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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037442 ID=TCONS_00037442|Name=TCONS_00037442|organism=Clytia hemisphaerica|type=transcript|length=915bp
CGGGGTCAATAGAAAACCAATATGATTCGTATGATATCAATATTTACAAT
GTAAGTATGTTTTAGAAGATTACTCCAGTTTAGTTTTAAATTCACTCGAA
TAATTTTAATTCGAAGAACACCTAATTGTATGGTGTTtatgttatatttt
tgagagtatcttaagtaaaatttaatAATGTAATCAGGGGGTTGATGCCA
GATTCGCTTTACggaatcaaaacattcaaaaccagTTTTCAATTTCgtgg
ttttattttatttctttgagtGTTAAAGTTGGAGTGGTGGAAGTGATAAG
CTGATCTTGAGTCTGGTGTAAGAAAAATGGAAAGGAGAAACTTAATTCAA
CCACAAGATCATGATGTGTCGTGATGCTGTATCATAACATAAACTCCACG
AAACCATTTCTCGTCAAGTAATTATCAAGGGTAAGGTTAAAAGACTTCAT
CAAGCACTGAAACTGTACAACTCTCTGCaccataaagaaaaaattcagat
AGCCTACACTACATGATCTGACAGACAGAACGAGAAAGgGAACACCATGA
ACTGACACGATTTTTGAagaaagctgattggcttatGATCCTTAAATCGA
GTCATTTGGCAAGTGACGGTTACtgatttctttgatgttttgagTGTTTG
TTTCAAGAGCTAAAAGTTGCTTGAAATAGGATACTGATCTTGGAATTTTA
TAATAAAGAAAGTTTGACCAAAGTTTAACTTAATTGACTAATACTCTTAA
GTTTTTGCCCTCATACATTGTATACATagcatttgtatttttttctgtat
ttttttacCTTGTAATTAGATTATCTAAATATTATATTTACTTTATCTTA
TTTAATATGAATTTTTAGTTCTTCTAAAGATGAAATAGATCAGTAAcatg
aaatgtaaaaaaaaa Run BLAST on NCBI transcript from alignment at sc0001630:31161..32997- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037442 ID=TCONS_00037442|Name=TCONS_00037442|organism=Clytia hemisphaerica|type=transcript|length=1837bp|location=Sequence derived from alignment at sc0001630:31161..32997- (Clytia hemisphaerica)
CGGGGTCAATAGAAAACCAATATGATTCGTATGATATCAATATTTACAAT
GTAAGTATGTTTTAGAAGATTACTCCAGTTTAGTTTTAAATTCACTCGAA
TAATTTTAATTCGAAGAACACCTAATTGTATGGTGTTTATGTTATATTTT
TGAGAGTATCTTAAGTAAAATTTAATAATGTAATCAGGGGGTTGATGCCA
GATTCGCTTTACGGAATCAAAACATTCAAAACCAGTTTTCAATTTCGTGG
TTTTATTTTATTTCTTTGAGTGTTAAAGTTGGAGTGGTGGAAGTGATAAG
CTGATCTTGAGTCTGGTGTAAGAAAAATGGAAAGGAGAAACTTAATTCAA
CCACAAGATCATGATGTGTAAGTATTACTTCACCCATTTATATCAACAAA
TGAGTCTAGTTAGTGCTATTTCTATCTATCCTAAACTAAGGGTCGATCAG
ACAACACTCATTTAAGGATTTTTTTGTATCTTTAATTTGTCATGTCATTC
ACCCAGATCAGAGGTATATTTTCTACTTTTTTTTACTTTTTTGTAATAAT
GTTGTTTTCCTTTGCTGTTCATTTGTTGTCACAATGTTTGACTCTTTTGT
CTTTCTACACTACAGGTCGTGATGCTGTATCATAACATAAACTCCACGAA
ACCATTTCTCGTCAAGTAATTATCAAGGGTAAGGTAAGGGAATTATCTGC
TTATTTGTATGCTACTTTTTTTAAAAGAACTATAAGCTGGATAATTTGCT
ATTTATGTAGGTATTTCAAAATATTTTTTTTGAGCAATGAAATGTTTTTG
GCAAAGCTTTCTTCTCAATTTTTGACTATTCTGAGATATGATTAAAATGA
ATATCTTTGTTTGTGAATGAATGATGGAGCAATATACATCAGTTTAGTTT
ATTTTTTATACAGGTTAAAAGACTTCATCAAGCACTGAAACTGTACAACT
CTCTGCACCATAAAGAAAAAATTCAGATAGCCTACACTACATGATCTGAC
AGACAGAACGAGAAAGGTATTTATCACAGAATTCAATTAAATTTTTTCAA
CTATTCCTAGTCCATTTGCTTTACAAGGTAACCTTTTCTCTCGAAACTAG
AGATCAAATGTATATAAAGTGATTTTACTAAACTGTTGTTTTATAGCCAA
TGTTTTGTTACTTTCTGATGGGGTCGATTATTTTGATTATTTTGGACCAT
TTTCAGGGTAGAAAAGAGAAAATTTAAAAATTTTTCGGCTACTTTTATTA
ATTTTTGCCACTCCAGGCCGAAAATGGGAGATCTTTTAATTTTTTGTTCT
GACAGGGTTCCAATTTTGCCAAAAGTTCACATCTGACAGGATCAACTTTC
CAAACTCCAGTGGTACTTCCCCGTCGGCCGTCAAGGATTATTCGTGATAA
GATTCATATTTATTTTAGAAAGTTTGACCATATTATTATCGATTTTCAAT
TTTTCTTCAGGGAACACCATGAACTGACACGATTTTTGAAGAAAGCTGAT
TGGCTTATGATCCTTAAATCGAGTCATTTGGCAAGTGACGGTTACTGATT
TCTTTGATGTTTTGAGTGTTTGTTTCAAGAGCTAAAAGTTGCTTGAAATA
GGATACTGATCTTGGAATTTTATAATAAAGAAAGTTTGACCAAAGTTTAA
CTTAATTGACTAATACTCTTAAGTTTTTGCCCTCATACATTGTATACATA
GCATTTGTATTTTTTTCTGTATTTTTTTACCTTGTAATTAGATTATCTAA
ATATTATATTTACTTTATCTTATTTAATATGAATTTTTAGTTCTTCTAAA
GATGAAATAGATCAGTAACATGAAATGTAAAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037442-exon-sc0001630-1575043694:32631..32997 | TCONS_00037442-exon-sc0001630-1575043694:32631..32997 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1575043694:32315..32382 | TCONS_00037442-exon-sc0001630-1575043694:32315..32382 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1575043694:31982..32084 | TCONS_00037442-exon-sc0001630-1575043694:31982..32084 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1575043694:31161..31537 | TCONS_00037442-exon-sc0001630-1575043694:31161..31537 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1510915933:32631..32997 | TCONS_00037442-exon-sc0001630-1510915933:32631..32997 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1510915933:32315..32382 | TCONS_00037442-exon-sc0001630-1510915933:32315..32382 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1510915933:31982..32084 | TCONS_00037442-exon-sc0001630-1510915933:31982..32084 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1510915933:31161..31537 | TCONS_00037442-exon-sc0001630-1510915933:31161..31537 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1491911889:32631..32997 | TCONS_00037442-exon-sc0001630-1491911889:32631..32997 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1491911889:32315..32382 | TCONS_00037442-exon-sc0001630-1491911889:32315..32382 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1491911889:31982..32084 | TCONS_00037442-exon-sc0001630-1491911889:31982..32084 | Clytia hemisphaerica | exon |
| TCONS_00037442-exon-sc0001630-1491911889:31161..31537 | TCONS_00037442-exon-sc0001630-1491911889:31161..31537 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001630 | supercontig | sc0001630:31161..32997 - |
Blast
The following BLAST results are available for this feature:
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