGTGTATACAGCCGCCCTTGCTCTTGAT CGTCTCATCAAAAAGAAAGGTATTCATAATTCCAAGTTTGGGTGAAATTC CATAAAGTTTAAATCTCcctccccagctggcacacaatgttgtttcaacg tttatctaacgttcacaacgtccatttaacgttagattaacgttgaaaca acgttgtgtgccagctctCTCGTGACTAGAGAAGAATCTTCAGTCTTTGG CagagaagaaaaataaagctttttagatTTAAGCCATGTCcgttttattt ttcgaaattgccGATAAAATTTATTTCGATGCGGCGTAATTGAAAATTCG ACTAATCCAGACGTGTTTTGTTACCTCGATGGACGAAAGAACTTGTTCAA GCTCAGTTCATTGTAGATATGAGTGATCCTCTACATCCAAAATTACTCta atgtactgaaaaaaatgaacaatgaACGATAGAATATGAgaaatttttca ggtttttcagGCTTAAGTTATGTATTTTAAGGGAAATCCGTCATTGTGGA TTCAGGTTTCGATTTTTAGCAGCTGGCATACAacgctgtttcaacgttca tctaacgttatatggacgttatgtgaacattagataaacgttgaaacaac gttgtgagCCATCTGAGTTAcaaaaatcgaacgtttgcttccataatggt agAAATCAAGTAGATTACTTAATTGAAAAtctctaaatttatttttctat agGTAACTCGTCCTTATTGACCAAATATGGTGATCGTAAAAAAGCATTGG AAATCACACGAGAATTGCTCAACTCAAACTTTGAAGGCATTACTGTAAGA AAATTGGTTACacagcattttcaaattttcaaataaggATATGTAGTGga atctctttaactcgaacctctataacacgaaagtctccttaactcgaaca ggtattatggtcccttcagcttcagaacaaatttgtgttccccgtgcggg tTCGAGCTATGAAGACACCACTGTAGCATCTTTTCCCGTTCCCGTGCCGC gtgagttttttgttttgagaatACACcatttcgaccgtagccaccaaatT TTCACAAAGgatttttttgtccattttataccaccctaaaaccgtcccag tctttttttcgcacctatagacaatagaaaagtgtgtaaaaaaaagattg gatcgagtttaaggAAATAGTTAGATAATAAAGTGGTACTCGCCTGACCG CGTGACTACGGTCCAAAAGGTGTATTTCATTTGTTAactccccggggggg gggggggggggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNcactgggtttgcggactgacggtatgtgc gggccaaaaattggcttttaaaaatGCACCCTTATAGCGCAGCAAAAATc tgtgaaaatcatacccttaaagtgcattttcccccaaattttcgatccct ttcgtgcaaaaaatggtcaaaattagcctccgtctcggaagaggactggg cccgaatttgcggacattttgacagtttcactttcgttttcggctatacg acagcgttttcaggCAGAAatcagaggaaatctgtgaaattatggcaggg aatgttatcctatttttccagtgtttctcaagattgaagcaagattattg ttctagaaagttcataaaggcctaatagttccagattagtatgatttcat cagaaaaaaacatttacaccaaagctccNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNgaaggctaccaaaaatagcaatgtcctccatcagaac aactttaacataagggacaaggacagtcaagaagtctactttgttgaaaa tttgcacaaaacacttagaaaatggtactatgaaAACCCATTCTATACTC GTAAAGGATAGTTGAACGATCAGCAGTTGAGaaggttgattaaaatagaa atcaaagcacacataataaagtataccatatatatttgtccagaaaaaac tggcatgttgtttgctttgttttggtgtttaaaaatatgtacttatcagt cctaaaaaatacaaatttgaatataatgagggcaatgagtctggttaaat gttactatatttacaagaaaggattactgaaaaaatactactgtagataa actaaactcaaaaactaaaactttaccataaatttacattacgacatttt aaaattctttctttaatagcaacaaagaaaaaaatatggctcaaagtttt aaaaatagagctagtcagagcttcaattcagtaggtatagagctttcaaa atttgaaaacagacactgcattgggcactacaagactagagaaagatgtc aaccatccacacgtacacggttttttcgattcatgaaaaaaataaagtat ttatcaaaaaaaggttctcttttttttggtaatcaattccaaccaACAAC AATCAAtgtaacagttttttgaaaaccatcccacagtgtaaacattacca accaacaaaacccacaccgccaaaattgtaaaaataagtcaatataattt ctatcaacaatttctcgtaaaatgttttttttccaacattctgattacca atcatggctggaggcatcatgtgtagagtgactgtgtggcatttcattgc ttttaatgaccatgataccaaacatcaaccaaataaaactgacgccaagt caaatctgtcaattaaaaatttccatgaaaattataatcaaaacttatct cgtaaaatgcttttttcaacattctggaagTGTTCAAAGTCaaaggtatc atatgtagagccaagcaatacatgaaaagtcatttgctatctcatttgcc atgagatatatgagtctacaaatcaaacaaaaaccaacaaatcatgtctc ttcactttcatgtcacatcgtgtttatatggggtatcagaaagccaatcc acaagaagagccatcttcctttattatggagtgttccgaaactattggta ggttgtttggaagtaaagaaacccacacagtttgttttattttgaagatt taacttgaaaacaaacttcatctttccagcagaaactcatgtttcaacct gacataacattggtcagtcggatctgctactaacatgtaatagttttatt ataaccgagcttgagaatccgtacgcagcacttgtaacatgtattatgtg tataattatgtcagtcgacttgaatcatgatacattactcagatttcact ggatgcattttcgctgtgaaattatccgcaaaattcgCTGACCGCGTttc gagacggaggctaattctagcatttttggtcaaagtatctagatttttca agaattttctgaaatttctacccttacagtgcatctctagtttttccgac ccttacagtgcattttaaacatattggaaaaggtaccctaaggacccgca catacccgtcggtccttttgcccagccgccccccccccccggggttaaCT CCACTTTGTAAGACTAAGGGGCGAGTCTCCTTAGTAGAGTAAGAGATGAT TTTTCAATAAGTTTTATCTACTTTTTACTATATGCAAATGTATTTTTCTC AACATTTTCCTATCACCAGGGGTTGGTTAAATTTGGAGGACCAACCAAAG ACGATAGTTTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022216XLOC_022216Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037446-exon-sc0001631-1491911889:32512..32830TCONS_00037446-exon-sc0001631-1491911889:32512..32830Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:32512..32830TCONS_00037446-exon-sc0001631-1510915933:32512..32830Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:32512..32830TCONS_00037446-exon-sc0001631-1575043694:32512..32830Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:33332..33466TCONS_00037446-exon-sc0001631-1491911889:33332..33466Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:33332..33466TCONS_00037446-exon-sc0001631-1510915933:33332..33466Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:33332..33466TCONS_00037446-exon-sc0001631-1575043694:33332..33466Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:34185..34449TCONS_00037446-exon-sc0001631-1491911889:34185..34449Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:34185..34449TCONS_00037446-exon-sc0001631-1510915933:34185..34449Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:34185..34449TCONS_00037446-exon-sc0001631-1575043694:34185..34449Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:35207..35323TCONS_00037446-exon-sc0001631-1491911889:35207..35323Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:35207..35323TCONS_00037446-exon-sc0001631-1510915933:35207..35323Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:35207..35323TCONS_00037446-exon-sc0001631-1575043694:35207..35323Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:36616..36684TCONS_00037446-exon-sc0001631-1491911889:36616..36684Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:36616..36684TCONS_00037446-exon-sc0001631-1510915933:36616..36684Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:36616..36684TCONS_00037446-exon-sc0001631-1575043694:36616..36684Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:37620..37823TCONS_00037446-exon-sc0001631-1491911889:37620..37823Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:37620..37823TCONS_00037446-exon-sc0001631-1510915933:37620..37823Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:37620..37823TCONS_00037446-exon-sc0001631-1575043694:37620..37823Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:38450..38630TCONS_00037446-exon-sc0001631-1491911889:38450..38630Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:38450..38630TCONS_00037446-exon-sc0001631-1510915933:38450..38630Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:38450..38630TCONS_00037446-exon-sc0001631-1575043694:38450..38630Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1491911889:42381..42424TCONS_00037446-exon-sc0001631-1491911889:42381..42424Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1510915933:42381..42424TCONS_00037446-exon-sc0001631-1510915933:42381..42424Clytia hemisphaericaexon
TCONS_00037446-exon-sc0001631-1575043694:42381..42424TCONS_00037446-exon-sc0001631-1575043694:42381..42424Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001631supercontigsc0001631:32512..42424 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0315358 0 0 0 0 8.7425e-08 0 0 0 0.0749979 0.121993 0 0 0 0.710801 0.890461 0.939976 3.82418 0 0 0 0 0 0 0 0.034808 0 0 0 0
Blast
BLAST of TCONS_00037446 vs. Swiss-Prot (Human)
Match: GABR1 (Gamma-aminobutyric acid type B receptor subunit 1 OS=Homo sapiens GN=GABBR1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 7.509e-18
Identity = 64/223 (28.70%), Postives = 104/223 (46.64%), Query Frame = 3
Query:  612 RTAPSFVQNNYARVRVIQNLGWRRVAIVFDDKQNY-EKVEDLTEQFKQANIDVVATERFEPKGSYEHFDAVYDNLNKSDARIIVGFFLTDEGAWAMMCEAYKRGVYGARYTWFVSESVTTLLGTRQFHDVDINATCNYAHVLKAMDKSIFITTVNLRTDNVKSIANL-STSFIWQMIKNQDLKHIIDHNTTHPHDPAPTSGRPNILGARAYDAVYTAALALDR 1274
            RT PS   +N  RV++ +  GW+++A +    + +   ++DL E+ K+A I++   + F     +        NL + DARIIVG F   E A  + CE YK  ++G +Y WF    +        F   D +  C    + +A++  I    V L   N +SI+N+ S  F+ ++ K   LK        HP +       P      AYDA++  ALAL++
Sbjct:  285 RTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEAGIEITFRQSF-----FSDPAVPVKNLKRQDARIIVGLFYETE-ARKVFCEVYKERLFGKKYVWF----LIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKR--LKR-------HPEETGGFQEAP-----LAYDAIWALALALNK 483          
The following BLAST results are available for this feature:
BLAST of TCONS_00037446 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GABR17.509e-1828.70Gamma-aminobutyric acid type B receptor subunit 1 ... [more]
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