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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037380 ID=TCONS_00037380|Name=TCONS_00037380|organism=Clytia hemisphaerica|type=transcript|length=909bp
CGGAATGTTATCCCCAAAAGCACGCTTTCTGaaatttatttaataaaaaG
CATAAAAACTCGATTAAGTCGCACCCTATACAACTTTTGTAAAACCTTTT
GAACGATTTTGTAGTTGATGAAGGAAATAAATTTCTGTGAAGTTACAGTA
AATGGTCACGTGATAGAATTAGTACTGCTTTCTCTTCCGACATTTCATAA
GATAAGTTGAATAAGAGAAAGTTCGAATCTTGGTGAAAATTCCACACAAT
GGGTTTGTAAGTCAAATAGTGCCGTGTGCCTGGCCCCGCTATCTTTGAga
cgaaatcatcaaaaaacgATCCTTTTATCTAAAAGTCTTTGAATCGGAAT
ATTTCGGAGGTTGGAGGTCGAAGAATTTCTTGAAATACTTAACCGAGCTA
TTCGGCAATTTATGCGGTTCATGGCGTCATTTTGCAATCAGAGAGAGTAA
TTATATTAAAAGCTCTCAGATATTTCTTCTTCTCTCAGAGTCTTTTTCGC
CCtgtcaaaatgacgtcattggtcTCATGAAAAGTAACGTTTGTTGTGCT
AATTTGgtcaaaaatggaaaattgaaaattaaatggCTACAGTGATGAAA
AGTAAAGACAAGGGTGTAAAAATAATGACTTGCAAAGTTTACATATTCAA
GTATTAGTTCATCGGGAAAATGGCGGTGGCATTTCTGCTTTTCCTTTCCT
TTGTCCTCAGTCTGCGAATGTTCACTAGCGATCGAATCGCTTTGTTTTCG
GAGAGCTCGAGTAGCCTCTCAGGGCGGATAGGAAAGAGTGcctttatatt
ttttgtattttttttttgtaatttttttttgtcatagtTTTCTCAGAAAA
TATAGCAACATGTCTTGTATTTCATCGCACATTTCTTGACTATGAAGTAT
TGGGGTCCG Run BLAST on NCBI transcript from alignment at sc0001620:17567..18616+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037380 ID=TCONS_00037380|Name=TCONS_00037380|organism=Clytia hemisphaerica|type=transcript|length=1050bp|location=Sequence derived from alignment at sc0001620:17567..18616+ (Clytia hemisphaerica)
CGGAATGTTATCCCCAAAAGCACGCTTTCTGaaatttatttaataaaaaG
CATAAAAACTCGATTAAGTCGCACCCTATACAACTTTTGTAAAACCTTTT
GAACGATTTTGTAGTTGATGAAGGAAATAAATTTCTGTGAAGTTACAGTA
AATGGTCACGTGATAGAATTAGTACTGCTTTCTCTTCCGACATCTCGTAA
GATNAATTAAGTCGTACCCTACAACTTTTGTAAAACCCTTTGAACGATTT
TGTAGTTGATGAAGGAAATAAATTTCTGTGAAGTTACAGTAAATGGTCAC
GTGATAGAACTAATGCTACTTTCTCTTCCGACATTTCATAAGATAAGTTG
AATAAGAGAAAGTTCGAATCTTGGTGAAAATTCCACACAATGGGTTTGTA
AGTCAAATAGTGCCGTGTGCCTGGCCCCGCTATCTTTGAgacgaaatcat
caaaaaacgATCCTTTTATCTAAAAGTCTTTGAATCGGAATATTTCGGAG
GTTGGAGGTCGAAGAATTTCTTGAAATACTTAACCGAGCTATTCGGCAAT
TTATGCGGTTCATGGCGTCATTTTGCAATCAGAGAGAGTAATTATATTAA
AAGCTCTCAGATATTTCTTCTTCTCTCAGAGTCTTTTTCGCCCtgtcaaa
atgacgtcattggtcTCATGAAAAGTAACGTTTGTTGTGCTAATTTGgtc
aaaaatggaaaattgaaaattaaatggCTACAGTGATGAAAAGTAAAGAC
AAGGGTGTAAAAATAATGACTTGCAAAGTTTACATATTCAAGTATTAGTT
CATCGGGAAAATGGCGGTGGCATTTCTGCTTTTCCTTTCCTTTGTCCTCA
GTCTGCGAATGTTCACTAGCGATCGAATCGCTTTGTTTTCGGAGAGCTCG
AGTAGCCTCTCAGGGCGGATAGGAAAGAGTGcctttatattttttgtatt
ttttttttgtaatttttttttgtcatagtTTTCTCAGAAAATATAGCAAC
ATGTCTTGTATTTCATCGCACATTTCTTGACTATGAAGTATTGGGGTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037380-exon-sc0001620-1491911889:17567..17757 | TCONS_00037380-exon-sc0001620-1491911889:17567..17757 | Clytia hemisphaerica | exon |
| TCONS_00037380-exon-sc0001620-1510915933:17567..17757 | TCONS_00037380-exon-sc0001620-1510915933:17567..17757 | Clytia hemisphaerica | exon |
| TCONS_00037380-exon-sc0001620-1575043694:17567..17757 | TCONS_00037380-exon-sc0001620-1575043694:17567..17757 | Clytia hemisphaerica | exon |
| TCONS_00037380-exon-sc0001620-1491911889:17899..18616 | TCONS_00037380-exon-sc0001620-1491911889:17899..18616 | Clytia hemisphaerica | exon |
| TCONS_00037380-exon-sc0001620-1510915933:17899..18616 | TCONS_00037380-exon-sc0001620-1510915933:17899..18616 | Clytia hemisphaerica | exon |
| TCONS_00037380-exon-sc0001620-1575043694:17899..18616 | TCONS_00037380-exon-sc0001620-1575043694:17899..18616 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001620 | supercontig | sc0001620:17567..18616 + |
Blast
The following BLAST results are available for this feature:
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