TCONS_00037444 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037444
Unique NameTCONS_00037444
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1729

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037444 ID=TCONS_00037444|Name=TCONS_00037444|organism=Clytia hemisphaerica|type=transcript|length=1729bp
TACAGGATAAACAGGATAAAAAAGTGATTTCATAAACAGCGTGACCATCG
TCGCAATACAAAATCATGGAGAAAATTGGTGTTGCTGTTTTAATGTTACT
CGTTTACTCCTCACTGGTCAAAGGACAACAGACGTTACACGATAACAGTA
AAATAGAATACACAACAAACAAAACGAAGATTTATTTGGCTGCGTTTTTC
TTAAATGTGGAGAAAGATACATACTCATTTCGAGCAGGAATGGAAGTAGC
AAGGAAATTGATAAATGAAGATGATCGAATTTTGAaagattatgaaattg
tgaTTCACTACCACAACTCGTTAaacgCTTGGCCGACAGTGAGAGCTTTG
TACAAATTTATGGAGACAGGACCGGTTAAGCAAATATTACTGGGACCAGC
ATTCAGTACGGTCAACAAGAGGATTATACCTTTCGTTACAAACCTTGCAC
TGCCACAGGTTTCATTTTCCGCCCGGAAACGATTCAACGAGCGTCGTGAG
ATCGACGGACGTCTTGTTCCGACGCCGTTAGAAGAAAAAAGATATCCTTA
TTTGGTGCGGACCACGCCCTCTTTTGTTCAAAATAATTACGCAAGAGTTC
GGGTCATCCNTGGTGCGGACCGCGCCCTCTTTTGTTCAAAATAATTACGC
AAGAGTTCGGGTAATCCAAAACCTTGGATGGAGAAGAGTAGCGATTGTTT
TCGATGACAAACAAAATTATGAGAAAGTGGAGGATTTGACAGAGCAATTC
AAACAAGCCAACATTGATGTTGTTGCAACAGAAAGATTTGAGCCAAAAGG
TTCTTATGAACATTTTGATGCTGTTTATGATAATTTGAATAAATCAGATG
CTCGTATTATCGTTGGTTTCTTCTTGACAGATGAAGGGGCCTGGGCTATG
ATGTGTGAGGCTTACAAACGAGGCGTTTACGGGGCACGGTACACGTGGTT
TGTATCAGAGAGCGTAACCACCCTCTTGGGAACACGACAATTCCATGACG
TCGATATTAATGCCACGTGTAATTACGCACACGTATTGAAAGCTATGGAT
AAGAGTATATTTATCACGACTGTGAACTTGAGAACTGATAATGTCAAATC
TATTGCTAACTTGAGTACATCCTTCATTTGGCAGATGATAAAGAACCAAG
ATTTGAAACATATAATCGACCACAATACAACGCACCCTCACGATCCCGCC
CCTACTTCCGGCCGCCCAAATATACTTGGGGCACGTGCTTATGATGCGGT
GTATACAGCCGCCCTTGCTCTTGATCGTCTCATCAAAAAGAAAGGTAACT
CGTCCTTATTGACCAAATATGGTGATCGTAAAAAAGCATTGGAAATCACA
CGAGAATTGCTCAACTCAAACTTTGAAGGCATTACTGGGTTGGTTAAATT
TGGAGGACCAACCAAAGACGATAGTTTAGGTCACGTCATCATTAACCAAT
GGAAATCGCTGCTTCCTTCACCGTTCGGTAAATTAACGCAAGTGGCGTAT
TTTAATCCAGCTGAAAACGAGATGGATATCAAGCCAATTAATGATACCAT
ATTCACAGATAACATCCTAAGGTTAGATGGTATACAGACAGCACGGATCG
AATTATACAGTTCACGGCACGTTTTGTACATCATATGGACGTTAATTGGA
CTTTCAGTTTTACTGGctctcactttttttatcattaacATGAAATATCG
AACAGTCAGATTAATCAAGATGTCAAGCC
Run BLAST on NCBI

transcript from alignment at sc0001631:32508..44804+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037444 ID=TCONS_00037444|Name=TCONS_00037444|organism=Clytia hemisphaerica|type=transcript|length=12297bp|location=Sequence derived from alignment at sc0001631:32508..44804+ (Clytia hemisphaerica)
TACAGGATAAACAGGATAAAAAAGTGATTTCATAAACAGCGTGACCATCG
TCGCAATACAAAATCATGGAGAAAATTGGTGTTGCTGTTTTAATGTTACT
CGTTTACTCCTCACTGGTCAAAGGACAACAGACGTTACACGATAACAGTA
AAATAGAATACACAACAAACAAAACGAAGATTTATTTGGCTGCGTTTTTC
TTAAATGTGGAGAAAGATACATACTCATTTCGAGCAGGAATGGAAGTAGC
AAGGAAATTGATAAATGAAGATGATCGAATTTTGAaagattatgaaattg
tgaTTCACTACCACAACTCGTTAGTAAGTGGAAACGCTCTCCTATACACG
CTTTCTTTAAAgacaaactataaaagaacatagccaaaatatattgagaa
caagttaagaacatgcaaaaaatatattgagaacaagttaacAGCGTGGC
AAAAGTATctagaataagttaagaacattttaaggactTGCAGATTCAAT
TTCTTAGCGAATtgaggaaaataagaacattataaaaacatttttttacg
tgaaactcaaaaggttaagaCCATCAAACGGCTTCAAATGTGTTGGTaaa
caaaaaaacgtgtagaccaTTTCACTGATACACTAAACTATGCTATAGCC
TAAGAAAGATTCCATTACGTGTTGTAAactatcccagctggcacacaacg
ttttttcaacgtttatctaacgttcacaacatccatataacgtcagATGG
ATGTTGAAACAATGCGTATCAATTGGGATGTGTATCTACATTTTGTAATG
TCTTCAACcaccaatttttcatagaacgCTTGGCCGACAGTGAGAGCTTT
GTACAAATTTATGGAGACAGGACCGGTTAAGCAAATATTACTGGGACCAG
CATTCAGTACGGTCAACAAGAGGATTATACCTTTCGTTACAAACCTTGCA
CTGCCACAGGTAGGTAAATAGGTTTTTCATCTTTCGCCATAGTCATGTAA
CTTAAAGGAAAATCTGCCAAAAATAAGTCAAATTATGCTAACAAGGTTTC
CACATTGTAGGCAAAAATCACGGGTAAAaagttgtagacaaatgaaattt
cagtgaaaaattatGAGagatagagcaaaatgactcttcaaagtgtctga
aaggggagggaatttaagaaaaacacttttgaagtcgttgcattgattTT
GAATTGCCTTTGAGGGAACcgcaagcaaaaaatcagcgttttgatactgg
tgtaagccagttaatcaagcccttgtggttagattgcagtgggtgacttt
gaaagactttggatgggtttggaaagcacccagaacctattgggaacttg
tttttgatcaatattgaagtattttgcaaacattgcagaagtctacaaac
cttttgtccatgattgaaAAAGACAGTTAATACTGTCTAAGCCAAGACTT
TCTGTAAACTGAATTAGTTATTACAACTATGAAATCCAGAGTTAATAAAT
TTCTATATATTTGTGATATTCATtatgtaatgttttatacggtaACACTC
AAAATAGCCCGGGTGCTTGCGactagttttattgtttggATTCAGAATTA
GTGGTACCCGGTAtatttttgggtgcttccgtataaaacattaagTCATG
GATATCACGCATTATTATCATCCTTAGGTTTCATTTTCCGCCCGGAAACG
ATTCAACGAGCGTCGTGAGATCGACGGACGTCTTGTTCCGACGCCGTTAG
AAGAAAAAAGATATCCTTATTTGGTGCGGACCACGCCCTCTTTTGTTCAA
AATAATTACGCAAGAGTTCGGGTCATCCNTGGTGCGGACCGCGCCCTCTT
TTGTTCAAAATAATTACGCAAGAGTTCGGGTAATCCAAAACCTTGGATGG
AGAAGAGTAGCGATTGTTTTCGATGACAAACAAAATTATGAGGTAAGTTG
TAACCACTGATTTCTAACAATTTGACTAGATCTACCATCATGGACAAAAT
TACGAGGTAAGCTGTAACCTCAGATCTGTAACAATTTGACTagatctaca
atcatggacaaaattatGAGGTAAGTTGTAACCACAGATTTCTAACAATT
TGACTAGATCTACAATCATAGACAAAATTACGAGGTAAGTTGTAACCACA
GATCTCTAACAGTTTGACTagatctacaatcatggacaaaattacGAGGT
AAGTTGCAACCACAGATCTCTAACAATTTGACTACCGTAGATCTATAATA
Aatctataataaattcttggatagataaatagatagatattttacgtgga
tagttCAGTAATCTAGTCTagtctttcaattgtttttgcAAAAAACACGT
CCACGGCCAGATGGCTtagctatctatgaactgaacggaacattggaagg
aacGAGGATTTGAACCGCAAAGCCCTGGTCTGAGACGCTGGCGCCTTTGA
CTACTTGGCCATCCTTCCTTTCGTATTAGCAAGGTTATGCACGGCTTTAT
TTTGACCATAAAatgcgataccgtaggcctgtacataacttgccaaagtA
AATCATGtaagtgaaatcttatgtacaggcctacgatatcgtattgaacg
gtctaaataaacacttgcttaacTTCGCTATTAGATTTTCCGTAACGTAG
AATTTTTAGGTACCAACcttgaataaaatgaaatatgTTCATCTTCTAGA
AAGTGGAGGATTTGACAGAGCAATTCAAACAAGCCAACATTGATGTTGTT
GCAACAGAAAGATTTGAGCCAAAAGGTTCTTATGAACATTTTGATGCTGT
TTATGATAATTTGAATGTGAGTTATTCTAATTTCACCATAGCGAACCgtg
gtgcagtggtagagcatctaGCTATGGttcacaaggttgtgggttcaacc
cattgagtttaaagcccgaagggctagagtagaatctctaacctttctca
ggcaagaaaaagtgaagccttaaaattacGCCgttttttgacgacagatt
gaatctagcaattcctttttttacgattgatattttttcgaaatttagcg
gtaaatagcggtttagtttcaatctgtcatttgtgtaaaaaccaggcgag
ccgctcaaggccttcaactttgttggcttcaaatcctaccaaagagattg
acttctagccttcggcttctacttcattggttcaacccccagccgggtca
taccaaagattctcaaaatagtACTTGTATAATGTGAGTTATAATTTCTC
CGAAAAAAAATACGATACACTTACAAACCTAGCGAACTGTGGTGCAGGAG
TAGAGTATCCGGCTACGGTTCACAAGGTTGTGAGTTCAAAAAATTCTCAG
Aatagtacttgatgcctctctgcttgatgctcagcaattaagagaaggat
caagggtaagtggagaaatccaaggagaaagagtggcgccctcccctatc
ttcgggtagatagctatcgaaagaggaaccTTTGGGTCGCCTCCCGACTG
CAGTCGCAGACTTAATACTACAAACATATACTAAAAACAAGGAGAATATA
TAAATACTTCCTCCTCCCATTAAGAcactaagtgatatcgccaatttttt
ttaattttggtgtatattttatttcattttcttattaGACGATCCTATAT
AAAGTTTAGGAGGCgggcgggataaatttgaaaacggcgGTTAGCACGGG
GCGGAGAAAGCAGTGACAGAGGTGCTTAAAGTTTGTTTCAAACTcaaccg
ccacttttttcccgtgaaccaccctgacgccctgactttttgcatatatt
tattttcccGCGTTTAGTGACCCTcaaaaggccggtctccactttcacgc
gacatgagcgaaaacttttattacatttttgtaAGGtaattggtcggttg
aaaaatgaagcaattccattagctgaagcaaaaaaggttaagaaaaacac
tGTCGGCCATTTCGcgtgaaagtggagaccggccttaacggACGATAGTA
TTGTTTATCATTTTTTCTAACTTAGGTAAGATCCTTTACCAGCTTTTTAA
CTGGTAAAcagttttccaagaaaacataaCGCTCAACTCAATCCTCTCTG
TATTTTAGAAATCAGATGCTCGTATTATCGTTGGTTTCTTCTTGACAGAT
GAAGGGGCCTGGGCTATGATGTGTGAGGTAATAAAACCTGTCTCAAAATA
ATCCGGCTAATTCGGCGCAGTAGCATAGTTTTAGGATCTAGAAGGTAAAA
AAGTTCTAATAAAGTCGAGAAtttagcctggaagccacttaacccctccc
aaatcgaaaaatccaatgaagcaaagttgaagtactgaaactgcaattct
cgcccgacctttaaattctaaaaaacgttaaaatacccaaaattgccaat
atatttcggagCTGATTGTAGAATACCTTCAACGCTAAAATATTTctcct
tttcaaacataattccaatttatatgctcgtaaatctggttttttggtag
ttttttattcaaatgccacaatttttattttgtgacgtaacgtcaaaaag
atgatgctcaattgtcattgaactcgttgtgtgacgtcaattttttgaaa
tatgtggCCTCCAtgaagctatatattcgaaaatattggacagcaaagaa
gccaatcaattgtcgctatttacgcgcgtcggataataaattgaatatat
tgtccgggggtagtgaaatatctacaaaatttgccttgtttgaGGGCAAA
tctgctctgtttgggggtaattatGAATGTCCGGGGCCTTAGATCTGTTT
TCCGGGAGGggggggtcaaaattcacacGATCCGGTTGGTGgggtaaatt
taaaaaatatgtgtTACCCTCCACCCcatatattcattttttttctggaa
gagcccattctttaaattctttaaatagACCATCTCTATACAACTTACAA
CTTATTTCgtcttttatatattttttttacaggCTTACNAAAAAATGTgt
tatcctccaccccctatattcattttctttcttaaagAGCCCAttcttta
aattctttaaatagACCATCTCTATACAACTTACATTTCgtcatttatat
atttttttacagGCTTACAAACGAGGCGTTTACGGGGCACGGTACACGTG
GTTTGTATCAGAGAGCGTAACCACCCTCTTGGGAACACGACAATTCCATG
ACGTCGATATTAATGCCACGTGTAATTACGCACACGTATTGAAAGCTATG
GATAAGAGTATATTTATCACGACTGTGAACTTGAGAACTGATAATGTCAA
ATCTATTGCTAACTTGGTGAGTGCTTGGCGAATGCCCCCCCCCTGCCCAG
CGGaggttttttcaaagaggcgccgaaatacaaagggtacaaaataacta
attactaattttggcgcccctttgctcttttacaccttagatttggcagt
ttttggccaaaaagagagaaaatacccaaAAGCGAATTAGTAATCGTTCT
TAACGTGTAGAAATCTCATCTTAGGGCTCTTTTATTAAAATGGGACCTCG
ATTCATGTTAAATATGCCTCTGGGATGCAAAATCTACCTAAAATACACGC
TTAAAGTCAGTAAAACTCCTGATTTCACGTGTTTTAATCATCGTCAAAAA
CACTCAGAAAATATTAAGTTAAAGTGCGcgcgaaaatcttttttttaaga
gTTGCGTGAAAATACAAGGGTCAAGCTGGATTCTTTACAAGctctttgat
gactctgttgatcgttaaatgttgagacaaatgtattcattactttttct
aaagaacgcgtcttccctattgtttagaaataaccaatcagctaagcatc
ttgtaaaaactccagctcatcccaaataAAAGGCGCGCAAAAATTAACGG
AATTAAGGTATGTATTTGAAATGCTTAAATTTTCTCTCTCAGAGTACATC
CTTCATTTGGCAGATGATAAAGAACCAAGATTTGAAACATATAATCGACC
ACAATACAACGCACCCTCACGATCCCGCCCCTACTTCCGGCCGCCCAAAT
ATACTTGGGGCACGTGCTTATGATGCGGTGTATACAGCCGCCCTTGCTCT
TGATCGTCTCATCAAAAAGAAAGGTATTCATAATTCCAAGTTTGGGTGAA
ATTCCATAAAGTTTAAATCTCcctccccagctggcacacaatgttgtttc
aacgtttatctaacgttcacaacgtccatttaacgttagattaacgttga
aacaacgttgtgtgccagctctCTCGTGACTAGAGAAGAATCTTCAGTCT
TTGGCagagaagaaaaataaagctttttagatTTAAGCCATGTCcgtttt
atttttcgaaattgccGATAAAATTTATTTCGATGCGGCGTAATTGAAAA
TTCGACTAATCCAGACGTGTTTTGTTACCTCGATGGACGAAAGAACTTGT
TCAAGCTCAGTTCATTGTAGATATGAGTGATCCTCTACATCCAAAATTAC
TCtaatgtactgaaaaaaatgaacaatgaACGATAGAATATGAgaaattt
ttcaggtttttcagGCTTAAGTTATGTATTTTAAGGGAAATCCGTCATTG
TGGATTCAGGTTTCGATTTTTAGCAGCTGGCATACAacgctgtttcaacg
ttcatctaacgttatatggacgttatgtgaacattagataaacgttgaaa
caacgttgtgagCCATCTGAGTTAcaaaaatcgaacgtttgcttccataa
tggtagAAATCAAGTAGATTACTTAATTGAAAAtctctaaatttattttt
ctatagGTAACTCGTCCTTATTGACCAAATATGGTGATCGTAAAAAAGCA
TTGGAAATCACACGAGAATTGCTCAACTCAAACTTTGAAGGCATTACTGT
AAGAAAATTGGTTACacagcattttcaaattttcaaataaggATATGTAG
TGgaatctctttaactcgaacctctataacacgaaagtctccttaactcg
aacaggtattatggtcccttcagcttcagaacaaatttgtgttccccgtg
cgggtTCGAGCTATGAAGACACCACTGTAGCATCTTTTCCCGTTCCCGTG
CCGCgtgagttttttgttttgagaatACACcatttcgaccgtagccacca
aatTTTCACAAAGgatttttttgtccattttataccaccctaaaaccgtc
ccagtctttttttcgcacctatagacaatagaaaagtgtgtaaaaaaaag
attggatcgagtttaaggAAATAGTTAGATAATAAAGTGGTACTCGCCTG
ACCGCGTGACTACGGTCCAAAAGGTGTATTTCATTTGTTAactccccggg
gggggggggggggggggggggggggNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcactgggtttgcggactgacggtat
gtgcgggccaaaaattggcttttaaaaatGCACCCTTATAGCGCAGCAAA
AATctgtgaaaatcatacccttaaagtgcattttcccccaaattttcgat
ccctttcgtgcaaaaaatggtcaaaattagcctccgtctcggaagaggac
tgggcccgaatttgcggacattttgacagtttcactttcgttttcggcta
tacgacagcgttttcaggCAGAAatcagaggaaatctgtgaaattatggc
agggaatgttatcctatttttccagtgtttctcaagattgaagcaagatt
attgttctagaaagttcataaaggcctaatagttccagattagtatgatt
tcatcagaaaaaaacatttacaccaaagctccNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNgaaggctaccaaaaatagcaatgtcctccatca
gaacaactttaacataagggacaaggacagtcaagaagtctactttgttg
aaaatttgcacaaaacacttagaaaatggtactatgaaAACCCATTCTAT
ACTCGTAAAGGATAGTTGAACGATCAGCAGTTGAGaaggttgattaaaat
agaaatcaaagcacacataataaagtataccatatatatttgtccagaaa
aaactggcatgttgtttgctttgttttggtgtttaaaaatatgtacttat
cagtcctaaaaaatacaaatttgaatataatgagggcaatgagtctggtt
aaatgttactatatttacaagaaaggattactgaaaaaatactactgtag
ataaactaaactcaaaaactaaaactttaccataaatttacattacgaca
ttttaaaattctttctttaatagcaacaaagaaaaaaatatggctcaaag
ttttaaaaatagagctagtcagagcttcaattcagtaggtatagagcttt
caaaatttgaaaacagacactgcattgggcactacaagactagagaaaga
tgtcaaccatccacacgtacacggttttttcgattcatgaaaaaaataaa
gtatttatcaaaaaaaggttctcttttttttggtaatcaattccaaccaA
CAACAATCAAtgtaacagttttttgaaaaccatcccacagtgtaaacatt
accaaccaacaaaacccacaccgccaaaattgtaaaaataagtcaatata
atttctatcaacaatttctcgtaaaatgttttttttccaacattctgatt
accaatcatggctggaggcatcatgtgtagagtgactgtgtggcatttca
ttgcttttaatgaccatgataccaaacatcaaccaaataaaactgacgcc
aagtcaaatctgtcaattaaaaatttccatgaaaattataatcaaaactt
atctcgtaaaatgcttttttcaacattctggaagTGTTCAAAGTCaaagg
tatcatatgtagagccaagcaatacatgaaaagtcatttgctatctcatt
tgccatgagatatatgagtctacaaatcaaacaaaaaccaacaaatcatg
tctcttcactttcatgtcacatcgtgtttatatggggtatcagaaagcca
atccacaagaagagccatcttcctttattatggagtgttccgaaactatt
ggtaggttgtttggaagtaaagaaacccacacagtttgttttattttgaa
gatttaacttgaaaacaaacttcatctttccagcagaaactcatgtttca
acctgacataacattggtcagtcggatctgctactaacatgtaatagttt
tattataaccgagcttgagaatccgtacgcagcacttgtaacatgtatta
tgtgtataattatgtcagtcgacttgaatcatgatacattactcagattt
cactggatgcattttcgctgtgaaattatccgcaaaattcgCTGACCGCG
Tttcgagacggaggctaattctagcatttttggtcaaagtatctagattt
ttcaagaattttctgaaatttctacccttacagtgcatctctagtttttc
cgacccttacagtgcattttaaacatattggaaaaggtaccctaaggacc
cgcacatacccgtcggtccttttgcccagccgccccccccccccggggtt
aaCTCCACTTTGTAAGACTAAGGGGCGAGTCTCCTTAGTAGAGTAAGAGA
TGATTTTTCAATAAGTTTTATCTACTTTTTACTATATGCAAATGTATTTT
TCTCAACATTTTCCTATCACCAGGGGTTGGTTAAATTTGGAGGACCAACC
AAAGACGATAGTTTAGGTCACGTCATCATTAACCAATGGAAATCGCTGCT
TCCTTCACCGTTCGGTAAATTAACGCAAGTGGCGTATTTTAATCCAGCTG
AAAACGAGATGGATATCAAGCCAATTAATGATACCATATTCACAGGTTAG
TTtgtgtttttcatttgaaaggttttattttgtgttcccgtttcatatta
gaCACATATTTCTTACCAGGACAGTGTCCACCTATTGTTATAATATGCAG
GTTAGTTTGCGTTCGATTTTCAGAGCCTAAAACTATGGATCGTAAAAGGA
TTAAGCAACAAGCCTTAAGCTGTTTGACTAAGCTCTCATTTAATCTATAA
AACGTTTTAAACGGAACAAATTAACTAAAGGTTAATAGCCTCCCATTAAA
AACCCTAGATTATACCGCCAGTAGATagaaaccaaaaaaaaagataaaag
actatgtaagataaaataaaaaataacaagaaattaaaaaaaaaaaaaaa
tgagataAGAGCTAAGGGAGCAAGCAAACTAGAACAACAGTCCCCCAAAA
CGGTCGGTGTCACGAATGAAAGCTCTCATTTCTTGGACGCCCGCAATATT
ATGTCTTGCTTCCGTTTGATAAAGAGTATAAACGAGCATACCCTACGCTT
TTGAGATCTGCAGAATTATACCTAAACCGTTTGGAAAACCCACATTTTTG
ACCCGTAAAATCGAAAGCGGTCAAAGCACTGATTCATCGTCCTAGCTCAT
TTCGGGTCTAAATAAATTAAAACTAACAGTCTCCATCACAGAattgaaaa
tattgttgaaaaagTTGGCAaatcattcaaaagaaaaatattatacctaa
aattaaaaaagggcTAAAACTTTTGACAGAATCTAAATCAGATAGCAATT
tttgctcgttgaaaagatatccCGGAGTGGAAAAATGACAAATGAAGATT
AAGTACATCAACTTCATGTAGAATCGagctatgatcttcatttttgtatc
agaaactcctcaatcttagaacgtcataaatgcgctaaaattttaaagaa
atattaattatgttaaaaaataaagccTTTTTTTGttccgctgcaaatta
tattgggacaaactttacaaatatcttttctttcTAGATAACATCCTAAG
GTTAGATGGTATACAGACAGCACGGATCGAATTATACAGTTCACGGCACG
TTTTGTACATCATATGGACGTTAATTGGACTTTCAGTTTTACTGGctctc
actttttttatcattaacATGAAATATCGAACAGTCAGGTTAGAACATGT
Ttaatctttataagaatatactctgtaagaatattcatgataaaatttgc
gaaaaactTAAAACATCATCCTTATaaaatttggcaactgaacctaaaat
TGAACTTTTCAGAGCGACCAAACGGAGCAGTTTCGTTCTGCTAtattgta
acgtcttctttttttgaacgTTGACAcagtgtttcggaaccgtttcgttt
cggaacgatacggaaccatgacgtctgaacatggtctttgTCCAAGCAAT
ACTTTCCtcaaaaatgttatattttttcttgaaagatGTATTTAGATGTT
AAATTTAAGTTTGATTTCTATGCTAACCTTTATGAATGCCTTAAGaatag
gggccgtccacatagtacgtacgcactaaaatgtcgaaaatcgagtaccc
cctccccccaagcgtacgcaaatagctataccccctctggtaagtacgta
ctttttcattccccccccccccccCGTTGAAGAAAATTTCGAATTCAAAT
CGTTTGGTTGGGACCTTTATTTCATACATGAAACTCAATGTTTATCAAGA
AACTTTTTCTTTTCCTTGATGCGTATAACAAGGGTATAAGTCGACAAAAA
AAACAAGCGAAAAAGGGCTATGAAAAAATTTTCTCTGCGTACGTACATTT
TTCTTTGACCCCTCCCCTCCCCCTGTACGCAAGCACATGCTTTTGAGAAc
cccccccccccttagtgcgtacgtactatgtggacggccccatattccaa
aatcaatttcctgaaaaaagttCAGAATAGCCATGCTTAAATGAAATGTC
ACCATTCTCATATAAAAGACGTGCAGACCACAAGCCTTAATTTGTTCATT
AATTTTGCCGAAGGTTGGTTTAAACCAGTTTCTGTGtcagtttctttgtt
tttattgccAGGCCAACAAAGGACAAAAATAAGCATTAGTGAAGCCTAGC
GAAATTTGGATTCTAGAGACCGTTTTTGATTACCTTTGTAATGTTTTTCG
CAAGCTCagcattttttttcatagctatatttaaatatctttaacCTAGC
CTCAACTGATTTATTCCACCCTCATAGATTAATCAAGATGTCAAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022216XLOC_022216Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037444-exon-sc0001631-1491911889:32508..32830TCONS_00037444-exon-sc0001631-1491911889:32508..32830Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:32508..32830TCONS_00037444-exon-sc0001631-1510915933:32508..32830Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:32508..32830TCONS_00037444-exon-sc0001631-1575043694:32508..32830Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:33332..33466TCONS_00037444-exon-sc0001631-1491911889:33332..33466Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:33332..33466TCONS_00037444-exon-sc0001631-1510915933:33332..33466Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:33332..33466TCONS_00037444-exon-sc0001631-1575043694:33332..33466Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:34185..34449TCONS_00037444-exon-sc0001631-1491911889:34185..34449Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:34185..34449TCONS_00037444-exon-sc0001631-1510915933:34185..34449Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:34185..34449TCONS_00037444-exon-sc0001631-1575043694:34185..34449Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:35207..35323TCONS_00037444-exon-sc0001631-1491911889:35207..35323Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:35207..35323TCONS_00037444-exon-sc0001631-1510915933:35207..35323Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:35207..35323TCONS_00037444-exon-sc0001631-1575043694:35207..35323Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:36616..36684TCONS_00037444-exon-sc0001631-1491911889:36616..36684Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:36616..36684TCONS_00037444-exon-sc0001631-1510915933:36616..36684Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:36616..36684TCONS_00037444-exon-sc0001631-1575043694:36616..36684Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:37620..37823TCONS_00037444-exon-sc0001631-1491911889:37620..37823Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:37620..37823TCONS_00037444-exon-sc0001631-1510915933:37620..37823Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:37620..37823TCONS_00037444-exon-sc0001631-1575043694:37620..37823Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:38450..38630TCONS_00037444-exon-sc0001631-1491911889:38450..38630Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:38450..38630TCONS_00037444-exon-sc0001631-1510915933:38450..38630Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:38450..38630TCONS_00037444-exon-sc0001631-1575043694:38450..38630Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:39314..39405TCONS_00037444-exon-sc0001631-1491911889:39314..39405Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:39314..39405TCONS_00037444-exon-sc0001631-1510915933:39314..39405Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:39314..39405TCONS_00037444-exon-sc0001631-1575043694:39314..39405Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:42381..42552TCONS_00037444-exon-sc0001631-1491911889:42381..42552Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:42381..42552TCONS_00037444-exon-sc0001631-1510915933:42381..42552Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:42381..42552TCONS_00037444-exon-sc0001631-1575043694:42381..42552Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:43545..43695TCONS_00037444-exon-sc0001631-1491911889:43545..43695Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:43545..43695TCONS_00037444-exon-sc0001631-1510915933:43545..43695Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:43545..43695TCONS_00037444-exon-sc0001631-1575043694:43545..43695Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1491911889:44785..44804TCONS_00037444-exon-sc0001631-1491911889:44785..44804Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1510915933:44785..44804TCONS_00037444-exon-sc0001631-1510915933:44785..44804Clytia hemisphaericaexon
TCONS_00037444-exon-sc0001631-1575043694:44785..44804TCONS_00037444-exon-sc0001631-1575043694:44785..44804Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001631supercontigsc0001631:32508..44804 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.159325	0	0	0.346211	0	1.01464	0.0235413	3.26383e-07	0.109194	0	0	1.99996	0.710287	0	4.29557e-06	0	0	0	0	0	0	0	0	0.200478	0.0860638	0	0	0	0
Blast
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BLAST of TCONS_00037444 vs. Swiss-Prot (Human)
Match: GABR1 (Gamma-aminobutyric acid type B receptor subunit 1 OS=Homo sapiens GN=GABBR1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.768e-21
Identity = 97/379 (25.59%), Postives = 169/379 (44.59%), Query Frame = 1 
Query:  616 RTAPSFVQNNYARVRVIQNLGWRRVAIVFDDKQNY-EKVEDLTEQFKQANIDVVATERFEPKGSYEHFDAVYDNLNKSDARIIVGFFLTDEGAWAMMCEAYKRGVYGARYTWFVSESVTTLLGTRQFHDVDINATCNYAHVLKAMDKSIFITTVNLRTDNVKSIANL-STSFIWQMIKNQDLKHIIDHNTTHPHDPAPTSGRPNILGARAYDAVYTAALALDRLIKKKGNSSLLTK---YGDRKKALEITRELLNSNFEGITGLVKFGGPTKDDSLGHVIINQWKSLLPSPFGKLTQVAYFNPAENEMDI----KPINDTIFTDNILRLDGIQTARIELYSSRHVLYIIWTLIGLSVLLALTFFIINMKYRTVRLIKMS 1725
            RT PS   +N  RV++ +  GW+++A +    + +   ++DL E+ K+A I++   + F     +        NL + DARIIVG F   E A  + CE YK  ++G +Y WF    +        F   D +  C    + +A++  I    V L   N +SI+N+ S  F+ ++ K   LK        HP +       P      AYDA++  ALAL++     G S +  +   Y ++    +I R + +S+FEG++G V F        +   +I Q +       G   ++ Y++  ++++      K I  +   D  L    I+T R   + S+ +   +  L  L ++LA+     N+    VR I+ S
Sbjct:  285 RTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEAGIEITFRQSF-----FSDPAVPVKNLKRQDARIIVGLFYETE-ARKVFCEVYKERLFGKKYVWF----LIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKR--LKR-------HPEETGGFQEAP-----LAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDA--SGSRMAWTLIEQLQG------GSYKKIGYYDSTKDDLSWSKTDKWIGGSPPADQTLV---IKTFR---FLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNS 625
The following BLAST results are available for this feature:
BLAST of TCONS_00037444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GABR15.768e-2125.59Gamma-aminobutyric acid type B receptor subunit 1 ... [more]
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