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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037233 ID=TCONS_00037233|Name=TCONS_00037233|organism=Clytia hemisphaerica|type=transcript|length=723bp
TTCAGACTTGATAACATCTTGTTTGTCTTGTTCGTACTTGTTGAGTCGGT
TGACTTGTTGAAGGTAAACTTTTATCGCCTTGTTTCGATTTGGTTCAAGA
CGATTTGTTGGGTCTTTTGTGAATGGTAGAGTAGCAGTCGTGATTTTATT
TTCGATGTCGACGTGAACTGATTTGTTGATGAGGTGCTGTTCGACTTCTT
CACGAATGCTGCTGGTCTGGTTGAAGTCGTGATCTTTGCAGTCGGAGCAT
GATCGACATTTGATGCAACGGTATGAGATGTCACTTCCTGCGTCCTCTGC
CATGTTGAAGATGCTTTCACGTTTGACATGTGATNTGAAGTCGTGATCTT
TGCAGTCGGAGCATGATCGACATTTGATGCAACGGTATGAGATGTCACTT
CCTGCGTCCTCTGCCATGTTGAAGATGCTTTCACGTTTGACATGTGATTC
GACGTTGACGTGGTTGGAGCTGTATCCCAATAATCGAACATCAGGATTGA
CTTGATATCCTACTTGATAAGATCGAAGTTGATTAGAAAAGAACGAAGTG
AAGTGTATACCTTGCTTGTTGATTGATGAGATTATTTGATGAGGTCCACC
AATAACACCCCGACTTCCATCTGGATTCTTGAATGCGGATTTATAAATCG
TCAATCCAGAAGGCATTTTGAAGATTGGTTCGGGATGGTAACGTAGAAAT
CTGATGCCGATCATCAGGTCGAC Run BLAST on NCBI protein sequence of TCONS_00037233-protein >TCONS_00037233-protein ID=TCONS_00037233-protein|Name=TCONS_00037233-protein|organism=Clytia hemisphaerica|type=polypeptide|length=241bp
VDLMIGIRFLRYHPEPIFKMPSGLTIYKSAFKNPDGSRGVIGGPHQIISS
INKQGIHFTSFFSNQLRSYQVGYQVNPDVRLLGYSSNHVNVESHVKRESI
FNMAEDAGSDISYRCIKCRSCSDCKDHDFXSHVKRESIFNMAEDAGSDIS
YRCIKCRSCSDCKDHDFNQTSSIREEVEQHLINKSVHVDIENKITTATLP
FTKDPTNRLEPNRNKAIKVYLQQVNRLNKYEQDKQDVIKSE Run BLAST on NCBI transcript from alignment at sc0001594:6932..7654 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037233 ID=TCONS_00037233|Name=TCONS_00037233|organism=Clytia hemisphaerica|type=transcript|length=723bp|location=Sequence derived from alignment at sc0001594:6932..7654 (Clytia hemisphaerica)
GTCGACCTGATGATCGGCATCAGATTTCTACGTTACCATCCCGAACCAAT
CTTCAAAATGCCTTCTGGATTGACGATTTATAAATCCGCATTCAAGAATC
CAGATGGAAGTCGGGGTGTTATTGGTGGACCTCATCAAATAATCTCATCA
ATCAACAAGCAAGGTATACACTTCACTTCGTTCTTTTCTAATCAACTTCG
ATCTTATCAAGTAGGATATCAAGTCAATCCTGATGTTCGATTATTGGGAT
ACAGCTCCAACCACGTCAACGTCGAATCACATGTCAAACGTGAAAGCATC
TTCAACATGGCAGAGGACGCAGGAAGTGACATCTCATACCGTTGCATCAA
ATGTCGATCATGCTCCGACTGCAAAGATCACGACTTCANATCACATGTCA
AACGTGAAAGCATCTTCAACATGGCAGAGGACGCAGGAAGTGACATCTCA
TACCGTTGCATCAAATGTCGATCATGCTCCGACTGCAAAGATCACGACTT
CAACCAGACCAGCAGCATTCGTGAAGAAGTCGAACAGCACCTCATCAACA
AATCAGTTCACGTCGACATCGAAAATAAAATCACGACTGCTACTCTACCA
TTCACAAAAGACCCAACAAATCGTCTTGAACCAAATCGAAACAAGGCGAT
AAAAGTTTACCTTCAACAAGTCAACCGACTCAACAAGTACGAACAAGACA
AACAAGATGTTATCAAGTCTGAA Coding sequence (CDS) from alignment at sc0001594:6932..7654 >TCONS_00037233 ID=TCONS_00037233|Name=TCONS_00037233|organism=Clytia hemisphaerica|type=CDS|length=723bp|location=Sequence derived from alignment at sc0001594:6932..7654 (Clytia hemisphaerica)
GTCGACCTGATGATCGGCATCAGATTTCTACGTTACCATCCCGAACCAAT
CTTCAAAATGCCTTCTGGATTGACGATTTATAAATCCGCATTCAAGAATC
CAGATGGAAGTCGGGGTGTTATTGGTGGACCTCATCAAATAATCTCATCA
ATCAACAAGCAAGGTATACACTTCACTTCGTTCTTTTCTAATCAACTTCG
ATCTTATCAAGTAGGATATCAAGTCAATCCTGATGTTCGATTATTGGGAT
ACAGCTCCAACCACGTCAACGTCGAATCACATGTCAAACGTGAAAGCATC
TTCAACATGGCAGAGGACGCAGGAAGTGACATCTCATACCGTTGCATCAA
ATGTCGATCATGCTCCGACTGCAAAGATCACGACTTCANATCACATGTCA
AACGTGAAAGCATCTTCAACATGGCAGAGGACGCAGGAAGTGACATCTCA
TACCGTTGCATCAAATGTCGATCATGCTCCGACTGCAAAGATCACGACTT
CAACCAGACCAGCAGCATTCGTGAAGAAGTCGAACAGCACCTCATCAACA
AATCAGTTCACGTCGACATCGAAAATAAAATCACGACTGCTACTCTACCA
TTCACAAAAGACCCAACAAATCGTCTTGAACCAAATCGAAACAAGGCGAT
AAAAGTTTACCTTCAACAAGTCAACCGACTCAACAAGTACGAACAAGACA
AACAAGATGTTATCAAGTCTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037233-exon-sc0001594-1491911889:6932..7654 | TCONS_00037233-exon-sc0001594-1491911889:6932..7654 | Clytia hemisphaerica | exon |
| TCONS_00037233-exon-sc0001594-1510915933:6932..7654 | TCONS_00037233-exon-sc0001594-1510915933:6932..7654 | Clytia hemisphaerica | exon |
| TCONS_00037233-exon-sc0001594-1575043694:6932..7654 | TCONS_00037233-exon-sc0001594-1575043694:6932..7654 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001594 | supercontig | sc0001594:6932..7654 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012675 | Beta-grasp_dom |
Blast
The following BLAST results are available for this feature:
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