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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037216 ID=TCONS_00037216|Name=TCONS_00037216|organism=Clytia hemisphaerica|type=transcript|length=1466bp
taattgaaaatttgacccaAAGTTTAGACGCCATCATTTAATGatgcttt
gcaaaaaaaaatcaaaaccaagcCGAGACAAGCATTGAATTCGATTTAGC
AATGTTGATATATTCTTAGACTGTCTATTTGAAAAGTTTCCTGGTTGCAA
AcgcaattaaaaaatttcagtggaCGTCCAATCAAAAAACTACATGTAGG
ACTGACTGCACTTACATTTATTAGTGGTACAGACAGTGTTATGGAAATTT
CCACATCGTCTTTCCATTTTAGATTCATGTTACGAAGAGGCGAAAGCTAT
CATCACCGTTCTGATGTTTTTGACATTAGAGGTGAGCTATGAGAATAACA
ATATTGTTTTTCTAAATAGCTCTTTATATTAAGGCTGTTGAAAATTAGAG
AAACCCCATCAATTCAAGGTCAATTTGAAGACATCCAGAGAATTGCAAGT
GatttgagtttcatgtatggtCCATTTCTAACGAAACAATGCAACACTGA
CCATAGTAAAAACATAATTTATTCCATCCTGTATCATTTAATGATATTAT
CCCAACTATGTTGGCTAAATCTAATAAAAGGCGGTGAGCTGAAGTTGTGA
CGTTTGAAAGTGAAATAACCATCTTCTGAGGGGATTTACTCTTCACAAAA
TATAACATAACACCTTTTCTCTGTTTACAGTCCGAGGATAAACAGAATGT
CATTCGTGCGGTCGACGACCTGTCACCAATGGACCAAAAATTTGTGATGG
AGGCTTTAACAAAGGTATACAACACTTTCTGAAATGAGGTTCAATGTTGA
TAATGCAAATTATTTCCAACCCTTACATACTGATTTCTTTGTGTTAATTC
CTCAGAAATGGGCGTTCCCAGGATAAAAACATCTCCTCTCGAGGTGGGTA
GAGTTTTAAAATGGCGGCATTGTATAAAGACAATAAAAAAGGAAGTCTAC
CGAGGCTTTTCAACCAAGTCCTGTATAACAGACGTGGTTCAACGGTGTTC
ATTAAAAAGTGAATAAAAAGTTGTAACTTTTATCTGCGTTATTTCTATAG
GTCCAAGGAGAAGAGTTGGATCTCAATCCATCGTAAGTTTCTGTATTTAT
GATAAAAAGTGAAGTACAAGCCGAAATATTCTTGTATTTTAATTATAGTT
TGATTCCGCTCTGCCAATAGTATTGAGCACCTCTGTCGAATTTATAAAGT
CAGACGTACAACAAAATATGTTTACATGATACATGCATGCAACTTGGTAT
GGTATGCTGCTATACGTGACAtagattttttttgttatataGATGCCCGA
CTTTCAAGGCTCTTGAAGAGGCTTTAAAGAAAAACGATGACTATTTGGAG
GTGAGATACTATTTTTAtggtaatcgtcagccgtgcaaaattactcgaat
ctgattggtttagaggagtgcaattaatcgttaattgcactattaccact
ttttgcactcttcggc Run BLAST on NCBI transcript from alignment at sc0001590:14714..16179 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037216 ID=TCONS_00037216|Name=TCONS_00037216|organism=Clytia hemisphaerica|type=transcript|length=1466bp|location=Sequence derived from alignment at sc0001590:14714..16179 (Clytia hemisphaerica)
gccgaagagtgcaaaaagtggtaatagtgcaattaacgattaattgcact
cctctaaaccaatcagattcgagtaattttgcacggctgacgattaccaT
AAAAATAGTATCTCACCTCCAAATAGTCATCGTTTTTCTTTAAAGCCTCT
TCAAGAGCCTTGAAAGTCGGGCATCtatataacaaaaaaaatctaTGTCA
CGTATAGCAGCATACCATACCAAGTTGCATGCATGTATCATGTAAACATA
TTTTGTTGTACGTCTGACTTTATAAATTCGACAGAGGTGCTCAATACTAT
TGGCAGAGCGGAATCAAACTATAATTAAAATACAAGAATATTTCGGCTTG
TACTTCACTTTTTATCATAAATACAGAAACTTACGATGGATTGAGATCCA
ACTCTTCTCCTTGGACCTATAGAAATAACGCAGATAAAAGTTACAACTTT
TTATTCACTTTTTAATGAACACCGTTGAACCACGTCTGTTATACAGGACT
TGGTTGAAAAGCCTCGGTAGACTTCCTTTTTTATTGTCTTTATACAATGC
CGCCATTTTAAAACTCTACCCACCTCGAGAGGAGATGTTTTTATCCTGGG
AACGCCCATTTCTGAGGAATTAACACAAAGAAATCAGTATGTAAGGGTTG
GAAATAATTTGCATTATCAACATTGAACCTCATTTCAGAAAGTGTTGTAT
ACCTTTGTTAAAGCCTCCATCACAAATTTTTGGTCCATTGGTGACAGGTC
GTCGACCGCACGAATGACATTCTGTTTATCCTCGGACTGTAAACAGAGAA
AAGGTGTTATGTTATATTTTGTGAAGAGTAAATCCCCTCAGAAGATGGTT
ATTTCACTTTCAAACGTCACAACTTCAGCTCACCGCCTTTTATTAGATTT
AGCCAACATAGTTGGGATAATATCATTAAATGATACAGGATGGAATAAAT
TATGTTTTTACTATGGTCAGTGTTGCATTGTTTCGTTAGAAATGGaccat
acatgaaactcaaatCACTTGCAATTCTCTGGATGTCTTCAAATTGACCT
TGAATTGATGGGGTTTCTCTAATTTTCAACAGCCTTAATATAAAGAGCTA
TTTAGAAAAACAATATTGTTATTCTCATAGCTCACCTCTAATGTCAAAAA
CATCAGAACGGTGATGATAGCTTTCGCCTCTTCGTAACATGAATCTAAAA
TGGAAAGACGATGTGGAAATTTCCATAACACTGTCTGTACCACTAATAAA
TGTAAGTGCAGTCAGTCCTACATGTAGTTTTTTGATTGGACGtccactga
aattttttaattgcgTTTGCAACCAGGAAACTTTTCAAATAGACAGTCTA
AGAATATATCAACATTGCTAAATCGAATTCAATGCTTGTCTCGgcttggt
tttgatttttttttgcaaagcatCATTAAATGATGGCGTCTAAACTTtgg
gtcaaattttcaatta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037216-exon-sc0001590-1491911889:14714..16179 | TCONS_00037216-exon-sc0001590-1491911889:14714..16179 | Clytia hemisphaerica | exon |
| TCONS_00037216-exon-sc0001590-1510915933:14714..16179 | TCONS_00037216-exon-sc0001590-1510915933:14714..16179 | Clytia hemisphaerica | exon |
| TCONS_00037216-exon-sc0001590-1575043694:14714..16179 | TCONS_00037216-exon-sc0001590-1575043694:14714..16179 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001590 | supercontig | sc0001590:14714..16179 . |
Blast
The following BLAST results are available for this feature:
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