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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037230 ID=TCONS_00037230|Name=TCONS_00037230|organism=Clytia hemisphaerica|type=transcript|length=423bp
TGCATTTGCTGtttctttagcttttttgacaatattagttagaagggatt
gttttcctcaaggcccacaaacaaattctaactttgattttttggaaatt
ttattcaacttgATGCCTGACACCTGGAGCTTGAAGTAGCATCTAAAGtc
aatttttcagcttgGCACTTGAGTGACATATTTCAATAACCAATGCATTt
ctacaaaattcaaccaacacctttcacGATATCAGACCGACACCCTCTAC
GGTGACTAAACAACACTTTCTGCGATATCTAAATAACACTTTCCACGGCG
GCTGATCAACACTTTCCATTATGACTGAAGAAAACCATCCACGATATCTG
AACAACAATTTCCACAACAGATCTGAACAACGACACCTTCTATGATACAA
AAGCAGTACTCAAGCATCTTGAA Run BLAST on NCBI transcript from alignment at sc0001592:68280..69829+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037230 ID=TCONS_00037230|Name=TCONS_00037230|organism=Clytia hemisphaerica|type=transcript|length=1550bp|location=Sequence derived from alignment at sc0001592:68280..69829+ (Clytia hemisphaerica)
TGCATTTGCTGtttctttagcttttttgacaatattagttagaagggatt
gttttcctcaaggcccacaaacaaattctaactttgattttttggaaatt
ttattcaacttgATGCCTGACACCTGGAGCTTGAAGTAGCATCTAAAGGT
AAGGTTTACATTCACTGCATTTTGTAGTTTCTTTTATGTTAGCAGGAATC
AGTTGAGActgaaatattgactttttccCAGTTCTGTCAAGTATGATTTT
GTGCacgtcaaaaatcttcaatctctGTAAAGTTTCTTCNTATGGCAGCA
ACACTTTTTAAACTCTGCAGCTTgtaaaaagatgtttttttcgGCAGACG
ATAAAGCGATAATCAAACACTATATTGGaaatagacgatgctatcgtccg
tataatatgctataattatgatataacatagtttgtatattataaaacgt
aatatgtttcgcggcggatagagtctgtgtttacggaCGATATCAATTTG
GCGCTTTTCTTGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTGCAGATTTATAGACGAACTTGGTAGagaaaaccaaaacaacacaa
aatcgAAGGGAAGGTGCAAGTAGGGAGTGAACAAaaaatggttgttttct
ttGAGTATGATGGTTCTGGGTCTGGTGCAGAAGAATGCTCTTGAAGGATA
ATTTGGAGGCTGAAGACCTTACATAAATGCATTTGCTGtttctttagctt
ttttgacaatattttagttagaagggattgttttcctcaaggcccacaaa
caaattctaactttgattttttggaaattttattcaacttgATGCCTGAC
ACCTGAAGCTTGAAGTAGCATCTAAAGGTAAGGTTTACATTCACTGCATT
TTGTAGTTTCTTTTATGTTAGCAGGAATCAGTGTCAGTTGAGActgaaat
attgactttttccCAGTTCTGTCAAGTATGATTTTGTGCACGTCAAAAAT
CTTTAATCTCTGTAAAGTTTCTTCTGAGAAAGAAGGCCTAAATTTTAATA
GATACTactttctgtttatttttttgttgggcTTGATTGAGTTTAAAGTT
AGctatcttttatattttttgatagtcaatttttcagcttgGCACTTGAG
TGACATATTTCAATAACCAATGCATTtctacaaaattcaaccaacacctt
tcacGATATCAGACCGACACCCTCTACGGTGACTAAACAACACTTTCTGC
GATATCTAAATAACACTTTCCACGGCGGCTGATCAACACTTTCCATTATG
ACTGAAGAAAACCATCCACGATATCTGAACAACAATTTCCACAACAGATC
TGAACAACGACACCTTCTATGATACAAAAGCAGTACTCAAGCATCTTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037230-exon-sc0001592-1491911889:68280..68427 | TCONS_00037230-exon-sc0001592-1491911889:68280..68427 | Clytia hemisphaerica | exon |
| TCONS_00037230-exon-sc0001592-1510915933:68280..68427 | TCONS_00037230-exon-sc0001592-1510915933:68280..68427 | Clytia hemisphaerica | exon |
| TCONS_00037230-exon-sc0001592-1575043694:68280..68427 | TCONS_00037230-exon-sc0001592-1575043694:68280..68427 | Clytia hemisphaerica | exon |
| TCONS_00037230-exon-sc0001592-1491911889:69555..69829 | TCONS_00037230-exon-sc0001592-1491911889:69555..69829 | Clytia hemisphaerica | exon |
| TCONS_00037230-exon-sc0001592-1510915933:69555..69829 | TCONS_00037230-exon-sc0001592-1510915933:69555..69829 | Clytia hemisphaerica | exon |
| TCONS_00037230-exon-sc0001592-1575043694:69555..69829 | TCONS_00037230-exon-sc0001592-1575043694:69555..69829 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001592 | supercontig | sc0001592:68280..69829 + |
Blast
The following BLAST results are available for this feature:
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