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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037257 ID=TCONS_00037257|Name=TCONS_00037257|organism=Clytia hemisphaerica|type=transcript|length=960bp
CTTACATCTTCTGTGTTGTTTGGTCTCCCTCCTTCTTGGATGTTTCTGAT
CTTGTCTGGGTCTGCTGTGACGCCATTGGAGTGAAAGTCTCTTCCAAACC
ACTTGACTCGGGTTAAACAGAAGTTGGATTTCGAGAGTTTGAGGATGATT
CATGTTTCAGCACATCTCTCCAACACTTGTTTCAGGTTGTTGTAGTGATC
TTTGTAGTCCTTGCCAAAGACCAGTATGTTGTCGTGGAGGGTGACAACAC
CTCTGAGGCCAGCGAAGCATTTTCTGACTTCGTTGTGGAATATGCCACTT
GATGCTGTTGGACCGAAGTAGAGACGTTCCATTCGATGGATGCCTTCATG
GGTCTGGAAGATGCTCTTTTTCTTTGTAGCTTCGTCTAGTGGTAGTTGAT
GGAATCCCCAACCCATGTCCATCTCACTGAACACTGTGGCTTCCTTTAGT
TCGTGACGTATCTCTTGTGGTGTTTGGACGTGAAATTTGGTCCGTTGCAT
CCCTGGGTTTCTGGGCGTGTTGTCGATGTTCATGCGTATCTGGCCGTTTT
TCTTGTCTGTGATGACCACGTTCATTACGCAGTCGTAGCTGTTGCGTGGA
TCAACGTCTGTTATGACCCCTTGTTTTCGAAGGAAGTCAAGTAGTTTGCT
CACGTCTTCTTGGTAGTGGAATGGGATGTTTCTGAACGGTTGCTGTTTCG
GCTTGAAGTCTTTGGCGTACTCGAGGTGTATGGGTTCGATCTTGAGACAT
CCGACCTTGTTGTCGTCGAAGACTAGATCTCTAAACTTTTCGACGAGTGT
CTGTACTTTAGCTTGTTCTTGTGGATCAGCTGTGGTGTCTGGTGGATGTG
TTTCTACATCTACTTCAAGGTCTCGTCGAATCTTGCTTGGGATTCGTCTG
ATTGAAGTTCCTGTCGGTTCCTTGCCCTCTTTGTTGAACGTGATGATCCC
TAGCTTCTCT Run BLAST on NCBI protein sequence of TCONS_00037257-protein >TCONS_00037257-protein ID=TCONS_00037257-protein|Name=TCONS_00037257-protein|organism=Clytia hemisphaerica|type=polypeptide|length=269bp
EKLGIITFNKEGKEPTGTSIRRIPSKIRRDLEVDVETHPPDTTADPQEQA
KVQTLVEKFRDLVFDDNKVGCLKIEPIHLEYAKDFKPKQQPFRNIPFHYQ
EDVSKLLDFLRKQGVITDVDPRNSYDCVMNVVITDKKNGQIRMNIDNTPR
NPGMQRTKFHVQTPQEIRHELKEATVFSEMDMGWGFHQLPLDEATKKKSI
FQTHEGIHRMERLYFGPTASSGIFHNEVRKCFAGLRGVVTLHDNILVFGK
DYKDHYNNLKQVLERCAET Run BLAST on NCBI transcript from alignment at sc0001600:6830..7789 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037257 ID=TCONS_00037257|Name=TCONS_00037257|organism=Clytia hemisphaerica|type=transcript|length=960bp|location=Sequence derived from alignment at sc0001600:6830..7789 (Clytia hemisphaerica)
AGAGAAGCTAGGGATCATCACGTTCAACAAAGAGGGCAAGGAACCGACAG
GAACTTCAATCAGACGAATCCCAAGCAAGATTCGACGAGACCTTGAAGTA
GATGTAGAAACACATCCACCAGACACCACAGCTGATCCACAAGAACAAGC
TAAAGTACAGACACTCGTCGAAAAGTTTAGAGATCTAGTCTTCGACGACA
ACAAGGTCGGATGTCTCAAGATCGAACCCATACACCTCGAGTACGCCAAA
GACTTCAAGCCGAAACAGCAACCGTTCAGAAACATCCCATTCCACTACCA
AGAAGACGTGAGCAAACTACTTGACTTCCTTCGAAAACAAGGGGTCATAA
CAGACGTTGATCCACGCAACAGCTACGACTGCGTAATGAACGTGGTCATC
ACAGACAAGAAAAACGGCCAGATACGCATGAACATCGACAACACGCCCAG
AAACCCAGGGATGCAACGGACCAAATTTCACGTCCAAACACCACAAGAGA
TACGTCACGAACTAAAGGAAGCCACAGTGTTCAGTGAGATGGACATGGGT
TGGGGATTCCATCAACTACCACTAGACGAAGCTACAAAGAAAAAGAGCAT
CTTCCAGACCCATGAAGGCATCCATCGAATGGAACGTCTCTACTTCGGTC
CAACAGCATCAAGTGGCATATTCCACAACGAAGTCAGAAAATGCTTCGCT
GGCCTCAGAGGTGTTGTCACCCTCCACGACAACATACTGGTCTTTGGCAA
GGACTACAAAGATCACTACAACAACCTGAAACAAGTGTTGGAGAGATGTG
CTGAAACATGAATCATCCTCAAACTCTCGAAATCCAACTTCTGTTTAACC
CGAGTCAAGTGGTTTGGAAGAGACTTTCACTCCAATGGCGTCACAGCAGA
CCCAGACAAGATCAGAAACATCCAAGAAGGAGGGAGACCAAACAACACAG
AAGATGTAAG Coding sequence (CDS) from alignment at sc0001600:6830..7789 >TCONS_00037257 ID=TCONS_00037257|Name=TCONS_00037257|organism=Clytia hemisphaerica|type=CDS|length=810bp|location=Sequence derived from alignment at sc0001600:6830..7789 (Clytia hemisphaerica)
GAGAAGCTAGGGATCATCACGTTCAACAAAGAGGGCAAGGAACCGACAGG
AACTTCAATCAGACGAATCCCAAGCAAGATTCGACGAGACCTTGAAGTAG
ATGTAGAAACACATCCACCAGACACCACAGCTGATCCACAAGAACAAGCT
AAAGTACAGACACTCGTCGAAAAGTTTAGAGATCTAGTCTTCGACGACAA
CAAGGTCGGATGTCTCAAGATCGAACCCATACACCTCGAGTACGCCAAAG
ACTTCAAGCCGAAACAGCAACCGTTCAGAAACATCCCATTCCACTACCAA
GAAGACGTGAGCAAACTACTTGACTTCCTTCGAAAACAAGGGGTCATAAC
AGACGTTGATCCACGCAACAGCTACGACTGCGTAATGAACGTGGTCATCA
CAGACAAGAAAAACGGCCAGATACGCATGAACATCGACAACACGCCCAGA
AACCCAGGGATGCAACGGACCAAATTTCACGTCCAAACACCACAAGAGAT
ACGTCACGAACTAAAGGAAGCCACAGTGTTCAGTGAGATGGACATGGGTT
GGGGATTCCATCAACTACCACTAGACGAAGCTACAAAGAAAAAGAGCATC
TTCCAGACCCATGAAGGCATCCATCGAATGGAACGTCTCTACTTCGGTCC
AACAGCATCAAGTGGCATATTCCACAACGAAGTCAGAAAATGCTTCGCTG
GCCTCAGAGGTGTTGTCACCCTCCACGACAACATACTGGTCTTTGGCAAG
GACTACAAAGATCACTACAACAACCTGAAACAAGTGTTGGAGAGATGTGC
TGAAACATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037257-exon-sc0001600-1491911889:6830..7789 | TCONS_00037257-exon-sc0001600-1491911889:6830..7789 | Clytia hemisphaerica | exon |
| TCONS_00037257-exon-sc0001600-1510915933:6830..7789 | TCONS_00037257-exon-sc0001600-1510915933:6830..7789 | Clytia hemisphaerica | exon |
| TCONS_00037257-exon-sc0001600-1575043694:6830..7789 | TCONS_00037257-exon-sc0001600-1575043694:6830..7789 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001600 | supercontig | sc0001600:6830..7789 . |
Blast
The following BLAST results are available for this feature:
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