TCONS_00037414 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037414
Unique NameTCONS_00037414
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length319

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037414 ID=TCONS_00037414|Name=TCONS_00037414|organism=Clytia hemisphaerica|type=transcript|length=319bp
cgtgactctggtaggaaatccttccaaagatgagcttcactttttgataa
aagctgcaaatctagcccttcgggctttacagatatctgtgatgCTCACA
ATCAACTAAACTTAAAGCCATGTACGGAATCATGCATTTTGAAACATCTC
TCAAAAAGAAACCGATGACATCATTTGAAATTGATATTGAATGGAACGCT
CTGGAATTTCATCCGACTGAAAATACGAAGAAACATGGAGGAGTTTATAT
AGCGTACACTTTCGGTATGAAAAACGGACCCGGAGGATATTTTGGAATAC
AAATTCATGCTGACGGAGG
Run BLAST on NCBI

transcript from alignment at sc0001625:306..624

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037414 ID=TCONS_00037414|Name=TCONS_00037414|organism=Clytia hemisphaerica|type=transcript|length=319bp|location=Sequence derived from alignment at sc0001625:306..624 (Clytia hemisphaerica)
CCTCCGTCAGCATGAATTTGTATTCCAAAATATCCTCCGGGTCCGTTTTT
CATACCGAAAGTGTACGCTATATAAACTCCTCCATGTTTCTTCGTATTTT
CAGTCGGATGAAATTCCAGAGCGTTCCATTCAATATCAATTTCAAATGAT
GTCATCGGTTTCTTTTTGAGAGATGTTTCAAAATGCATGATTCCGTACAT
GGCTTTAAGTTTAGTTGATTGTGAGcatcacagatatctgtaaagcccga
agggctagatttgcagcttttatcaaaaagtgaagctcatctttggaagg
atttcctaccagagtcacg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022189XLOC_022189Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037414-exon-sc0001625-1491911889:306..624TCONS_00037414-exon-sc0001625-1491911889:306..624Clytia hemisphaericaexon
TCONS_00037414-exon-sc0001625-1510915933:306..624TCONS_00037414-exon-sc0001625-1510915933:306..624Clytia hemisphaericaexon
TCONS_00037414-exon-sc0001625-1575043694:306..624TCONS_00037414-exon-sc0001625-1575043694:306..624Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001625supercontigsc0001625:306..624 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07017	0	0	0.805482	0.869765	2.42494	4.23237	4.74627	15.9763	15.7959	7.78079	15.353	18.575	20.0478	0.203324	0	7.6126	0.250108	0	0	15.4593	14.5455	0.293077	0	13.9713	15.1394	3.21245	5.14772	1.09768	2.08536
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037414 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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