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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037379 ID=TCONS_00037379|Name=TCONS_00037379|organism=Clytia hemisphaerica|type=transcript|length=490bp
TTTTGTAGCACTTTTTCTTCCTCTATCTTGAAATTAACTCTGACAGAATA
CGAAATTTTGGCGTGAAAATCCCAATTATCGTGGCTTTATCTGTTGGTGG
ATAAGCATTTTAATGATGGAATTGTTTTTGCGTATCTGAAGGACCGTTGG
TGCGAATGCTTGCTTGATGTTTGTCAGAATTGGACGTGTCTTGATGAAAT
TATATGATGATAATATGGTAATGGATGGATCATCTGGAAGTGATTTCTTT
GGTTGAATGTAGCAGTATTTAAATCAGTGTATTCATTGATCTCAAAGATG
GCCTCTTCAAGCCCTGTCATCAACCGTGGCCCATGTTGCTTGGCCAGTGT
TTTAAATTATATCGTTCATTTGGAGAGAGTTGGCAAAATTAAGTTGTCTC
GATATCAATTCAATGATATTTCTTATTAAATTTTACCAAATATTTCTAAG
GGCTTTTCTCCTACTAACCAACCATTTCGATGAGGTGGgc Run BLAST on NCBI transcript from alignment at sc0001620:11238..12750+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037379 ID=TCONS_00037379|Name=TCONS_00037379|organism=Clytia hemisphaerica|type=transcript|length=1513bp|location=Sequence derived from alignment at sc0001620:11238..12750+ (Clytia hemisphaerica)
TTTTGTAGCACTTTTTCTTCCTCTATCTTGAAATTAACTCTGACAGGTAA
GATTTAGTTTATGAACCGGCTATTAGTCAGATTTCCCCCTAaggattcaa
atttttttgcttgggaAGAgagaagattcctctctagtcCTTCTTGCTTT
AAACTCAATACGAGTGTATGGTATATTTTCGGTTCTTTCACATCATACCG
TCATTTCTTTCAATTCTGGAGGTATTCAAGTGAATACGCATAAAACAGAT
AAGATCTGCGCTGTTTTTAGAATGATGGATTTTCTCTATcactttgtttg
ttttcacgtgacatatttttcgaaatctaaccgacacacatttttttcaa
tacGGCGTTCGTGTGAAAACCAAGTGGGTCATGCACTCACAATACTCAAT
TTCATccctagcccttcgggctttaaactcaatgggtccGTAAGCAAAAG
CATGATTGTTTAAAAAACATCCATTGTTTAAAAAACAATCCATGATCTAG
CTATGTCAGCAAGGGACAACCGATCTTTAGAGAATTATATACATATTTTT
AGCTTGGTAATATGTTtctaaagtctgttccaaaTTGCAGTTGGTACATT
TTGAAGGAGAAATATTGTAACTACATGTAatacctcgttgaaaagatctt
attaaaggttttatatttacataagtattcccgtttcatatcagacacat
attcatatcaggacagtgtctgcctattgttatattatgctaatATAagt
aagaaaatgtttttctttacctctttctgaccaatcttgttccacatccg
tgtcaatccaatgtgaaaaagcttatgagtaaaaattgatgagtaagcaa
acgatatcactcttattaaaaaacaaaacctttatgCGGATGTAAAATCT
TTCAcaaatttcgaaaatgaagatgtcAAAATTCAGTGGGGTTGGGAAAA
TTCAATTATTCAATTAATCTATTTATTTTGTGAATGATAGGAGAATCCAA
ATCGGCCTGTCCCTAAGTTCTTTATTCTGTTTGTTGAGATAAAAAAGATT
CTCTCTCCTTGTTTTTCAGAATACGAAATTTTGGCGTGAAAATCCCAATT
ATCGTGGCTTTATCTGTTGGTGGATAAGCATTTTAATGATGGAATTGTTT
TTGCGTATCTGAAGGACCGTTGGTGCGAATGCTTGCTTGATGTTTGTCAG
AATTGGACGTGTCTTGATGAAATTATATGATGATAATATGGTAATGGATG
GATCATCTGGAAGTGATTTCTTTGGTTGAATGTAGCAGTATTTAAATCAG
TGTATTCATTGATCTCAAAGATGGCCTCTTCAAGCCCTGTCATCAACCGT
GGCCCATGTTGCTTGGCCAGTGTTTTAAATTATATCGTTCATTTGGAGAG
AGTTGGCAAAATTAAGTTGTCTCGATATCAATTCAATGATATTTCTTATT
AAATTTTACCAAATATTTCTAAGGGCTTTTCTCCTACTAACCAACCATTT
CGATGAGGTGGgc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037379-exon-sc0001620-1491911889:11238..11283 | TCONS_00037379-exon-sc0001620-1491911889:11238..11283 | Clytia hemisphaerica | exon |
| TCONS_00037379-exon-sc0001620-1510915933:11238..11283 | TCONS_00037379-exon-sc0001620-1510915933:11238..11283 | Clytia hemisphaerica | exon |
| TCONS_00037379-exon-sc0001620-1575043694:11238..11283 | TCONS_00037379-exon-sc0001620-1575043694:11238..11283 | Clytia hemisphaerica | exon |
| TCONS_00037379-exon-sc0001620-1491911889:12307..12750 | TCONS_00037379-exon-sc0001620-1491911889:12307..12750 | Clytia hemisphaerica | exon |
| TCONS_00037379-exon-sc0001620-1510915933:12307..12750 | TCONS_00037379-exon-sc0001620-1510915933:12307..12750 | Clytia hemisphaerica | exon |
| TCONS_00037379-exon-sc0001620-1575043694:12307..12750 | TCONS_00037379-exon-sc0001620-1575043694:12307..12750 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001620 | supercontig | sc0001620:11238..12750 + |
Blast
The following BLAST results are available for this feature:
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