TCONS_00037153 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037153
Unique NameTCONS_00037153
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length773

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037153 ID=TCONS_00037153|Name=TCONS_00037153|organism=Clytia hemisphaerica|type=transcript|length=773bp
GCAGACTACATTTTTTACATTAAttttatttattcaaatttttgtaatta
CTTAATATCTGTAAAGAGCAATTAAAGTCATCCAAGACACAAAAATTTGG
CCAGCCTTTGGGTGCAGGTGGGTTTGGCATGTTGTTGGACAGAATTATGC
TCATTTTGACAGCTTTCAGTCTGAGGAGATTGCTATCAAACTTCaacata
aaaacattttaaagaccTCACGTACATTTTTACATAATCATATTCCCATT
ATATTTTGATGGAATATTGGAATGCAAAAACATTGCAATCTGTTCTTAac
gaaaataatgaaaaaaagacATCAGGCCCATGTAAAATAAGGAACTTTGG
ATCCTATAAAAACTTAACCGATATGTCTTCTCCAACAACCTCACTAGAAA
TAAACTTGACAGGCACATATCCATACTGTGCACCAGAAAAGTTCTGTGGT
GAATCTGCTACATTTAAAGCTGACATGTATTTGCTCAGTATATGTCTATG
ACAAATTGCAACATGCTAAAAACCTTATACTAACACACATAATGAAGTTA
TCATCTTTAATCTTGTCACTCATAACTTGAGACCACACATTATACCCGAT
AACATAGAAGAACTCTATTCACAGTTGATCATCCAGTGTATGGACAATTG
TAAAGAAAAACGAATGGATGCATATGCAATTCTTTCTAGAACATTTTTAA
TTACATTTTTAACTAGTGAAACATTACATgcatatatttttatatatagG
TTAGTTTtatatttagaaacaaa
Run BLAST on NCBI

transcript from alignment at sc0001581:57651..58423

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037153 ID=TCONS_00037153|Name=TCONS_00037153|organism=Clytia hemisphaerica|type=transcript|length=773bp|location=Sequence derived from alignment at sc0001581:57651..58423 (Clytia hemisphaerica)
tttgtttctaaatataAAACTAACctatatataaaaatatatgcATGTAA TGTTTCACTAGTTAAAAATGTAATTAAAAATGTTCTAGAAAGAATTGCAT ATGCATCCATTCGTTTTTCTTTACAATTGTCCATACACTGGATGATCAAC TGTGAATAGAGTTCTTCTATGTTATCGGGTATAATGTGTGGTCTCAAGTT ATGAGTGACAAGATTAAAGATGATAACTTCATTATGTGTGTTAGTATAAG GTTTTTAGCATGTTGCAATTTGTCATAGACATATACTGAGCAAATACATG TCAGCTTTAAATGTAGCAGATTCACCACAGAACTTTTCTGGTGCACAGTA TGGATATGTGCCTGTCAAGTTTATTTCTAGTGAGGTTGTTGGAGAAGACA TATCGGTTAAGTTTTTATAGGATCCAAAGTTCCTTATTTTACATGGGCCT GATgtctttttttcattattttcgtTAAGAACAGATTGCAATGTTTTTGC ATTCCAATATTCCATCAAAATATAATGGGAATATGATTATGTAAAAATGT ACGTGAggtctttaaaatgtttttatgttGAAGTTTGATAGCAATCTCCT CAGACTGAAAGCTGTCAAAATGAGCATAATTCTGTCCAACAACATGCCAA ACCCACCTGCACCCAAAGGCTGGCCAAATTTTTGTGTCTTGGATGACTTT AATTGCTCTTTACAGATATTAAGtaattacaaaaatttgaataaataaaa TTAATGTAAAAAATGTAGTCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021976XLOC_021976Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037153-exon-sc0001581-1491911889:57651..58423TCONS_00037153-exon-sc0001581-1491911889:57651..58423Clytia hemisphaericaexon
TCONS_00037153-exon-sc0001581-1510915933:57651..58423TCONS_00037153-exon-sc0001581-1510915933:57651..58423Clytia hemisphaericaexon
TCONS_00037153-exon-sc0001581-1575043694:57651..58423TCONS_00037153-exon-sc0001581-1575043694:57651..58423Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001581supercontigsc0001581:57651..58423 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037153 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top