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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037438 ID=TCONS_00037438|Name=TCONS_00037438|organism=Clytia hemisphaerica|type=transcript|length=1037bp catAGTAAAAGTTTAATAAAATTATTTGACGCCTGCTGGACGTTTGCATA TTATggtatttctgttttccttaaAAAGGAAAATAGATTGGTGCTGTGCA AAATTTACTGCATGGTGTTACTATTTGGTTGTTGAATGGTCTGCATGGTG GTACTATTTGGTTGTTGAATGGTCCTTTGGAAATACTAACCAAGGCAACG AAGGAGTATGTGTCCGTCATGCCATTGCAACTGCTGTgcaccaatttttt ttcaaccaagGAATCATTACTGATCGAAACTTCTTGCTAGGAGATTCTGT TAATAAGTTGGAAGGGACTAGTGGAACAATGCCAATCGTTTATGATGGAT GGAAGTCAAAATGTATGGATCAAGATTCCAATTTGTATTACGATTTTCAT TGCAATGTAGAAAAAGTCGAAGATAAAAATGACATATCAAAAGCTTGGAC ATCCCTTCAAGAACGTAGCAAACTAACAATAACATGGAATCGTGTAAAAA GGAGAGTCATTTATGCTTCATATATTTGTCTGGCGAATTTTTTATGTGTG ATATATGATGATTGTGGTctggagaaatttttttcaattcattctCCCTT GGTTATAGTCTTGTTCTTGGTTATCACCATTTTGGCTCTTGATTACAAAT GGCCTTTCATACATCTTCTAGAATTGCCTTTCTTACATCCTAATTTCTTG AAAGATAGAAGAGCTTTGGACCAATACTTGTTAGTATATAAAACGGACGT TTCGAATCACAGTCTTCACTGTGTTTACATCAGGTCAATTATCAATAGCA ATGGGGGAGAATATAATTGTATCAACAGCTGGGGAAATAAACAACGTTAC CCTCGGATCCCAGTGGAGCAAGAGGGAAACGAACTCTGGAGAGTCAAAGT TCATTATGTTAGCAGTTCTTCTAAAGGTAAAACGTGAATTTTATCTTTCA CCTGCTTAAAGAATTCTTGTTTTTGCTCATTTAGATCTCTTGTTGAAGAG AACATCTATAACATTTAGATTGTTTGCCTAATTTCCT Run BLAST on NCBI protein sequence of TCONS_00037438-protein >TCONS_00037438-protein ID=TCONS_00037438-protein|Name=TCONS_00037438-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MVFLFSLKRKIDWCCAKFTAWCYYLVVEWSAWWYYLVVEWSFGNTNQGNE GVCVRHAIATAVHQFFFNQGIITDRNFLLGDSVNKLEGTSGTMPIVYDGW KSKCMDQDSNLYYDFHCNVEKVEDKNDISKAWTSLQERSKLTITWNRVKR RVIYASYICLANFLCVIYDDCGLEKFFSIHSPLVIVLFLVITILALDYKW PFIHLLELPFLHPNFLKDRRALDQYLLVYKTDVSNHSLHCVYIRSIINSN GGEYNCINSWGNKQRYPRIPVEQEGNELWRVKVHYVSSSSKGKT Run BLAST on NCBI transcript from alignment at sc0001630:6392..12245- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037438 ID=TCONS_00037438|Name=TCONS_00037438|organism=Clytia hemisphaerica|type=transcript|length=5854bp|location=Sequence derived from alignment at sc0001630:6392..12245- (Clytia hemisphaerica) CATAGTAAAAGTTTAATAAAATTATTTGACGCCTGCTGGACGTTTGCATA
TTATGGTATTTCTGTTTTCCTTAAAAAGGAAAATAGATTGGTGCTGTGCA
AAATTTACTGCATGGTGTTACTATTTGGTTGTTGAATGGTCTGCATGGTG
GTACTATTTGGTTGTTGAATGGTCCTTTGGAAATACTAACCAAGGCAACG
AAGGAGTATGTGTCCGTCATGCCATTGCAACTGCTGTGCACCAATTTTTT
TTCAACCAAGGAATCATTACTGATCGAAACTTCTTGCTAGGAGATTCTGT
TAATAAGTTGGAAGGGACTAGTGGAACAATGCCAATCGTTTATGATGGAT
GGAAGTCAAAATGTATGGATCAAGATTCCAATTTGTATTACGATTTTCAT
TGCAATGTAGAAAAAGTCGAAGATAGTAAGTAATCACCAAATTTGGTGTT
TTATACATGATTCCATGTCAGAATTCAAAGTTCCTTCTGATGCTTGGGTC
TAAACGAAATAGGAAGGCTTAAAAACATCCAAAAAATGGTCGGTTGTACA
CTGTGTTCCTGAAGGGAGAACGCTGCGTTGATTTGCCTTGTAAATCTCAT
AATCTAAGTTTTGGTGTTCTGTAGGATTTAAGCTTTTAATTCAATTTGAG
CATCACAATCAGAAAAAGCAATGAATTTTGATATGAATTCATGTGTAAAA
AATCTAATTTGATCAATTTGTTGCAAAATTACGAGTTTTTTTAAGTTTTG
CCTGGAAAGGCTTGTGATGACGTCATTCAAGAAACTTTCAATGTCCATAA
CTTTTGATGGGAATATTTTCAAGGCATACTTTATACCTCAATTTTCATCG
GCATTTCATGCTCTTTCTGCTGGAACCCTCATATTTTGAATATTTTCAAA
AAAAAGTTTTTTTGCCCAGCCACCTGATGACGTCATCTGGCAGGTGGCCA
GGTGGCAAAATTTGGTGTTACTGTTTGAAATTAAGTTTTGAAGCCTCTAA
GGATCATATTTAATGCTTCTATCACCATCTGAAGTATTTTTGTGCTAGCA
CACCTCACTATAGCATTCACTAGCCAAAAAGGGGAATTAAATTATTAGAA
ATTTAACAATGATATTTTTTGACCTACCAGTTAGTTCACTGGCCATGAAG
GGAAAAAAATTATTAAAATTTTAAGTTTAAATTTTTCTTTATAATAGTTA
GTTGGTTAGTTGGTTAAAGTTGGTTAGTTGGTTAGTTAGTTAGTTTGTCA
TTTTCTCGAGTTTAGTCACTTGTTACCTTTTCTTGAGATTGACTCGTTTA
ATTTTTCTCACGAAGATGCATACCGTATTACTTCGAATAAACTACCCTTA
TTGCATACGCCCTTTGATAAACGCTCCTCCTAAATAGAAAATTATTTAAT
AAACGCCCCTCAAATAAACGCCCCCTTCAAATGAACGCCTAAACTTGTCA
CTTTAATAATTCAATACCAGTGTTGATTGGGTTTGAAAAGGAAGATTTTA
GTCATTTCTTGTAACCAGAACAGTTTTCGATGCAATTTTAGTCGTTGAAC
CAAAGAAATTTTGCATTAAAATTCTGATAAAGAACTCAAACAAAGGATAT
ATTGTGCTCTAAATATTCGACTGTAGACTAAAACAATTCAATAAACGCAC
CTTTCTTTTAAACGCCCCCTCGAGAAAAACGCCCCCCCCCTAAAATCGAA
AAAATTAAATAGACGCCCCTGGTGTTTATTCGAAGTAATACGGTAACCGT
AAACCCTTGAATGTGGTGAAACATGACATTCGGGAAAAGGATTTTGGGCA
AATTTCAGCCAAAAAACGGCTAAAAAAAGGGTTTCTTGGACTTTGTTAAA
AATTGGATCNCCAAAAAACGGCTAAAAAAAGGGTTTCTTGGACTTTGTTA
AAAATTTTTTTCTTTGCATGAAAGTAGCGTACCATCATTGGTAAGAGATG
CAGATGGCTGAAGCAGATTTTCTCAAAAAAAAATTTTCGCCTTAAAAAAG
CAAATCTTTATCCATAAGAATCACTATTTATAAGTATGGATCAATATTCT
TAACGTAACTACTCGAGTTCTAAACAAGATAGATATATTTTTGCTCTAAA
AATTTGTAATTTCAAAGAATATTTGTGCTTAGGCATGAAATATTGATTAC
TTGATACACCCCTGCCTCTGTGACCCAGTGGGATCCACCCCACTCGTCAC
CCCAGTGAAAAATATTCCCAAAAATCGTCCATTTTTTCACCCCAGTAGAT
AAATCACTCTTCCCACTGGAAAACTGTAACTGAAAATGACCCATTGAAAG
ATACGAAGAATTCGCACATACCCCACTCAACATTTTATAATTTTGACCTA
CCCCGGTAGAATTCTCACATCAAAAGGTTCACCCCACTAGAATCTCCCCT
TCTCTTATGGAATCCACTTTTTGAATTAACGAAATGCACAAAAAGGCTCT
TTTTTTTGGAAAAGGGGTAAGACGTCAATGAGGACATCTTAGGCGGAGTA
CTTCCTGTGAGCCATAAAACAAATCGTGAAATGAGGTGTGGTGTAGAGAG
TTTTTTTGACTTTGCCAAAGTCCGAAAGCTATTTTCATTTATGTTAATTT
GTGGTGGCTAAATGTGTAATAAGGTGGATATTTGATCAAAGGGTGATTGG
AAAGATAAACTTAGATAAGATTGATAAGGTGGTATTGAGTAATAAATGTG
TGTGTTAGTCGAGAGAGACAGTAGCCTTTCCTAGACTTTAAACTCAAAAC
AATGGCAAGTGCAATGAATGATACTTTCAAAATGAATGATACCTTCAATG
GTAAGAATTTACAAACCTTACTCACAAAAAGTAATTTAAAGTTCCATGAT
CGTTTTTTCATGACCTTTCTATCATTTCTCAAAAATAAGTTATCCACCGA
TGGAAAATGAGTTATGCACCAATGATATCTTAATCCACCCATGTGACATG
ACTGAAGCAAATTGTAACATAGTCACAAGTGGATGGTTCCTCAGTACTCA
TTTTCACTCCATTTATTTAAAATTATTTAAAATTATCACTCCTTAGGAAA
GGCTACTGTCTCTCTCGATTAAAACATCACACACATTTATTACTCAATAC
CACCTTATCAATCTTATCTAAGTTTATCTTTCCAATCACCCTTTGATCAA
ATATTCGTAAAAAAGGAGTGATTTTAGCCTACACAGAGAGTCAAAAATCT
AAAATTTTCCCCGTCGTTGCAAACGACGCAAATATATTCCCTATCAGTAG
CCTCAGATAGTGTAACAACGACTCCGCACTACATTTTATAATTTAACATT
TGACTAGCACTGCTAGCTAATCTACCTCTAACTTTCAGAAAGACTTTCTT
CGCCCCAGTGATAATCAAGCAAAAATTGGTCACCCCACTCAACTTTTCGG
GAAATATCTTGCACCCTAGTGAATTTCAGATTTTTCACATCCCACCCCAC
TGGATGTTTCACACCCACTGGGGCACAGAGACAGGGGTGTCTTGATGTGT
TTTTCAAAAGTAATTGGGGCCAGATTCGATCTTTTTATAAGCACACTTAC
CAATTATTTAGTTTTTAAATATTTTTAAAGTATCATTAGAGATAGAAAAG
GAAATCTTATAAAAACAGATCCCTAATTCCAGCTCGACTGAAGGACTTTT
AATAATAGAAACTTATTTTCCAGCTACAGTTTAAATATATGTGCGAACAG
ATCGACAATTTCCAGATGTTCTACACAGATGGAGTGAGCAGATCTCAAAG
ACTTTGAATTTTTGGAAATTCCCTCAGAACAGATAGGAAATTCTTACACA
CCTTATTTTTTGGATATCAAACTATTTTTTCATAAGAACAGATCATATTT
TTCCAGCTGGTGCCAATCTCCAGTAGAACGGACCATATTTTTCCAGCTGG
TCCCAATTTTCAGTAGAACAGGCCACTTTTTTCCAGTAGACTTTTTTCTT
TAGTTCGCTAAGAACAGACTGCCATATCCAGCTGGAACATATGCCTGCAG
AACAGATATTTTGAAATCCCTCTTCGGTGGATGCTTTCGTATAGTCTCCA
TCCTAGATTTTGACTAAAATTTACTTTATAATATATTGTTTTGCAGAAAA
CCTTTTGGCCCATGTTGTATTAAACATTGAAGACTGAACAGGATATGAAT
AAGGTTGTATTTTAATTTACTTTATAGAAAATGACATATCAAAAGCTTGG
ACATCCCTTCAAGAACGTAGCAAACTAACAATAACATGGAATCGTGTAAA
AAGGAGAGTCATTTATGCTTCATATATTTGTCTGGCGAATTTTTTATGTG
TGATATATGATGATTGTGGTCTGGAGAAATTTTTTTCAATTCATTCTCCC
TTGGTTATAGTCTTGTTCTTGGTTATCACCATTTTGGCTCTTGATTACAA
ATGGCCTTTCATACATCTTCTAGAATTGCCTTTCTTACATCCTAATTTCT
TGAAAGGTAAGTTTTTCAAACCTTCTTTTTTCTACGGTTAATAATAAAGT
TTGTGTAGAATAGGTGTTTTCCGTCGTTCGTATTCATCATAATGGATCAC
ATTCCCCTAGGAAGATTTTATTGCCAGGTTTTGAACGGGGTTTTGAAACC
ACCCCTGAACATGAAAAGAAATCTTTACCACCCCCACCTTTCTGTAGGAC
CCCCCCCCCTTAATAGTAACAATAAGTATTGCAATAGTGAAAATTATCTA
ATCCCCAAGGAAAAAGATGTCACCCCCTCAAACCCCGGGGGGGAAGGGTA
CTTAGGCAAAATGAGTGCCGGGTATGTGTGAGTGCCGGGTATGTTCGAGC
CATAAGGTTAGCTTTTCTCATCCCTCAAAAGTCTCTCAAAGGGGTACAAA
TTCAAAAGTTAGTCTCTGAAAGGGTCCCAAAATCAAGAAAATCAAAAATT
TCCCTCTCAAAGGGTCACGATTTCCAAAAGATTTGACCAAATTTGGTGAA
AATCAAACCAAAATTTGGAAAAAATGGACCAAAATTTAGGAAAAAGTCTC
TCAAAGGGTCCCAAAATCACCAAAATTTTGTCTTTCAAAGGGTCAATTTT
TGAATTTCGGCTCGGACATAGCCGTCACCTCGCAAACCTAGTACCCCCCC
CCCGGGGCTCAAACCCTCCATTCTAATAAGAAAAGTCTTATTAAAAGTTA
GATTTCCCGGGGGGGTTACTAGAGCAAGATGGGTTACGGGGATGCTCCGC
TGGTCAGGGTACCTTTTTTAACCTCCACGAGTCCCAGGTAGGGTCGCAAA
AACACCAAAATAGAAAAATTAGTCCCTCGTAGGGTGCCTATTTTTGGAAA
ATTTGGGAAAAAGTAGAAAATTGAGAAAATTTTGGAATTTCAGTCCCATT
CAGGGTCACTTTTTTCGCAAATTTCGAGTCCCACGTAGGGTGCATTTTTC
TAACCTCAGTGGAGCACCCCCGTCGATCGACAAGGGTAGTAGCCCCCCCC
GGGTTAGATTTCCTCCTTTAAAAGCATTTTTTAAGAATATACAAACTTTG
ATTTGTCGTTTTCATATTTAGATAGAAGAGCTTTGGACCAATACTTGTTA
GTATATAAAACGGACGTTTCGAATCACAGTCTTCACTGTGTTTACATCAG
GTCAATTATCAATAGCAATGGGGGAGAATATAATTGTATCAACAGCTGGG
GAAATAAACAACGTTACCCTCGGATCCCAGTGGAGCAAGAGGGAAACGAA
CTCTGGAGAGTCAAAGTTCATTATGTTAGCAGTTCTTCTAAAGGTAAAAC
GTGAATTTTATCTTTCACCTGCTTAAAGAATTCTTGTTTTTGCTCATTTA
GATCTCTTGTTGAAGAGAACATCTATAACATTTAGATTGTTTGCCTAATT
TCCT Coding sequence (CDS) from alignment at sc0001630:6392..12245- >TCONS_00037438 ID=TCONS_00037438|Name=TCONS_00037438|organism=Clytia hemisphaerica|type=CDS|length=2655bp|location=Sequence derived from alignment at sc0001630:6392..12245- (Clytia hemisphaerica) ATAGAAGAGCTTTGGACCAATACTTGTTAGTATATAAAACGGACGTTTCG AATCACAGTCTTCACTGTGTTTACATCAGGTCAATTATCAATAGCAATGG GGGAGAATATAATTGTATCAACAGCTGGGGAAATAAACAACGTTACCCTC GGATCCCAGTGGAGCAAGAGGGAAACGAACTCTGGAGAGTCAAAGTTCAT TATGTTAGCAGTTCTTCTAAAGGTAAAACGTGAAAAATGACATATCAAAA GCTTGGACATCCCTTCAAGAACGTAGCAAACTAACAATAACATGGAATCG TGTAAAAAGGAGAGTCATTTATGCTTCATATATTTGTCTGGCGAATTTTT TATGTGTGATATATGATGATTGTGGTCTGGAGAAATTTTTTTCAATTCAT TCTCCCTTGGTTATAGTCTTGTTCTTGGTTATCACCATTTTGGCTCTTGA TTACAAATGGCCTTTCATACATCTTCTAGAATTGCCTTTCTTACATCCTA ATTTCTTGAAAGATGGTATTTCTGTTTTCCTTAAAAAGGAAAATAGATTG GTGCTGTGCAAAATTTACTGCATGGTGTTACTATTTGGTTGTTGAATGGT CTGCATGGTGGTACTATTTGGTTGTTGAATGGTCCTTTGGAAATACTAAC CAAGGCAACGAAGGAGTATGTGTCCGTCATGCCATTGCAACTGCTGTGCA CCAATTTTTTTTCAACCAAGGAATCATTACTGATCGAAACTTCTTGCTAG GAGATTCTGTTAATAAGTTGGAAGGGACTAGTGGAACAATGCCAATCGTT TATGATGGATGGAAGTCAAAATGTATGGATCAAGATTCCAATTTGTATTA CGATTTTCATTGCAATGTAGAAAAAGTCGAAGATAATAGAAGAGCTTTGG ACCAATACTTGTTAGTATATAAAACGGACGTTTCGAATCACAGTCTTCAC TGTGTTTACATCAGGTCAATTATCAATAGCAATGGGGGAGAATATAATTG TATCAACAGCTGGGGAAATAAACAACGTTACCCTCGGATCCCAGTGGAGC AAGAGGGAAACGAACTCTGGAGAGTCAAAGTTCATTATGTTAGCAGTTCT TCTAAAGGTAAAACGTGAAAAATGACATATCAAAAGCTTGGACATCCCTT CAAGAACGTAGCAAACTAACAATAACATGGAATCGTGTAAAAAGGAGAGT CATTTATGCTTCATATATTTGTCTGGCGAATTTTTTATGTGTGATATATG ATGATTGTGGTCTGGAGAAATTTTTTTCAATTCATTCTCCCTTGGTTATA GTCTTGTTCTTGGTTATCACCATTTTGGCTCTTGATTACAAATGGCCTTT CATACATCTTCTAGAATTGCCTTTCTTACATCCTAATTTCTTGAAAGATG GTATTTCTGTTTTCCTTAAAAAGGAAAATAGATTGGTGCTGTGCAAAATT TACTGCATGGTGTTACTATTTGGTTGTTGAATGGTCTGCATGGTGGTACT ATTTGGTTGTTGAATGGTCCTTTGGAAATACTAACCAAGGCAACGAAGGA GTATGTGTCCGTCATGCCATTGCAACTGCTGTGCACCAATTTTTTTTCAA CCAAGGAATCATTACTGATCGAAACTTCTTGCTAGGAGATTCTGTTAATA AGTTGGAAGGGACTAGTGGAACAATGCCAATCGTTTATGATGGATGGAAG TCAAAATGTATGGATCAAGATTCCAATTTGTATTACGATTTTCATTGCAA TGTAGAAAAAGTCGAAGATAATAGAAGAGCTTTGGACCAATACTTGTTAG TATATAAAACGGACGTTTCGAATCACAGTCTTCACTGTGTTTACATCAGG TCAATTATCAATAGCAATGGGGGAGAATATAATTGTATCAACAGCTGGGG AAATAAACAACGTTACCCTCGGATCCCAGTGGAGCAAGAGGGAAACGAAC TCTGGAGAGTCAAAGTTCATTATGTTAGCAGTTCTTCTAAAGGTAAAACG TGAAAAATGACATATCAAAAGCTTGGACATCCCTTCAAGAACGTAGCAAA CTAACAATAACATGGAATCGTGTAAAAAGGAGAGTCATTTATGCTTCATA TATTTGTCTGGCGAATTTTTTATGTGTGATATATGATGATTGTGGTCTGG AGAAATTTTTTTCAATTCATTCTCCCTTGGTTATAGTCTTGTTCTTGGTT ATCACCATTTTGGCTCTTGATTACAAATGGCCTTTCATACATCTTCTAGA ATTGCCTTTCTTACATCCTAATTTCTTGAAAGATGGTATTTCTGTTTTCC TTAAAAAGGAAAATAGATTGGTGCTGTGCAAAATTTACTGCATGGTGTTA CTATTTGGTTGTTGAATGGTCTGCATGGTGGTACTATTTGGTTGTTGAAT GGTCCTTTGGAAATACTAACCAAGGCAACGAAGGAGTATGTGTCCGTCAT GCCATTGCAACTGCTGTGCACCAATTTTTTTTCAACCAAGGAATCATTAC TGATCGAAACTTCTTGCTAGGAGATTCTGTTAATAAGTTGGAAGGGACTA GTGGAACAATGCCAATCGTTTATGATGGATGGAAGTCAAAATGTATGGAT CAAGATTCCAATTTGTATTACGATTTTCATTGCAATGTAGAAAAAGTCGA AGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00037438-exon-sc0001630-1575043694:11821..12245 | TCONS_00037438-exon-sc0001630-1575043694:11821..12245 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1575043694:7790..8068 | TCONS_00037438-exon-sc0001630-1575043694:7790..8068 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1575043694:6392..6724 | TCONS_00037438-exon-sc0001630-1575043694:6392..6724 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1510915933:11821..12245 | TCONS_00037438-exon-sc0001630-1510915933:11821..12245 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1510915933:7790..8068 | TCONS_00037438-exon-sc0001630-1510915933:7790..8068 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1510915933:6392..6724 | TCONS_00037438-exon-sc0001630-1510915933:6392..6724 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1491911889:11821..12245 | TCONS_00037438-exon-sc0001630-1491911889:11821..12245 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1491911889:7790..8068 | TCONS_00037438-exon-sc0001630-1491911889:7790..8068 | Clytia hemisphaerica | exon |
| TCONS_00037438-exon-sc0001630-1491911889:6392..6724 | TCONS_00037438-exon-sc0001630-1491911889:6392..6724 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0001630 | supercontig | sc0001630:6392..12245 - |
Blast
The following BLAST results are available for this feature:
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