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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037329 ID=TCONS_00037329|Name=TCONS_00037329|organism=Clytia hemisphaerica|type=transcript|length=903bp
GTTTTTTCTGCTTGACCAAAGAACTTTTCGTGACATTTTAGGGTAACTTT
ATACTTCTCACAATGGTATATTGCAATTCTAGTTtcttttggtgattttt
tcaGGACTTCTGCTTCAAATGTTTCAACTGCCATTTTTTTGTCGTTTATC
GGTATCTTGCATTTTTTCTTTgacggaaatttgaaaattccttTCGATCG
TACTCTTGAACAATCATAAATGGGACCAAGTGAGATGCTCGTTATCTGAG
CCACCATGTATAACAAAATGGTGAGCATAAGTAATTTCGAGGAGAAATTT
GAAACTCTTGTTTTTCTTCTCTGCTTATCTGTTGTGACTTGTCCAACTTC
TTTGTCATCAACGAATTTGGTATCTGGTTGTGGTTTGTTTTGTGGCTGTT
CTACGGTTTGATTATCGTCATTGATTATGccttcttcttcttcgattTCT
TCAACGCCTTCGTTTTCGTCCATGTCTTCAATTTCTTCAACATCTTCAAA
GGTAGCTCTGTCAGTGATTTTTTTCATACGGTTTACATGTACTGGTGACT
GCTGTGTTTTACCTCGTTCATCTGTAATTCTAAACAGCACTGGAGACAAT
CTATCCTTGAGAATATATGGGCCTTGGTACTTTACTGATAACTTCGGGCT
GAGTCCTTTTGTTTTCGACTTTTTACTAATCATTACTTTATCTCCTACTT
GAAAGTTTGTGTCTCCTGCAGTCtcgtcatattttccttttgtcTTTTTA
CCTGAAGCTTCGAGTCTGTCATTAACATTTTGTCTAGCTATTGTAACTGA
CTGTAAAAGTTGATATCTGTATTCTTCAATTGTCGGTGCCACCTTTGACG
GTTTAAGTAAAGATACATCCGGGGGCATTGTTGCTTGTCTTCCATACACC
AAA Run BLAST on NCBI protein sequence of TCONS_00037329-protein >TCONS_00037329-protein ID=TCONS_00037329-protein|Name=TCONS_00037329-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
LVYGRQATMPPDVSLLKPSKVAPTIEEYRYQLLQSVTIARQNVNDRLEAS
GKKTKGKYDETAGDTNFQVGDKVMISKKSKTKGLSPKLSVKYQGPYILKD
RLSPVLFRITDERGKTQQSPVHVNRMKKITDRATFEDVEEIEDMDENEGV
EEIEEEEGIINDDNQTVEQPQNKPQPDTKFVDDKEVGQVTTDKQRRKTRV
SNFSSKLLMLTILLYMVAQITSISLGPIYDCSRVRSKGIFKFPSKKKCKI
PINDKKMAVETFEAEVLKKSPKETRIAIYHCEKYKVTLKCHEKFFGQAEK Run BLAST on NCBI transcript from alignment at sc0001613:31251..32153 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037329 ID=TCONS_00037329|Name=TCONS_00037329|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at sc0001613:31251..32153 (Clytia hemisphaerica)
TTTGGTGTATGGAAGACAAGCAACAATGCCCCCGGATGTATCTTTACTTA
AACCGTCAAAGGTGGCACCGACAATTGAAGAATACAGATATCAACTTTTA
CAGTCAGTTACAATAGCTAGACAAAATGTTAATGACAGACTCGAAGCTTC
AGGTAAAAAgacaaaaggaaaatatgacgaGACTGCAGGAGACACAAACT
TTCAAGTAGGAGATAAAGTAATGATTAGTAAAAAGTCGAAAACAAAAGGA
CTCAGCCCGAAGTTATCAGTAAAGTACCAAGGCCCATATATTCTCAAGGA
TAGATTGTCTCCAGTGCTGTTTAGAATTACAGATGAACGAGGTAAAACAC
AGCAGTCACCAGTACATGTAAACCGTATGAAAAAAATCACTGACAGAGCT
ACCTTTGAAGATGTTGAAGAAATTGAAGACATGGACGAAAACGAAGGCGT
TGAAGAaatcgaagaagaagaaggCATAATCAATGACGATAATCAAACCG
TAGAACAGCCACAAAACAAACCACAACCAGATACCAAATTCGTTGATGAC
AAAGAAGTTGGACAAGTCACAACAGATAAGCAGAGAAGAAAAACAAGAGT
TTCAAATTTCTCCTCGAAATTACTTATGCTCACCATTTTGTTATACATGG
TGGCTCAGATAACGAGCATCTCACTTGGTCCCATTTATGATTGTTCAAGA
GTACGATCGAaaggaattttcaaatttccgtcAAAGAAAAAATGCAAGAT
ACCGATAAACGACAAAAAAATGGCAGTTGAAACATTTGAAGCAGAAGTCC
tgaaaaaatcaccaaaagaAACTAGAATTGCAATATACCATTGTGAGAAG
TATAAAGTTACCCTAAAATGTCACGAAAAGTTCTTTGGTCAAGCAGAAAA
AAC Coding sequence (CDS) from alignment at sc0001613:31251..32153 >TCONS_00037329 ID=TCONS_00037329|Name=TCONS_00037329|organism=Clytia hemisphaerica|type=CDS|length=900bp|location=Sequence derived from alignment at sc0001613:31251..32153 (Clytia hemisphaerica)
TTGGTGTATGGAAGACAAGCAACAATGCCCCCGGATGTATCTTTACTTAA
ACCGTCAAAGGTGGCACCGACAATTGAAGAATACAGATATCAACTTTTAC
AGTCAGTTACAATAGCTAGACAAAATGTTAATGACAGACTCGAAGCTTCA
GGTAAAAAgacaaaaggaaaatatgacgaGACTGCAGGAGACACAAACTT
TCAAGTAGGAGATAAAGTAATGATTAGTAAAAAGTCGAAAACAAAAGGAC
TCAGCCCGAAGTTATCAGTAAAGTACCAAGGCCCATATATTCTCAAGGAT
AGATTGTCTCCAGTGCTGTTTAGAATTACAGATGAACGAGGTAAAACACA
GCAGTCACCAGTACATGTAAACCGTATGAAAAAAATCACTGACAGAGCTA
CCTTTGAAGATGTTGAAGAAATTGAAGACATGGACGAAAACGAAGGCGTT
GAAGAaatcgaagaagaagaaggCATAATCAATGACGATAATCAAACCGT
AGAACAGCCACAAAACAAACCACAACCAGATACCAAATTCGTTGATGACA
AAGAAGTTGGACAAGTCACAACAGATAAGCAGAGAAGAAAAACAAGAGTT
TCAAATTTCTCCTCGAAATTACTTATGCTCACCATTTTGTTATACATGGT
GGCTCAGATAACGAGCATCTCACTTGGTCCCATTTATGATTGTTCAAGAG
TACGATCGAaaggaattttcaaatttccgtcAAAGAAAAAATGCAAGATA
CCGATAAACGACAAAAAAATGGCAGTTGAAACATTTGAAGCAGAAGTCCt
gaaaaaatcaccaaaagaAACTAGAATTGCAATATACCATTGTGAGAAGT
ATAAAGTTACCCTAAAATGTCACGAAAAGTTCTTTGGTCAAGCAGAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037329-exon-sc0001613-1491911889:31251..32153 | TCONS_00037329-exon-sc0001613-1491911889:31251..32153 | Clytia hemisphaerica | exon |
| TCONS_00037329-exon-sc0001613-1510915933:31251..32153 | TCONS_00037329-exon-sc0001613-1510915933:31251..32153 | Clytia hemisphaerica | exon |
| TCONS_00037329-exon-sc0001613-1575043694:31251..32153 | TCONS_00037329-exon-sc0001613-1575043694:31251..32153 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001613 | supercontig | sc0001613:31251..32153 . |
Blast
The following BLAST results are available for this feature:
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