TCONS_00037200 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037200
Unique NameTCONS_00037200
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037200 ID=TCONS_00037200|Name=TCONS_00037200|organism=Clytia hemisphaerica|type=transcript|length=141bp
TTCCACACCTGGCTTGCtaaagaggaaagaaaaaagGAGACTGTACCTGG
CTATTCAAACTGTTGAAGGGCTGCAAACTACAGTCAAGACATTCACTTCA
TTGATGCAAGAGCTGCTTGTCGAATATCCTGGATTTTACNN
Run BLAST on NCBI

transcript from alignment at sc0001590:64072..64401+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037200 ID=TCONS_00037200|Name=TCONS_00037200|organism=Clytia hemisphaerica|type=transcript|length=330bp|location=Sequence derived from alignment at sc0001590:64072..64401+ (Clytia hemisphaerica)
TTCCACACCTGGCTTGCtaaagaggaaagaaaaaagGAGACTGTACCTGG
CTATTCAAACTGTTGAAGGGCTGCAAACTACAGGTTTGTAATGATTTtgc
cttcaatttttttttagtttgaaatagtacaatgttaatttttaagcAAT
CAATGTTTCTGTGAGTGCTCCTGGCTTTGCATGTTctggagttttttttt
tcaaaatagaaaaccaACACTTTCTCCatcttttattctttcattcagac
ttttttcacttttcatctttAGTCAAGACATTCACTTCATTGATGCAAGA
GCTGCTTGTCGAATATCCTGGATTTTACNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_022008XLOC_022008Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037200-exon-sc0001590-1491911889:64072..64154TCONS_00037200-exon-sc0001590-1491911889:64072..64154Clytia hemisphaericaexon
TCONS_00037200-exon-sc0001590-1510915933:64072..64154TCONS_00037200-exon-sc0001590-1510915933:64072..64154Clytia hemisphaericaexon
TCONS_00037200-exon-sc0001590-1575043694:64072..64154TCONS_00037200-exon-sc0001590-1575043694:64072..64154Clytia hemisphaericaexon
TCONS_00037200-exon-sc0001590-1491911889:64344..64401TCONS_00037200-exon-sc0001590-1491911889:64344..64401Clytia hemisphaericaexon
TCONS_00037200-exon-sc0001590-1510915933:64344..64401TCONS_00037200-exon-sc0001590-1510915933:64344..64401Clytia hemisphaericaexon
TCONS_00037200-exon-sc0001590-1575043694:64344..64401TCONS_00037200-exon-sc0001590-1575043694:64344..64401Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001590supercontigsc0001590:64072..64401 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037200 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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