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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037212 ID=TCONS_00037212|Name=TCONS_00037212|organism=Clytia hemisphaerica|type=transcript|length=2053bp
tttgcaatGCGCTTGAAGAAGTAGTTGACAAGATTAATAACTTGTCCGTC
ATTGACGTCGTAAGTTCTTTAAATGTaacttttaaaatgtattttttgct
tgattttaatattttaatattaCGCACAGTCAATTTTACAGTTTATCTTT
AATGTGATTACAATTGGTGTAAGATTATGCATTCAGTAATTTAAGTAGTT
CTTACACAAAGCATTCACTGGCAACATTATAATGATTTGTCATGAAACAA
ATTTGAAACCGGGAGAATTTCTTATTTCTTTCGTTTCGGGCCACGCCTGA
TCCCGTTTTCAattctgtaacttttgatacttGTAACCACTCAAGTTCAA
CTGGATAGGAAATGCTGCTTTTATAGAACgttttattttctcattggctt
acattttcgtgattttgaaaaatttaaatgttgATTGAAACTGAGGGAGT
TATTTATGCTTTGGGTGGCAGTCAGCAAGAAGTACTACACATTTGAGCTA
ATTGATCTTTTTTAAGAAGGAttaatttaaacttttaaaagaaaaatttt
attgtaTTTTCTCATCCTAGGAAACAAAGATCATCGATTTCCAGATAGAG
GAGCCACCTTCGATCCAAAATATGGAAGTTGACGAAAATGttagcatttt
ttcataatGTCTCTCATAACTTCGCTTGTCCCCTCTATACCTACCATCAA
ATTTAGGGTAGCGGGCGACTTACGAGGGTTATTACTATAAATcacatttc
attttcttttatatAATTCATTTTTTCTCCAGATAGCAATAACTCCGaag
ccaaaaaaaatgaaaacaacaagACAAAAGCGACAACTTCTTGATGACGT
ATGCAAAAACAGTTGAAATTCATGCAAGCACTAGAAGTGTAAAGAGTGAA
AATTCTTGCTGAAAAATGACTTCAACCGATATGAtcgatttgaaaaataa
gaatagaaGGTCGAAAAAAAGTCAGACAACCGTTGAAGGGCATTTACGTT
TGATCTTTACCTGAGATTTATTCATTTTGCACGTTTCTGTTTCATGACTT
CAACTGCATATGTGGAAAGTGTTACTTAAAAAGCTAAATAGGCATATAAA
GCTccgaaaaacaaaaaagtagCCAAACCAAAAACGAAAGAGCCGGtaag
tttcaaaaagtttcaaataattttttttacagatgGATTAGATTTTTACT
GCTACACTCGGTGTTAACTCTACGACTTATATTGATTTATTTACACATGA
AATTAGTAATTCCTATTTCTGTTTGTATTACAATATGAAAAGCTTGAATA
GACACACAAAGCTGCGGAAAACTGAAAATAGCCCAACTAAACACGAAAGA
TCCAGTAAAGTCATCTTTTACAAATGGTTACGATTATTACTGATTATTAC
AGCTCTCCTCCTTTACACTGTtgtaatactttttttattgttttggaaTG
ATTCTATAGCATTCTTAGGATCTTTGATCAAAAATGTTAATTTATTCATT
GAATTAATTGATTTATTTTGCACGTGAAATTATCGAATCCTATTTTTGTT
TCAGGACTTCAACTGCATATGTGGAAAGTGTTATTTCCAATCGAAAATGC
TGAACAGACAtataaaaatacgaaaatcaaaaatagccCAACGAAACACG
AAAGAACCGGTAagtcattttttacaaatgatTACGATTATTTCAGCTCT
CCATCTTcatttaactttttaaatatctcaacaaaataggccttttcata
aattacgtcacgaatatcacttgcctcgtattcatataattcaatgattt
ttttatgaatagaaagtagttttaataaaccCGCTGGGATTTAAAACACC
ATGGCagtaatttcaaaacgaggcaagcgaggttcgtaacgtaatttata
aaaaggtctatCAAACTTTCCAACGAAACCAACTACATCatgtttagtga
cgtggtgaAGAAACTTTTTGTACCACATGGTACCAATATACCAAAAATGT
GGTACCCAGactaaaattctaaattttttttcatgattttcagtACATGT
tcc Run BLAST on NCBI transcript from alignment at sc0001590:8517..10569 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037212 ID=TCONS_00037212|Name=TCONS_00037212|organism=Clytia hemisphaerica|type=transcript|length=2053bp|location=Sequence derived from alignment at sc0001590:8517..10569 (Clytia hemisphaerica)
ggaACATGTactgaaaatcatgaaaaaaaatttagaattttagtCTGGGT
ACCACATTTTTGGTATATTGGTACCATGTGGTACAAAAAGTTTCTtcacc
acgtcactaaacatGATGTAGTTGGTTTCGTTGGAAAGTTTGatagacct
ttttataaattacgttacgaacctcgcttgcctcgttttgaaattactGC
CATGGTGTTTTAAATCCCAGCGggtttattaaaactactttctattcata
aaaaaatcattgaattatatgaatacgaggcaagtgatattcgtgacgta
atttatgaaaaggcctattttgttgagatatttaaaaagttaaatgAAGA
TGGAGAGCTGAAATAATCGTAatcatttgtaaaaaatgactTACCGGTTC
TTTCGTGTTTCGTTGggctatttttgattttcgtatttttataTGTCTGT
TCAGCATTTTCGATTGGAAATAACACTTTCCACATATGCAGTTGAAGTCC
TGAAACAAAAATAGGATTCGATAATTTCACGTGCAAAATAAATCAATTAA
TTCAATGAATAAATTAACATTTTTGATCAAAGATCCTAAGAATGCTATAG
AATCAttccaaaacaataaaaaaagtattacaACAGTGTAAAGGAGGAGA
GCTGTAATAATCAGTAATAATCGTAACCATTTGTAAAAGATGACTTTACT
GGATCTTTCGTGTTTAGTTGGGCTATTTTCAGTTTTCCGCAGCTTTGTGT
GTCTATTCAAGCTTTTCATATTGTAATACAAACAGAAATAGGAATTACTA
ATTTCATGTGTAAATAAATCAATATAAGTCGTAGAGTTAACACCGAGTGT
AGCAGTAAAAATCTAATCcatctgtaaaaaaaattatttgaaactttttg
aaacttaCCGGCTCTTTCGTTTTTGGTTTGGctacttttttgtttttcgg
AGCTTTATATGCCTATTTAGCTTTTTAAGTAACACTTTCCACATATGCAG
TTGAAGTCATGAAACAGAAACGTGCAAAATGAATAAATCTCAGGTAAAGA
TCAAACGTAAATGCCCTTCAACGGTTGTCTGACTTTTTTTCGACCttcta
ttcttatttttcaaatcgaTCATATCGGTTGAAGTCATTTTTCAGCAAGA
ATTTTCACTCTTTACACTTCTAGTGCTTGCATGAATTTCAACTGTTTTTG
CATACGTCATCAAGAAGTTGTCGCTTTTGTcttgttgttttcattttttt
tggcttCGGAGTTATTGCTATCTGGAGAAAAAATGAATTatataaaagaa
aatgaaatgtgATTTATAGTAATAACCCTCGTAAGTCGCCCGCTACCCTA
AATTTGATGGTAGGTATAGAGGGGACAAGCGAAGTTATGAGAGACattat
gaaaaaatgctaaCATTTTCGTCAACTTCCATATTTTGGATCGAAGGTGG
CTCCTCTATCTGGAAATCGATGATCTTTGTTTCCTAGGATGAGAAAAtac
aataaaatttttcttttaaaagtttaaattaaTCCTTCTTAAAAAAGATC
AATTAGCTCAAATGTGTAGTACTTCTTGCTGACTGCCACCCAAAGCATAA
ATAACTCCCTCAGTTTCAATcaacatttaaatttttcaaaatcacgaaaa
tgtaagccaatgagaaaataaaacGTTCTATAAAAGCAGCATTTCCTATC
CAGTTGAACTTGAGTGGTTACaagtatcaaaagttacagaatTGAAAACG
GGATCAGGCGTGGCCCGAAACGAAAGAAATAAGAAATTCTCCCGGTTTCA
AATTTGTTTCATGACAAATCATTATAATGTTGCCAGTGAATGCTTTGTGT
AAGAACTACTTAAATTACTGAATGCATAATCTTACACCAATTGTAATCAC
ATTAAAGATAAACTGTAAAATTGACTGTGCGtaatattaaaatattaaaa
tcaagcaaaaaatacattttaaaagttACATTTAAAGAACTTACGACGTC
AATGACGGACAAGTTATTAATCTTGTCAACTACTTCTTCAAGCGCattgc
aaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037212-exon-sc0001590-1491911889:8517..10569 | TCONS_00037212-exon-sc0001590-1491911889:8517..10569 | Clytia hemisphaerica | exon |
| TCONS_00037212-exon-sc0001590-1510915933:8517..10569 | TCONS_00037212-exon-sc0001590-1510915933:8517..10569 | Clytia hemisphaerica | exon |
| TCONS_00037212-exon-sc0001590-1575043694:8517..10569 | TCONS_00037212-exon-sc0001590-1575043694:8517..10569 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001590 | supercontig | sc0001590:8517..10569 . |
Blast
The following BLAST results are available for this feature:
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