TCONS_00037409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037409
Unique NameTCONS_00037409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2052

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037409 ID=TCONS_00037409|Name=TCONS_00037409|organism=Clytia hemisphaerica|type=transcript|length=2052bp
CGATTTCGTAGAGGTGATCCCTAATCcgaaatcgaacgttttactccata
atggtggaaattacgtaacttaacaaatGATGAATTTGTTCTCCAATTGT
TAATCATGGGAGTGCTTTCATTTTGGAGAATTAGTCCTTTATCGTTCAAA
ACCCAATTTCTTTTAGATCGAGAGGAGACTTTGACGGAAATGATACTTCA
CTGGAATCGAAAGAAAGTCGAAAACCTCGCTCGTTACTTAGTCAAAAAGT
ATAATACAgttaaaCAGGACCAACTCAAATATCAAACCGAAATTGAGAAA
GCATTGAACAAAGTCGAAATGATTCCAGAGTCAGTTGATTTTGAAATGAT
AAAACGAGAAATAAGAGACATTGCTGCCAAAATTGCTGTCCCCACGAACT
TTCAACTTTCGACATACGAGAAAAGTGTTCTGCTTTATCAGGACATGAAG
ACAGAGCTTTACGacaatgatgaatttcttgaTTTGAGAAAGAGTTGTCC
TGTGCTACCTGATCTCTCACCATTGAATATTCCGTTGTTGATGAAGTCAA
AAGCTGAAAAGATCAAGCTACTACGAGAATTAATCAAGTGCGACACAGAT
CATGCCATTAGCAATTTGTTGTCATTTCTAACTGTGGGATATCGAAGATT
GATGGAATCCACAtactttgaaaaagtgcacCACCTCTCTAGAGTTGAGA
GGCTTGCAGtcaCGTCGAAACAAAGAACTGTGCTACGTCAAAAGGCTGGT
AAATGTAAcacaatcctaaaaacatttGCTGTTAGCTATAACACAATCGC
AATCGACCCTGTTATGGTCGACGATATCCAGCGTGGAGTGTTTGAATGGA
AATCGCGAATCTTTAAGGGATCCTTCCCAGTTGAATTTACAGACATAGCT
AAAAGATCTGTATTGGAATCTCACGCCAAAAAGAAGAGATGTGACGAAGA
ATTGACGATACTCGAACACGACATGACAAAATATCTTCGTTTTTACGCCG
ACACCTGTATGGAATTGGAACAAGATATGGTAGACAAAGCTAACGAGGTT
TCAAACACTGGAATGCTCATACTGCTCCGTGAAGGGTATCTTTTTGCTCA
AAAGAAGCTTCACCTTGGATTGGATTTGTTTCAACCTTTTGTTCCGTCCA
TTCCATCATTACACCAAGACGAGCTCGTTGAGATTGACGATGAGTGTACA
AGCGATATTCTCATTGAAAATGTAGATGAAAGAGTGGAAGAAGACGACTT
TTTTTTAGATGCTGAACTTCTTATGTTCACTGGTTCAGAGATCATGAAAA
ACTGtctttctttttcgttttcgtCTAATCTGGCCCGTTTTCCTCGCGAT
ATTTCACAGTCTACTCTAAATGGAAGAAATGGAAGTAGTGCCTGCACTAC
AATCGCCCTACTTGTTGGTCACTTCCTTCCAAGCCTTCTTTCAGGGGATG
CATTACGAAACAAGGAAGTTATCGAGGCGTTTGTTGGTTGTATTGATTTT
GGTAACTTTTACCACGACAATCAATACAGTACGACAGTAATTGACAGTAT
CGATCTCCTGCCAATGAGTTTCAATGTCAGATCAGAACTTAATTGTCTGA
AAACTAGGCTTTCTGAAGCTTTGACGTCAATTGATGGTGACCAATGGTTC
ACGGTTATAACTGGAAACAACGAAAAATCGTTCTGTTGTATTCctcagaa
aaactttttttatttttttgattcccACGTACATGATAAATATGGTGCGT
TGATAATACGACACGAGAAGGAAGAAAGAGTAGAGAATTTAGAATTGTTT
TCAAATGTGAGTGAATTCTCGATATGTGTCATCTCCATCTAGTTTGAAGA
CTGGACTGAATCTTATATACTATTTGGGTTTTGGAAAAATGTCACGCTAG
CCAAGTAATATATCATATGAaagtttctaattttttttttcaatataaaa
ttCATCAACGAGGAATTattatatcaggaattattcaatggctatTTTTG
CCTACGGGTATATAATAATATCATTTATTACTACGGGATAGTGTTGTTTT
CT
Run BLAST on NCBI

protein sequence of TCONS_00037409-protein

>TCONS_00037409-protein ID=TCONS_00037409-protein|Name=TCONS_00037409-protein|organism=Clytia hemisphaerica|type=polypeptide|length=578bp
MGVLSFWRISPLSFKTQFLLDREETLTEMILHWNRKKVENLARYLVKKYN
TVKQDQLKYQTEIEKALNKVEMIPESVDFEMIKREIRDIAAKIAVPTNFQ
LSTYEKSVLLYQDMKTELYDNDEFLDLRKSCPVLPDLSPLNIPLLMKSKA
EKIKLLRELIKCDTDHAISNLLSFLTVGYRRLMESTYFEKVHHLSRVERL
AVTSKQRTVLRQKAGKCNTILKTFAVSYNTIAIDPVMVDDIQRGVFEWKS
RIFKGSFPVEFTDIAKRSVLESHAKKKRCDEELTILEHDMTKYLRFYADT
CMELEQDMVDKANEVSNTGMLILLREGYLFAQKKLHLGLDLFQPFVPSIP
SLHQDELVEIDDECTSDILIENVDERVEEDDFFLDAELLMFTGSEIMKNC
LSFSFSSNLARFPRDISQSTLNGRNGSSACTTIALLVGHFLPSLLSGDAL
RNKEVIEAFVGCIDFGNFYHDNQYSTTVIDSIDLLPMSFNVRSELNCLKT
RLSEALTSIDGDQWFTVITGNNEKSFCCIPQKNFFYFFDSHVHDKYGALI
IRHEKEERVENLELFSNVSEFSICVISI
Run BLAST on NCBI

transcript from alignment at sc0001625:80609..83835+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037409 ID=TCONS_00037409|Name=TCONS_00037409|organism=Clytia hemisphaerica|type=transcript|length=3227bp|location=Sequence derived from alignment at sc0001625:80609..83835+ (Clytia hemisphaerica)
CGATTTCGTAGAGGTGATCCCTAATCcgaaatcgaacgttttactccata
atggtggaaattacgtaacttaacaaatGATGAATTTGTTCTCCAATTGT
TAATCATGGGAGTGCTTTCATTTTGGAGAATTAGTCCTTTATCGTTCAAA
ACCCAATTTCTTTTAGATCGAGAGGAGACTTTGACGGAAATGATACTTCA
CTGGAATCGAAAGAAAGTCGAAAACCTCGCTCGTTACTTAGTCAAAAAGT
ATAATACAGTGAGTGAACTCTTTTAATATCTTCTTCATCCAAAAATTCTT
AACTTCacttagaaaatgaaaagtttgtttgtGTGTCTTTCCACCAAGTT
ACGGATCCCTGCCCTAGAGCTGATTAAAATTTGAGGGACTTCAGACGAGT
TTTTGCGCCAAAACAGTCAAGTTTGATTGGAAAATCCGTGAaggagtatt
tttttttttttttttttttttttttttttttttttttttttttttttttt
ttaggttaaaCAGGACCAACTCAAATATCAAACCGAAATTGAGAAAGCAT
TGAACAAAGTCGAAATGATTCCAGAGTCAGTTGATTTTGAAATGATAAAA
CGAGAAATAAGAGACATTGCTGCCAAAAGTAAATTATTAACTTTCTTAAA
CTTTTGCTtccatttaaaagatttttaaaatgggCTCTTGCTCAATCTAG
AATTTTTCCTAAATATTTTCTCCCAATATCGAAATACCTCCTGCGCCAAT
GCATTGACATTCATTATTATTGGCTATAAGTAAACTTAACAATAATTTAC
AACGTTTGGTCTTCATTTTGTTGTGAAGTtatgtattattttttattcac
GTTACAAAAAACTTAATTTCAGTTGCTGTCCCCACGAACTTTCAACTTTC
GACATACGAGAAAAGTGTTCTGCTTTATCAGGACATGAAGACAGAGCTTT
ACGacaatgatgaatttcttgaTTTGAGAAAGAGTTGTCCTGTGCTACCT
GATCTCTCACCATTGAATATTCCGTTGTTGATGAAGTCAAAAGCTGAAAA
GATCAAGCTACTACGAGAATTAATCAAGTGCGACACAGATCATGCCATTA
GCAATTTGTTGTCATTTCTAACTGTGGGATATCGAAGATTGATGGAATCC
ACAtactttgaaaaagtgcacCACCTCTCTAGAGTTGAGAGGCTTGCAGG
TTAGTGTGTTTCATTAAAAAAGAATAGTGATAAGTAGTAGTTGTTAAATA
CAAACTTctttaaataaataattttggcaaaaacctATGAACAAATTAAG
ACATATGAGACATGAAATCGATCACTttcatgaaaatgttttttatgacC
CACGCTCTtcgcttatttttcttttcagtcaCGTCGAAACAAAGAACTGT
GCTACGTCAAAAGGCTGGTAAATGTAAcacaatcctaaaaacatttGCTG
TTAGCTATAACACAATCGCAATCGACCCTGTTATGGTCGACGATATCCAG
CGTGGAGTGTTTGAATGGAAATCGCGAATCTTTAAGGGATCCTTCCCAGT
TGAATTTACAGGTATATACATTAAATCTCCGGTTATTCGACTTTCCCAGC
AAAAATGTCCGAAAAAAAGCAGAATAAAAGGGAGTTCGAATTACTGAAAT
CTCTTTCTTTCAAATTAGTCTTTTTGTTTGGGTTTTTACGAAGAAGCTTA
GACAAAAATTGCAGAAACTACACGAAAGTGTAATTTGGACATCTATTTTC
GGGGAAAATAtgcttgaaaaatgaaagaaattatgcGTGAAAAGTATTTA
ATAAAAATCGTGCTCTCTTTCAACGATGTCCGGGAAAACTCCGAACACTT
CTAATTGGTGATTCATTGTTTAGAACAGATATTTTTCATTACTATCATTT
ATTTCTTCTTAGACATAGCTAAAAGATCTGTATTGGAATCTCACGCCAAA
AAGAAGAGATGTGACGAAGAATTGACGATACTCGAACACGACATGACAAA
ATATCTTCGTTTTTACGCCGACACCTGTATGGAATTGGAACAAGATATGG
TAGACAAAGCTAACGAGGCAAGTCTTCCTTGGTCTAGTGCTAATATGTTA
ATTAGTACTGAATTCTTATCGAGATCGAGAttctattgaaaatgaaaaaa
taaacatgaCTTTCGatgtattttcacttttgaaGAAACATCCTATCTAA
CTTAAGAAATTTTCGTTTTTAGGTTTCAAACACTGGAATGCTCATACTGC
TCCGTGAAGGGTATCTTTTTGCTCAAAAGAAGCTTCACCTTGGATTGGAT
TTGTTTCAACCTTTTGTTCCGTCCATTCCATCATTACACCAAGACGAGCT
CGTTGAGATTGACGATGAGTGTACAAGCGATATTCTCATTGAAAATGTAG
ATGAAAGAGTGGAAGAAGACGACTTTTTTTTAGATGCTGAACTTCTTATG
TTCACTGGTTCAGAGATCATGAAAAACTGtctttctttttcgttttcgtC
TAATCTGGCCCGTTTTCCTCGCGATATTTCACAGTCTACTCTAAATGGAA
GAAATGGAAGTAGTGCCTGCACTACAATCGCCCTACTTGTTGGTCACTTC
CTTCCAAGCCTTCTTTCAGGGGATGCATTACGAAACAAGGAAGTTATCGA
GGCGTTTGTTGGTTGTATTGATTTTGGTAACTTTTACCACGACAATCAAT
ACAGTACGACAGTAATTGACAGTATCGATCTCCTGCCAATGAGTTTCAAT
GTCAGATCAGAACTTAATTGTCTGAAAACTAGGCTTTCTGAAGCTTTGAC
GTCAATTGATGGTGACCAATGGTTCACGGTTATAACTGGAAACAACGAAA
AATCGTTCTGTTGTATTCctcagaaaaactttttttatttttttgattcc
cACGTACATGATAAATATGGTGCGTTGATAATACGACACGAGAAGGAAGA
AAGAGTAGAGAATTTAGAATTGTTTTCAAATGTGAGTGAATTCTCGATAT
GTGTCATCTCCATCTAGTTTGAAGACTGGACTGAATCTTATATACTATTT
GGGTTTTGGAAAAATGTCACGCTAGCCAAGTAATATATCATATGAaagtt
tctaattttttttttcaatataaaattCATCAACGAGGAATTattatatc
aggaattattcaatggctatTTTTGCCTACGGGTATATAATAATATCATT
TATTACTACGGGATAGTGTTGTTTTCT

Coding sequence (CDS) from alignment at sc0001625:80609..83835+

>TCONS_00037409 ID=TCONS_00037409|Name=TCONS_00037409|organism=Clytia hemisphaerica|type=CDS|length=10422bp|location=Sequence derived from alignment at sc0001625:80609..83835+ (Clytia hemisphaerica)
ATGGGAGTGCTTTCATTTTGGAGAATTAGTCCTTTATCGTTCAAAACCCA
ATTTCTTTTAGATCGAGAGGAGACTTTGACGGAAATGATACTTCACTGGA
ATCGAAAGAAAGTCGAAAACCTCGCTCGTTACTTAGTCAAAAAGTATAAT
ACAgttaaaCAGGACCAACTCAAATATCAAACCGAAATTGAGAAAGCATT
GAACAAAGTCGAAATGATTCCAGAGTCAGTTGATTTTGAAATGATAAAAC
GAGAAATAAGAGACATTGCTGCCAAAATTGCTGTCCCCACGAACTTTCAA
CTTTCGACATACGAGAAAAGTGTTCTGCTTTATCAGGACATGAAGACAGA
GCTTTACGacaatgatgaatttcttgaTTTGAGAAAGAGTTGTCCTGTGC
TACCTGATCTCTCACCATTGAATATTCCGTTGTTGATGAAGTCAAAAGCT
GAAAAGATCAAGCTACTACGAGAATTAATCAAGTGCGACACAGATCATGC
CATTAGCAATTTGTTGTCATTTCTAACTGTGGGATATCGAAGATTGATGG
AATCCACAtactttgaaaaagtgcacCACCTCTCTAGAGTTGAGAGGCTT
GCAGtcaCGTCGAAACAAAGAACTGTGCTACGTCAAAAGGCTGGTAAATG
TAAcacaatcctaaaaacatttGCTGTTAGCTATAACACAATCGCAATCG
ACCCTGTTATGGTCGACGATATCCAGCGTGGAGTGTTTGAATGGAAATCG
CGAATCTTTAAGGGATCCTTCCCAGTTGAATTTACAGACATAGCTAAAAG
ATCTGTATTGGAATCTCACGCCAAAAAGAAGAGATGTGACGAAGAATTGA
CGATACTCGAACACGACATGACAAAATATCTTCGTTTTTACGCCGACACC
TGTATGGAATTGGAACAAGATATGGTAGACAAAGCTAACGAGGTTTCAAA
CACTGGAATGCTCATACTGCTCCGTGAAGGGTATCTTTTTGCTCAAAAGA
AGCTTCACCTTGGATTGGATTTGTTTCAACCTTTTGTTCCGTCCATTCCA
TCATTACACCAAGACGAGCTCGTTGAGATTGACGATGAGTGTACAAGCGA
TATTCTCATTGAAAATGTAGATGAAAGAGTGGAAGAAGACGACTTTTTTT
TAGATGCTGAACTTCTTATGTTCACTGGTTCAGAGATCATGAAAAACTGt
ctttctttttcgttttcgtCTAATCTGGCCCGTTTTCCTCGCGATATTTC
ACAGTCTACTCTAAATGGAAGAAATGGAAGTAGTGCCTGCACTACAATCG
CCCTACTTGTTGGTCACTTCCTTCCAAGCCTTCTTTCAGGGGATGCATTA
CGAAACAAGGAAGTTATCGAGGCGTTTGTTGGTTGTATTGATTTTGGTAA
CTTTTACCACGACAATCAATACAGTACGACAGTAATTGACAGTATCGATC
TCCTGCCAATGAGTTTCAATGTCAGATCAGAACTTAATTGTCTGAAAACT
AGGCTTTCTGAAGCTTTGACGTCAATTGATGGTGACCAATGGTTCACGGT
TATAACTGGAAACAACGAAAAATCGTTCTGTTGTATTCctcagaaaaact
ttttttatttttttgattcccACGTACATGATAAATATGGTGCGTTGATA
ATACGACACGAGAAGGAAGAAAGAGTAGAGAATTTAGAATTGTTTTCAAA
TGTGAGTGAATTCTCGATATGTGTCATCTCCATCTAGATGGGAGTGCTTT
CATTTTGGAGAATTAGTCCTTTATCGTTCAAAACCCAATTTCTTTTAGAT
CGAGAGGAGACTTTGACGGAAATGATACTTCACTGGAATCGAAAGAAAGT
CGAAAACCTCGCTCGTTACTTAGTCAAAAAGTATAATACAgttaaaCAGG
ACCAACTCAAATATCAAACCGAAATTGAGAAAGCATTGAACAAAGTCGAA
ATGATTCCAGAGTCAGTTGATTTTGAAATGATAAAACGAGAAATAAGAGA
CATTGCTGCCAAAATTGCTGTCCCCACGAACTTTCAACTTTCGACATACG
AGAAAAGTGTTCTGCTTTATCAGGACATGAAGACAGAGCTTTACGacaat
gatgaatttcttgaTTTGAGAAAGAGTTGTCCTGTGCTACCTGATCTCTC
ACCATTGAATATTCCGTTGTTGATGAAGTCAAAAGCTGAAAAGATCAAGC
TACTACGAGAATTAATCAAGTGCGACACAGATCATGCCATTAGCAATTTG
TTGTCATTTCTAACTGTGGGATATCGAAGATTGATGGAATCCACAtactt
tgaaaaagtgcacCACCTCTCTAGAGTTGAGAGGCTTGCAGtcaCGTCGA
AACAAAGAACTGTGCTACGTCAAAAGGCTGGTAAATGTAAcacaatccta
aaaacatttGCTGTTAGCTATAACACAATCGCAATCGACCCTGTTATGGT
CGACGATATCCAGCGTGGAGTGTTTGAATGGAAATCGCGAATCTTTAAGG
GATCCTTCCCAGTTGAATTTACAGACATAGCTAAAAGATCTGTATTGGAA
TCTCACGCCAAAAAGAAGAGATGTGACGAAGAATTGACGATACTCGAACA
CGACATGACAAAATATCTTCGTTTTTACGCCGACACCTGTATGGAATTGG
AACAAGATATGGTAGACAAAGCTAACGAGGTTTCAAACACTGGAATGCTC
ATACTGCTCCGTGAAGGGTATCTTTTTGCTCAAAAGAAGCTTCACCTTGG
ATTGGATTTGTTTCAACCTTTTGTTCCGTCCATTCCATCATTACACCAAG
ACGAGCTCGTTGAGATTGACGATGAGTGTACAAGCGATATTCTCATTGAA
AATGTAGATGAAAGAGTGGAAGAAGACGACTTTTTTTTAGATGCTGAACT
TCTTATGTTCACTGGTTCAGAGATCATGAAAAACTGtctttctttttcgt
tttcgtCTAATCTGGCCCGTTTTCCTCGCGATATTTCACAGTCTACTCTA
AATGGAAGAAATGGAAGTAGTGCCTGCACTACAATCGCCCTACTTGTTGG
TCACTTCCTTCCAAGCCTTCTTTCAGGGGATGCATTACGAAACAAGGAAG
TTATCGAGGCGTTTGTTGGTTGTATTGATTTTGGTAACTTTTACCACGAC
AATCAATACAGTACGACAGTAATTGACAGTATCGATCTCCTGCCAATGAG
TTTCAATGTCAGATCAGAACTTAATTGTCTGAAAACTAGGCTTTCTGAAG
CTTTGACGTCAATTGATGGTGACCAATGGTTCACGGTTATAACTGGAAAC
AACGAAAAATCGTTCTGTTGTATTCctcagaaaaactttttttatttttt
tgattcccACGTACATGATAAATATGGTGCGTTGATAATACGACACGAGA
AGGAAGAAAGAGTAGAGAATTTAGAATTGTTTTCAAATGTGAGTGAATTC
TCGATATGTGTCATCTCCATCTAGATGGGAGTGCTTTCATTTTGGAGAAT
TAGTCCTTTATCGTTCAAAACCCAATTTCTTTTAGATCGAGAGGAGACTT
TGACGGAAATGATACTTCACTGGAATCGAAAGAAAGTCGAAAACCTCGCT
CGTTACTTAGTCAAAAAGTATAATACAgttaaaCAGGACCAACTCAAATA
TCAAACCGAAATTGAGAAAGCATTGAACAAAGTCGAAATGATTCCAGAGT
CAGTTGATTTTGAAATGATAAAACGAGAAATAAGAGACATTGCTGCCAAA
ATTGCTGTCCCCACGAACTTTCAACTTTCGACATACGAGAAAAGTGTTCT
GCTTTATCAGGACATGAAGACAGAGCTTTACGacaatgatgaatttcttg
aTTTGAGAAAGAGTTGTCCTGTGCTACCTGATCTCTCACCATTGAATATT
CCGTTGTTGATGAAGTCAAAAGCTGAAAAGATCAAGCTACTACGAGAATT
AATCAAGTGCGACACAGATCATGCCATTAGCAATTTGTTGTCATTTCTAA
CTGTGGGATATCGAAGATTGATGGAATCCACAtactttgaaaaagtgcac
CACCTCTCTAGAGTTGAGAGGCTTGCAGtcaCGTCGAAACAAAGAACTGT
GCTACGTCAAAAGGCTGGTAAATGTAAcacaatcctaaaaacatttGCTG
TTAGCTATAACACAATCGCAATCGACCCTGTTATGGTCGACGATATCCAG
CGTGGAGTGTTTGAATGGAAATCGCGAATCTTTAAGGGATCCTTCCCAGT
TGAATTTACAGACATAGCTAAAAGATCTGTATTGGAATCTCACGCCAAAA
AGAAGAGATGTGACGAAGAATTGACGATACTCGAACACGACATGACAAAA
TATCTTCGTTTTTACGCCGACACCTGTATGGAATTGGAACAAGATATGGT
AGACAAAGCTAACGAGGTTTCAAACACTGGAATGCTCATACTGCTCCGTG
AAGGGTATCTTTTTGCTCAAAAGAAGCTTCACCTTGGATTGGATTTGTTT
CAACCTTTTGTTCCGTCCATTCCATCATTACACCAAGACGAGCTCGTTGA
GATTGACGATGAGTGTACAAGCGATATTCTCATTGAAAATGTAGATGAAA
GAGTGGAAGAAGACGACTTTTTTTTAGATGCTGAACTTCTTATGTTCACT
GGTTCAGAGATCATGAAAAACTGtctttctttttcgttttcgtCTAATCT
GGCCCGTTTTCCTCGCGATATTTCACAGTCTACTCTAAATGGAAGAAATG
GAAGTAGTGCCTGCACTACAATCGCCCTACTTGTTGGTCACTTCCTTCCA
AGCCTTCTTTCAGGGGATGCATTACGAAACAAGGAAGTTATCGAGGCGTT
TGTTGGTTGTATTGATTTTGGTAACTTTTACCACGACAATCAATACAGTA
CGACAGTAATTGACAGTATCGATCTCCTGCCAATGAGTTTCAATGTCAGA
TCAGAACTTAATTGTCTGAAAACTAGGCTTTCTGAAGCTTTGACGTCAAT
TGATGGTGACCAATGGTTCACGGTTATAACTGGAAACAACGAAAAATCGT
TCTGTTGTATTCctcagaaaaactttttttatttttttgattcccACGTA
CATGATAAATATGGTGCGTTGATAATACGACACGAGAAGGAAGAAAGAGT
AGAGAATTTAGAATTGTTTTCAAATGTGAGTGAATTCTCGATATGTGTCA
TCTCCATCTAGATGGGAGTGCTTTCATTTTGGAGAATTAGTCCTTTATCG
TTCAAAACCCAATTTCTTTTAGATCGAGAGGAGACTTTGACGGAAATGAT
ACTTCACTGGAATCGAAAGAAAGTCGAAAACCTCGCTCGTTACTTAGTCA
AAAAGTATAATACAgttaaaCAGGACCAACTCAAATATCAAACCGAAATT
GAGAAAGCATTGAACAAAGTCGAAATGATTCCAGAGTCAGTTGATTTTGA
AATGATAAAACGAGAAATAAGAGACATTGCTGCCAAAATTGCTGTCCCCA
CGAACTTTCAACTTTCGACATACGAGAAAAGTGTTCTGCTTTATCAGGAC
ATGAAGACAGAGCTTTACGacaatgatgaatttcttgaTTTGAGAAAGAG
TTGTCCTGTGCTACCTGATCTCTCACCATTGAATATTCCGTTGTTGATGA
AGTCAAAAGCTGAAAAGATCAAGCTACTACGAGAATTAATCAAGTGCGAC
ACAGATCATGCCATTAGCAATTTGTTGTCATTTCTAACTGTGGGATATCG
AAGATTGATGGAATCCACAtactttgaaaaagtgcacCACCTCTCTAGAG
TTGAGAGGCTTGCAGtcaCGTCGAAACAAAGAACTGTGCTACGTCAAAAG
GCTGGTAAATGTAAcacaatcctaaaaacatttGCTGTTAGCTATAACAC
AATCGCAATCGACCCTGTTATGGTCGACGATATCCAGCGTGGAGTGTTTG
AATGGAAATCGCGAATCTTTAAGGGATCCTTCCCAGTTGAATTTACAGAC
ATAGCTAAAAGATCTGTATTGGAATCTCACGCCAAAAAGAAGAGATGTGA
CGAAGAATTGACGATACTCGAACACGACATGACAAAATATCTTCGTTTTT
ACGCCGACACCTGTATGGAATTGGAACAAGATATGGTAGACAAAGCTAAC
GAGGTTTCAAACACTGGAATGCTCATACTGCTCCGTGAAGGGTATCTTTT
TGCTCAAAAGAAGCTTCACCTTGGATTGGATTTGTTTCAACCTTTTGTTC
CGTCCATTCCATCATTACACCAAGACGAGCTCGTTGAGATTGACGATGAG
TGTACAAGCGATATTCTCATTGAAAATGTAGATGAAAGAGTGGAAGAAGA
CGACTTTTTTTTAGATGCTGAACTTCTTATGTTCACTGGTTCAGAGATCA
TGAAAAACTGtctttctttttcgttttcgtCTAATCTGGCCCGTTTTCCT
CGCGATATTTCACAGTCTACTCTAAATGGAAGAAATGGAAGTAGTGCCTG
CACTACAATCGCCCTACTTGTTGGTCACTTCCTTCCAAGCCTTCTTTCAG
GGGATGCATTACGAAACAAGGAAGTTATCGAGGCGTTTGTTGGTTGTATT
GATTTTGGTAACTTTTACCACGACAATCAATACAGTACGACAGTAATTGA
CAGTATCGATCTCCTGCCAATGAGTTTCAATGTCAGATCAGAACTTAATT
GTCTGAAAACTAGGCTTTCTGAAGCTTTGACGTCAATTGATGGTGACCAA
TGGTTCACGGTTATAACTGGAAACAACGAAAAATCGTTCTGTTGTATTCc
tcagaaaaactttttttatttttttgattcccACGTACATGATAAATATG
GTGCGTTGATAATACGACACGAGAAGGAAGAAAGAGTAGAGAATTTAGAA
TTGTTTTCAAATGTGAGTGAATTCTCGATATGTGTCATCTCCATCTAGAT
GGGAGTGCTTTCATTTTGGAGAATTAGTCCTTTATCGTTCAAAACCCAAT
TTCTTTTAGATCGAGAGGAGACTTTGACGGAAATGATACTTCACTGGAAT
CGAAAGAAAGTCGAAAACCTCGCTCGTTACTTAGTCAAAAAGTATAATAC
AgttaaaCAGGACCAACTCAAATATCAAACCGAAATTGAGAAAGCATTGA
ACAAAGTCGAAATGATTCCAGAGTCAGTTGATTTTGAAATGATAAAACGA
GAAATAAGAGACATTGCTGCCAAAATTGCTGTCCCCACGAACTTTCAACT
TTCGACATACGAGAAAAGTGTTCTGCTTTATCAGGACATGAAGACAGAGC
TTTACGacaatgatgaatttcttgaTTTGAGAAAGAGTTGTCCTGTGCTA
CCTGATCTCTCACCATTGAATATTCCGTTGTTGATGAAGTCAAAAGCTGA
AAAGATCAAGCTACTACGAGAATTAATCAAGTGCGACACAGATCATGCCA
TTAGCAATTTGTTGTCATTTCTAACTGTGGGATATCGAAGATTGATGGAA
TCCACAtactttgaaaaagtgcacCACCTCTCTAGAGTTGAGAGGCTTGC
AGtcaCGTCGAAACAAAGAACTGTGCTACGTCAAAAGGCTGGTAAATGTA
AcacaatcctaaaaacatttGCTGTTAGCTATAACACAATCGCAATCGAC
CCTGTTATGGTCGACGATATCCAGCGTGGAGTGTTTGAATGGAAATCGCG
AATCTTTAAGGGATCCTTCCCAGTTGAATTTACAGACATAGCTAAAAGAT
CTGTATTGGAATCTCACGCCAAAAAGAAGAGATGTGACGAAGAATTGACG
ATACTCGAACACGACATGACAAAATATCTTCGTTTTTACGCCGACACCTG
TATGGAATTGGAACAAGATATGGTAGACAAAGCTAACGAGGTTTCAAACA
CTGGAATGCTCATACTGCTCCGTGAAGGGTATCTTTTTGCTCAAAAGAAG
CTTCACCTTGGATTGGATTTGTTTCAACCTTTTGTTCCGTCCATTCCATC
ATTACACCAAGACGAGCTCGTTGAGATTGACGATGAGTGTACAAGCGATA
TTCTCATTGAAAATGTAGATGAAAGAGTGGAAGAAGACGACTTTTTTTTA
GATGCTGAACTTCTTATGTTCACTGGTTCAGAGATCATGAAAAACTGtct
ttctttttcgttttcgtCTAATCTGGCCCGTTTTCCTCGCGATATTTCAC
AGTCTACTCTAAATGGAAGAAATGGAAGTAGTGCCTGCACTACAATCGCC
CTACTTGTTGGTCACTTCCTTCCAAGCCTTCTTTCAGGGGATGCATTACG
AAACAAGGAAGTTATCGAGGCGTTTGTTGGTTGTATTGATTTTGGTAACT
TTTACCACGACAATCAATACAGTACGACAGTAATTGACAGTATCGATCTC
CTGCCAATGAGTTTCAATGTCAGATCAGAACTTAATTGTCTGAAAACTAG
GCTTTCTGAAGCTTTGACGTCAATTGATGGTGACCAATGGTTCACGGTTA
TAACTGGAAACAACGAAAAATCGTTCTGTTGTATTCctcagaaaaacttt
ttttatttttttgattcccACGTACATGATAAATATGGTGCGTTGATAAT
ACGACACGAGAAGGAAGAAAGAGTAGAGAATTTAGAATTGTTTTCAAATG
TGAGTGAATTCTCGATATGTGTCATCTCCATCTAGATGGGAGTGCTTTCA
TTTTGGAGAATTAGTCCTTTATCGTTCAAAACCCAATTTCTTTTAGATCG
AGAGGAGACTTTGACGGAAATGATACTTCACTGGAATCGAAAGAAAGTCG
AAAACCTCGCTCGTTACTTAGTCAAAAAGTATAATACAgttaaaCAGGAC
CAACTCAAATATCAAACCGAAATTGAGAAAGCATTGAACAAAGTCGAAAT
GATTCCAGAGTCAGTTGATTTTGAAATGATAAAACGAGAAATAAGAGACA
TTGCTGCCAAAATTGCTGTCCCCACGAACTTTCAACTTTCGACATACGAG
AAAAGTGTTCTGCTTTATCAGGACATGAAGACAGAGCTTTACGacaatga
tgaatttcttgaTTTGAGAAAGAGTTGTCCTGTGCTACCTGATCTCTCAC
CATTGAATATTCCGTTGTTGATGAAGTCAAAAGCTGAAAAGATCAAGCTA
CTACGAGAATTAATCAAGTGCGACACAGATCATGCCATTAGCAATTTGTT
GTCATTTCTAACTGTGGGATATCGAAGATTGATGGAATCCACAtactttg
aaaaagtgcacCACCTCTCTAGAGTTGAGAGGCTTGCAGtcaCGTCGAAA
CAAAGAACTGTGCTACGTCAAAAGGCTGGTAAATGTAAcacaatcctaaa
aacatttGCTGTTAGCTATAACACAATCGCAATCGACCCTGTTATGGTCG
ACGATATCCAGCGTGGAGTGTTTGAATGGAAATCGCGAATCTTTAAGGGA
TCCTTCCCAGTTGAATTTACAGACATAGCTAAAAGATCTGTATTGGAATC
TCACGCCAAAAAGAAGAGATGTGACGAAGAATTGACGATACTCGAACACG
ACATGACAAAATATCTTCGTTTTTACGCCGACACCTGTATGGAATTGGAA
CAAGATATGGTAGACAAAGCTAACGAGGTTTCAAACACTGGAATGCTCAT
ACTGCTCCGTGAAGGGTATCTTTTTGCTCAAAAGAAGCTTCACCTTGGAT
TGGATTTGTTTCAACCTTTTGTTCCGTCCATTCCATCATTACACCAAGAC
GAGCTCGTTGAGATTGACGATGAGTGTACAAGCGATATTCTCATTGAAAA
TGTAGATGAAAGAGTGGAAGAAGACGACTTTTTTTTAGATGCTGAACTTC
TTATGTTCACTGGTTCAGAGATCATGAAAAACTGtctttctttttcgttt
tcgtCTAATCTGGCCCGTTTTCCTCGCGATATTTCACAGTCTACTCTAAA
TGGAAGAAATGGAAGTAGTGCCTGCACTACAATCGCCCTACTTGTTGGTC
ACTTCCTTCCAAGCCTTCTTTCAGGGGATGCATTACGAAACAAGGAAGTT
ATCGAGGCGTTTGTTGGTTGTATTGATTTTGGTAACTTTTACCACGACAA
TCAATACAGTACGACAGTAATTGACAGTATCGATCTCCTGCCAATGAGTT
TCAATGTCAGATCAGAACTTAATTGTCTGAAAACTAGGCTTTCTGAAGCT
TTGACGTCAATTGATGGTGACCAATGGTTCACGGTTATAACTGGAAACAA
CGAAAAATCGTTCTGTTGTATTCctcagaaaaactttttttatttttttg
attcccACGTACATGATAAATATGGTGCGTTGATAATACGACACGAGAAG
GAAGAAAGAGTAGAGAATTTAGAATTGTTTTCAAATGTGAGTGAATTCTC
GATATGTGTCATCTCCATCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022184XLOC_022184Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037409-proteinTCONS_00037409-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037409-exon-sc0001625-1491911889:80609..80866TCONS_00037409-exon-sc0001625-1491911889:80609..80866Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1510915933:80609..80866TCONS_00037409-exon-sc0001625-1510915933:80609..80866Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1575043694:80609..80866TCONS_00037409-exon-sc0001625-1575043694:80609..80866Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1491911889:81113..81236TCONS_00037409-exon-sc0001625-1491911889:81113..81236Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1510915933:81113..81236TCONS_00037409-exon-sc0001625-1510915933:81113..81236Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1575043694:81113..81236TCONS_00037409-exon-sc0001625-1575043694:81113..81236Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1491911889:81481..81807TCONS_00037409-exon-sc0001625-1491911889:81481..81807Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1510915933:81481..81807TCONS_00037409-exon-sc0001625-1510915933:81481..81807Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1575043694:81481..81807TCONS_00037409-exon-sc0001625-1575043694:81481..81807Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1491911889:81987..82169TCONS_00037409-exon-sc0001625-1491911889:81987..82169Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1510915933:81987..82169TCONS_00037409-exon-sc0001625-1510915933:81987..82169Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1575043694:81987..82169TCONS_00037409-exon-sc0001625-1575043694:81987..82169Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1491911889:82521..82675TCONS_00037409-exon-sc0001625-1491911889:82521..82675Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1510915933:82521..82675TCONS_00037409-exon-sc0001625-1510915933:82521..82675Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1575043694:82521..82675TCONS_00037409-exon-sc0001625-1575043694:82521..82675Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1491911889:82831..83835TCONS_00037409-exon-sc0001625-1491911889:82831..83835Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1510915933:82831..83835TCONS_00037409-exon-sc0001625-1510915933:82831..83835Clytia hemisphaericaexon
TCONS_00037409-exon-sc0001625-1575043694:82831..83835TCONS_00037409-exon-sc0001625-1575043694:82831..83835Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001625supercontigsc0001625:80609..83835 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	6.80144	7.24134	6.08823	10.8897	7.62415	6.26904	7.17704	8.12813	7.56632	7.16632	0	0.0351912	0	0.0296234	0	0.0214132	0.037224	0	0	0.0200663	2.12879	6.60352	0	0	0	0.0435371
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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