|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037440 ID=TCONS_00037440|Name=TCONS_00037440|organism=Clytia hemisphaerica|type=transcript|length=517bp
tttaaaagaactataAGCTGGATAATTTGCTATTTATGTTAAAAGACTTC
ATCAAGCACTGAAACTGTACAACTCTCTGCaccataaagaaaaaattcag
atAGCCTACACTACATGATCTGACAGACAGAACGAGAAAGgGAACACCAT
GAACTGACACGATTTTTGAagaaagctgattggcttatGATCCTTAAATC
GAGTCATTTGGCAAGTGACGGTTACtgatttctttgatgttttgagTGTT
TGTTTCAAGAGCTAAAAGTTGCTTGAAATAGGATACTGATCTTGGAATTT
TATAATAAAGAAAGTTTGACCAAAGTTTAACTTAATTGACTAATACTCTT
AAGTTTTTGCCCTCATACATTGTATACATagcatttgtatttttttctgt
atttttttacCTTGTAATTAGATTATCTAAATATTATATTTACTTTATCT
TATTTAATATGAATTTTTAGTTCTTCTAAAGATGAAATAGATCAGTAAca
tgaaatgtaaaaaaaaa Run BLAST on NCBI transcript from alignment at sc0001630:31161..32278- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037440 ID=TCONS_00037440|Name=TCONS_00037440|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at sc0001630:31161..32278- (Clytia hemisphaerica)
TTTAAAAGAACTATAAGCTGGATAATTTGCTATTTATGTAGGTATTTCAA
AATATTTTTTTTGAGCAATGAAATGTTTTTGGCAAAGCTTTCTTCTCAAT
TTTTGACTATTCTGAGATATGATTAAAATGAATATCTTTGTTTGTGAATG
AATGATGGAGCAATATACATCAGTTTAGTTTATTTTTTATACAGGTTAAA
AGACTTCATCAAGCACTGAAACTGTACAACTCTCTGCACCATAAAGAAAA
AATTCAGATAGCCTACACTACATGATCTGACAGACAGAACGAGAAAGGTA
TTTATCACAGAATTCAATTAAATTTTTTCAACTATTCCTAGTCCATTTGC
TTTACAAGGTAACCTTTTCTCTCGAAACTAGAGATCAAATGTATATAAAG
TGATTTTACTAAACTGTTGTTTTATAGCCAATGTTTTGTTACTTTCTGAT
GGGGTCGATTATTTTGATTATTTTGGACCATTTTCAGGGTAGAAAAGAGA
AAATTTAAAAATTTTTCGGCTACTTTTATTAATTTTTGCCACTCCAGGCC
GAAAATGGGAGATCTTTTAATTTTTTGTTCTGACAGGGTTCCAATTTTGC
CAAAAGTTCACATCTGACAGGATCAACTTTCCAAACTCCAGTGGTACTTC
CCCGTCGGCCGTCAAGGATTATTCGTGATAAGATTCATATTTATTTTAGA
AAGTTTGACCATATTATTATCGATTTTCAATTTTTCTTCAGGGAACACCA
TGAACTGACACGATTTTTGAAGAAAGCTGATTGGCTTATGATCCTTAAAT
CGAGTCATTTGGCAAGTGACGGTTACTGATTTCTTTGATGTTTTGAGTGT
TTGTTTCAAGAGCTAAAAGTTGCTTGAAATAGGATACTGATCTTGGAATT
TTATAATAAAGAAAGTTTGACCAAAGTTTAACTTAATTGACTAATACTCT
TAAGTTTTTGCCCTCATACATTGTATACATAGCATTTGTATTTTTTTCTG
TATTTTTTTACCTTGTAATTAGATTATCTAAATATTATATTTACTTTATC
TTATTTAATATGAATTTTTAGTTCTTCTAAAGATGAAATAGATCAGTAAC
ATGAAATGTAAAAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037440-exon-sc0001630-1575043694:32242..32278 | TCONS_00037440-exon-sc0001630-1575043694:32242..32278 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1575043694:31982..32084 | TCONS_00037440-exon-sc0001630-1575043694:31982..32084 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1575043694:31161..31537 | TCONS_00037440-exon-sc0001630-1575043694:31161..31537 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1510915933:32242..32278 | TCONS_00037440-exon-sc0001630-1510915933:32242..32278 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1510915933:31982..32084 | TCONS_00037440-exon-sc0001630-1510915933:31982..32084 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1510915933:31161..31537 | TCONS_00037440-exon-sc0001630-1510915933:31161..31537 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1491911889:32242..32278 | TCONS_00037440-exon-sc0001630-1491911889:32242..32278 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1491911889:31982..32084 | TCONS_00037440-exon-sc0001630-1491911889:31982..32084 | Clytia hemisphaerica | exon |
| TCONS_00037440-exon-sc0001630-1491911889:31161..31537 | TCONS_00037440-exon-sc0001630-1491911889:31161..31537 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001630 | supercontig | sc0001630:31161..32278 - |
Blast
The following BLAST results are available for this feature:
|
