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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037325 ID=TCONS_00037325|Name=TCONS_00037325|organism=Clytia hemisphaerica|type=transcript|length=1068bp
TGTTTCCAAGTACCTGGAAGATCATGAAAATGCAAAGGCTGAGCCAGACA
AAAGTGGGCCAGAGTATCACGTCAAGAAAGAACCAGTTGAGCAAGTCAAC
CACAGTACAACATCAGAAATTCTGACCTTGATGAGAAGAACGAAAGCACC
CTCCATCGAGTTAGAGGTATTTTCAGGAAGTTCAACTGACTACCCATACT
TCATTGCTACCTTCACACAAGTTGTAGAGGAGAACATTTTGAATAACAGA
GAACGTTTGACATTGTTAGTCAAGTACACCAAAGGAGACGTAAAGGAGCT
TGTGAAGTCTTGTATCTATTTGGCAGACATTGTTTGCTATTCGAAAGCAA
AAGAACTAATTGAGAGGAAGTTTGGAAGTCCTTTCAAGATAGCAGCTGAT
TATAGAAAGCAACTAGCAGAATGGCCAAGAGTGAAGCCAAGTGATGCTAC
TTCGTTGAATAGATTTGAGACGTTCTTGCTTAAATACCAATCATCCATGG
CAAGTATCGGTCGAGCTAGTGAGAACAGCCCAGAATTGTTACAACTTCTT
CAAAGCAAACTGCCAACGTACCTACAAGACCGATGGAATCGTACTGCATA
CAAAGTCAGGTCCAAGCATGAAAGGGAACCTGGCTTAGAAAATTTTGTCG
ATCTGATCAGCAAAGAGACCGTACTCCTTGACGATCCGTTGTATTCTAGG
GAGGCAATCAGTGACCTTTCAAGAACACGACCAACAACAAGAGACAAGAT
CGACAAAGATTCAGAAGTAACCTCATCTCAATGGATAAATGCATTTGTTG
TAACTACAAAACACCGCACGATTTGGAGAAATGTCAAGACTACAACAAGA
TGGATCTAGCTGACCGCAAGAGGTTCATTTTCCGCAAACGCTTATGCTTC
TGCTGTTTGAAACCAACCGATTCTTCGCACAATGCCAAAAGTTGTAAGAA
CAAGCGAACCTGTGCTGTTTGCAGCAATTCACATCCAACAACTCTCCATG
AATACAGATTCACTCGAACGACACCACCATCAGCAAATCCTACTGTTTCG
ACTATCATTACTCCTCAA Run BLAST on NCBI protein sequence of TCONS_00037325-protein >TCONS_00037325-protein ID=TCONS_00037325-protein|Name=TCONS_00037325-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
VSKYLEDHENAKAEPDKSGPEYHVKKEPVEQVNHSTTSEILTLMRRTKAP
SIELEVFSGSSTDYPYFIATFTQVVEENILNNRERLTLLVKYTKGDVKEL
VKSCIYLADIVCYSKAKELIERKFGSPFKIAADYRKQLAEWPRVKPSDAT
SLNRFETFLLKYQSSMASIGRASENSPELLQLLQSKLPTYLQDRWNRTAY
KVRSKHEREPGLENFVDLISKETVLLDDPLYSREAISDLSRTRPTTRDKI
DKDSEVTSSQWINAFVVTTKHRTIWRNVKTTTRWI Run BLAST on NCBI transcript from alignment at sc0001613:2..1069 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037325 ID=TCONS_00037325|Name=TCONS_00037325|organism=Clytia hemisphaerica|type=transcript|length=1068bp|location=Sequence derived from alignment at sc0001613:2..1069 (Clytia hemisphaerica)
TTGAGGAGTAATGATAGTCGAAACAGTAGGATTTGCTGATGGTGGTGTCG
TTCGAGTGAATCTGTATTCATGGAGAGTTGTTGGATGTGAATTGCTGCAA
ACAGCACAGGTTCGCTTGTTCTTACAACTTTTGGCATTGTGCGAAGAATC
GGTTGGTTTCAAACAGCAGAAGCATAAGCGTTTGCGGAAAATGAACCTCT
TGCGGTCAGCTAGATCCATCTTGTTGTAGTCTTGACATTTCTCCAAATCG
TGCGGTGTTTTGTAGTTACAACAAATGCATTTATCCATTGAGATGAGGTT
ACTTCTGAATCTTTGTCGATCTTGTCTCTTGTTGTTGGTCGTGTTCTTGA
AAGGTCACTGATTGCCTCCCTAGAATACAACGGATCGTCAAGGAGTACGG
TCTCTTTGCTGATCAGATCGACAAAATTTTCTAAGCCAGGTTCCCTTTCA
TGCTTGGACCTGACTTTGTATGCAGTACGATTCCATCGGTCTTGTAGGTA
CGTTGGCAGTTTGCTTTGAAGAAGTTGTAACAATTCTGGGCTGTTCTCAC
TAGCTCGACCGATACTTGCCATGGATGATTGGTATTTAAGCAAGAACGTC
TCAAATCTATTCAACGAAGTAGCATCACTTGGCTTCACTCTTGGCCATTC
TGCTAGTTGCTTTCTATAATCAGCTGCTATCTTGAAAGGACTTCCAAACT
TCCTCTCAATTAGTTCTTTTGCTTTCGAATAGCAAACAATGTCTGCCAAA
TAGATACAAGACTTCACAAGCTCCTTTACGTCTCCTTTGGTGTACTTGAC
TAACAATGTCAAACGTTCTCTGTTATTCAAAATGTTCTCCTCTACAACTT
GTGTGAAGGTAGCAATGAAGTATGGGTAGTCAGTTGAACTTCCTGAAAAT
ACCTCTAACTCGATGGAGGGTGCTTTCGTTCTTCTCATCAAGGTCAGAAT
TTCTGATGTTGTACTGTGGTTGACTTGCTCAACTGGTTCTTTCTTGACGT
GATACTCTGGCCCACTTTTGTCTGGCTCAGCCTTTGCATTTTCATGATCT
TCCAGGTACTTGGAAACA Coding sequence (CDS) from alignment at sc0001613:2..1069 >TCONS_00037325 ID=TCONS_00037325|Name=TCONS_00037325|organism=Clytia hemisphaerica|type=CDS|length=858bp|location=Sequence derived from alignment at sc0001613:2..1069 (Clytia hemisphaerica)
CTAGATCCATCTTGTTGTAGTCTTGACATTTCTCCAAATCGTGCGGTGTT
TTGTAGTTACAACAAATGCATTTATCCATTGAGATGAGGTTACTTCTGAA
TCTTTGTCGATCTTGTCTCTTGTTGTTGGTCGTGTTCTTGAAAGGTCACT
GATTGCCTCCCTAGAATACAACGGATCGTCAAGGAGTACGGTCTCTTTGC
TGATCAGATCGACAAAATTTTCTAAGCCAGGTTCCCTTTCATGCTTGGAC
CTGACTTTGTATGCAGTACGATTCCATCGGTCTTGTAGGTACGTTGGCAG
TTTGCTTTGAAGAAGTTGTAACAATTCTGGGCTGTTCTCACTAGCTCGAC
CGATACTTGCCATGGATGATTGGTATTTAAGCAAGAACGTCTCAAATCTA
TTCAACGAAGTAGCATCACTTGGCTTCACTCTTGGCCATTCTGCTAGTTG
CTTTCTATAATCAGCTGCTATCTTGAAAGGACTTCCAAACTTCCTCTCAA
TTAGTTCTTTTGCTTTCGAATAGCAAACAATGTCTGCCAAATAGATACAA
GACTTCACAAGCTCCTTTACGTCTCCTTTGGTGTACTTGACTAACAATGT
CAAACGTTCTCTGTTATTCAAAATGTTCTCCTCTACAACTTGTGTGAAGG
TAGCAATGAAGTATGGGTAGTCAGTTGAACTTCCTGAAAATACCTCTAAC
TCGATGGAGGGTGCTTTCGTTCTTCTCATCAAGGTCAGAATTTCTGATGT
TGTACTGTGGTTGACTTGCTCAACTGGTTCTTTCTTGACGTGATACTCTG
GCCCACTTTTGTCTGGCTCAGCCTTTGCATTTTCATGATCTTCCAGGTAC
TTGGAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037325-exon-sc0001613-1491911889:2..1069 | TCONS_00037325-exon-sc0001613-1491911889:2..1069 | Clytia hemisphaerica | exon |
| TCONS_00037325-exon-sc0001613-1510915933:2..1069 | TCONS_00037325-exon-sc0001613-1510915933:2..1069 | Clytia hemisphaerica | exon |
| TCONS_00037325-exon-sc0001613-1575043694:2..1069 | TCONS_00037325-exon-sc0001613-1575043694:2..1069 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001613 | supercontig | sc0001613:2..1069 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
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| IPR005312 | DUF1759 |
Blast
The following BLAST results are available for this feature:
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