TCONS_00037401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037401
Unique NameTCONS_00037401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037401 ID=TCONS_00037401|Name=TCONS_00037401|organism=Clytia hemisphaerica|type=transcript|length=257bp
TTTAGCTGACGATACAACAGTAGCTTCCTATCATGTCAAATGTCCCAAAA
CACTCCGTTCAAGAGCTCAAGATGCCTATCTACTGTTTCAAGTAAATATC
TGACCTCAATTTTTGCTCCCCTctattttgtaattattattgGTACCCTt
cattaaataaaattttacaagctagatgctgaatggacctacctgatgat
gaaagttagatagcaatgcgaggagaaaaatgaaaaaaatcagtcagaaa
atatagc
Run BLAST on NCBI

transcript from alignment at sc0001623:43118..43374

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037401 ID=TCONS_00037401|Name=TCONS_00037401|organism=Clytia hemisphaerica|type=transcript|length=257bp|location=Sequence derived from alignment at sc0001623:43118..43374 (Clytia hemisphaerica)
gctatattttctgactgatttttttcatttttctcctcgcattgctatct
aactttcatcatcaggtaggtccattcagcatctagcttgtaaaatttta
tttaatgaAGGGTACcaataataattacaaaatagAGGGGAGCAAAAATT
GAGGTCAGATATTTACTTGAAACAGTAGATAGGCATCTTGAGCTCTTGAA
CGGAGTGTTTTGGGACATTTGACATGATAGGAAGCTACTGTTGTATCGTC
AGCTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022178XLOC_022178Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037401-exon-sc0001623-1491911889:43118..43374TCONS_00037401-exon-sc0001623-1491911889:43118..43374Clytia hemisphaericaexon
TCONS_00037401-exon-sc0001623-1510915933:43118..43374TCONS_00037401-exon-sc0001623-1510915933:43118..43374Clytia hemisphaericaexon
TCONS_00037401-exon-sc0001623-1575043694:43118..43374TCONS_00037401-exon-sc0001623-1575043694:43118..43374Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001623supercontigsc0001623:43118..43374 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.19502	8.73758	5.55504	5.33558	0.932912	0	0	0	22.7076	33.7253	18.8266	24.1203	24.6304	27.2195	20.292	32.7386	18.2476	23.2102	19.8949	24.2926	29.7693	23.6394	13.2181	18.5637	0	0.771341	28.0075	9.41905	24.3072	16.799
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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