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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037132 ID=TCONS_00037132|Name=TCONS_00037132|organism=Clytia hemisphaerica|type=transcript|length=1581bp
tataattttttttaacaagacaacaatgaaatttgaaaaaaaagagttga
CAGTGACATTAAACAACCCAAAAAAAGCTGGAACAGAAGAAATATATAGC
ATTGATTTAATaggaagaaaattagttttcgtAAGAATTTACGAAAAGTG
CCTTGTTAATAAAATTATTGAACTTTACTATTTTGACTTTGACGAAATCG
TCGATTtgaaattcgagaaaaagatGGTTGAAATCGATACTGAGCCTATA
ACTATGGATTACAAGAAAGCAGAGTTCGGTGGTTCTATTTGTAAGTTTGG
CATcaacaatgaaaaattttttgtaatGGTTTATAAACGGTTTGAGGATA
ATACCAAATCAGAAAACTACAAATGCGCAATTGATgttgttgaaaacaaa
aaacgtatTTTCATCAACCTTCCGTCTCTTCCATATTTTTATGACAGCTT
TTTTATGGATAACCGATGCTTCTTTTTGAGTTATTCAACCAATAAAATTC
TAGAGTTTAATTATGATGGTCAGTTGGTTCAcgtttataaatataaaaag
gaAATTCATCCCGGCTCCATGTACTGTATTGTGCCGATTAACAAATCAAT
GTTTTTAAGACCATTTGTTTTTGATAATGGATACATGGATCCCGTCCATG
TTTCTCTTTTGGAAAATGGGAAAGTTTATAacattgattttcaaaataag
gaAGTTGTACAGTTACCAGAGGATGTCAAAGAAGTAGACGTGTGTGGTTT
ATCAAAAGCATTTGGTATGATGACCctcaattttaatttgcaaaCTTTTG
AGGGAAGAAAGCTTATAATGATCGATTCAAACTCCGAAATTACATTCCAA
ATGTTTGAGAAAGACTGCTTGACTGAGAAATATATCAATTGGAGCATGGA
GGAGATAGCAACAAccctttttcataaaaaactatGTACCAAGCCATACA
GAGGGCGAATAGGTGAATCAATTTTCAGTGACCTTGAATTCAATGTAGTG
AAAACAAACATTTCTAAAAGGTTTTTGTCATTGAAACGTTTATCAGCAAC
GGCTGTTTTAACAAACTTCAGTGATGAGTACATTCTGAAACAAAATTTAC
CCAAATGTTTGTTTGGCTTTCTAGGGTTttcatagctgtcaactctcccg
catcgagcgggagactcccgcatgtcaacgatttctcccgcgtgaagaaa
attctgccgaatctcccgcatttttgggattttctcccgcatctcccgca
tttccaaaaattttctgattttggaaaaaccaaacggCGAAATTTCTGGA
TTTTGAAAGATCGGAACGAAAAATTCCCCAATTTTTGAAAAAAGTTTCCA
ATAAAATCGGATTTTAcgagaaaatttccccgatttcccgattttccgat
tttgaaaaatcggattatcggggaaaatttttccgacatggagctctccc
gcatttttgtgaggcgaagttgacagctatgggTTTTAGATTAGTTAATT
TTATTGTATAATACCCTACAATTAAATCGTGTTTTTTATCAATTGTTGTG
TTTAGGGAGGCttgtttgattttaaaatttt Run BLAST on NCBI protein sequence of TCONS_00037132-protein >TCONS_00037132-protein ID=TCONS_00037132-protein|Name=TCONS_00037132-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
IIFFNKTTMKFEKKELTVTLNNPKKAGTEEIYSIDLIGRKLVFVRIYEKC
LVNKIIELYYFDFDEIVDLKFEKKMVEIDTEPITMDYKKAEFGGSICKFG
INNEKFFVMVYKRFEDNTKSENYKCAIDVVENKKRIFINLPSLPYFYDSF
FMDNRCFFLSYSTNKILEFNYDGQLVHVYKYKKEIHPGSMYCIVPINKSM
FLRPFVFDNGYMDPVHVSLLENGKVYNIDFQNKEVVQLPEDVKEVDVCGL
SKAFGMMTLNFNLQTFEGRKLIMIDSNSEITFQMFEKDCLTEKYINWSME
EIATTLFHKKLCTKPYRGRIGESIFSDLEFNVVKTNISKRFLSLKRLSAT
AVLTNFSDEYILKQNLPKCLFGFLGFS Run BLAST on NCBI transcript from alignment at sc0001576:36065..37645 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037132 ID=TCONS_00037132|Name=TCONS_00037132|organism=Clytia hemisphaerica|type=transcript|length=1581bp|location=Sequence derived from alignment at sc0001576:36065..37645 (Clytia hemisphaerica)
aaaattttaaaatcaaacaaGCCTCCCTAAACACAACAATTGATAAAAAA
CACGATTTAATTGTAGGGTATTATACAATAAAATTAACTAATCTAAAAcc
catagctgtcaacttcgcctcacaaaaatgcgggagagctccatgtcgga
aaaattttccccgataatccgatttttcaaaatcggaaaatcgggaaatc
ggggaaattttctcgTAAAATCCGATTTTATTGGAAACTTTTTTCAAAAA
TTGGGGAATTTTTCGTTCCGATCTTTCAAAATCCAGAAATTTCGccgttt
ggtttttccaaaatcagaaaatttttggaaatgcgggagatgcgggagaa
aatcccaaaaatgcgggagattcggcagaattttcttcacgcgggagaaa
tcgttgacatgcgggagtctcccgctcgatgcgggagagttgacagctat
gaaAACCCTAGAAAGCCAAACAAACATTTGGGTAAATTTTGTTTCAGAAT
GTACTCATCACTGAAGTTTGTTAAAACAGCCGTTGCTGATAAACGTTTCA
ATGACAAAAACCTTTTAGAAATGTTTGTTTTCACTACATTGAATTCAAGG
TCACTGAAAATTGATTCACCTATTCGCCCTCTGTATGGCTTGGTACatag
ttttttatgaaaaagggTTGTTGCTATCTCCTCCATGCTCCAATTGATAT
ATTTCTCAGTCAAGCAGTCTTTCTCAAACATTTGGAATGTAATTTCGGAG
TTTGAATCGATCATTATAAGCTTTCTTCCCTCAAAAGtttgcaaattaaa
attgagGGTCATCATACCAAATGCTTTTGATAAACCACACACGTCTACTT
CTTTGACATCCTCTGGTAACTGTACAACTtccttattttgaaaatcaatg
tTATAAACTTTCCCATTTTCCAAAAGAGAAACATGGACGGGATCCATGTA
TCCATTATCAAAAACAAATGGTCTTAAAAACATTGATTTGTTAATCGGCA
CAATACAGTACATGGAGCCGGGATGAATTtcctttttatatttataaacg
TGAACCAACTGACCATCATAATTAAACTCTAGAATTTTATTGGTTGAATA
ACTCAAAAAGAAGCATCGGTTATCCATAAAAAAGCTGTCATAAAAATATG
GAAGAGACGGAAGGTTGATGAAAatacgttttttgttttcaacaacATCA
ATTGCGCATTTGTAGTTTTCTGATTTGGTATTATCCTCAAACCGTTTATA
AACCattacaaaaaatttttcattgttgATGCCAAACTTACAAATAGAAC
CACCGAACTCTGCTTTCTTGTAATCCATAGTTATAGGCTCAGTATCGATT
TCAACCatctttttctcgaatttcaAATCGACGATTTCGTCAAAGTCAAA
ATAGTAAAGTTCAATAATTTTATTAACAAGGCACTTTTCGTAAATTCTTa
cgaaaactaattttcttcctATTAAATCAATGCTATATATTTCTTCTGTT
CCAGCTTTTTTTGGGTTGTTTAATGTCACTGtcaactcttttttttcaaa
tttcattgttgtcttgttaaaaaaaattata Coding sequence (CDS) from alignment at sc0001576:36065..37645 >TCONS_00037132 ID=TCONS_00037132|Name=TCONS_00037132|organism=Clytia hemisphaerica|type=CDS|length=1134bp|location=Sequence derived from alignment at sc0001576:36065..37645 (Clytia hemisphaerica)
ctatgaaAACCCTAGAAAGCCAAACAAACATTTGGGTAAATTTTGTTTCA
GAATGTACTCATCACTGAAGTTTGTTAAAACAGCCGTTGCTGATAAACGT
TTCAATGACAAAAACCTTTTAGAAATGTTTGTTTTCACTACATTGAATTC
AAGGTCACTGAAAATTGATTCACCTATTCGCCCTCTGTATGGCTTGGTAC
atagttttttatgaaaaagggTTGTTGCTATCTCCTCCATGCTCCAATTG
ATATATTTCTCAGTCAAGCAGTCTTTCTCAAACATTTGGAATGTAATTTC
GGAGTTTGAATCGATCATTATAAGCTTTCTTCCCTCAAAAGtttgcaaat
taaaattgagGGTCATCATACCAAATGCTTTTGATAAACCACACACGTCT
ACTTCTTTGACATCCTCTGGTAACTGTACAACTtccttattttgaaaatc
aatgtTATAAACTTTCCCATTTTCCAAAAGAGAAACATGGACGGGATCCA
TGTATCCATTATCAAAAACAAATGGTCTTAAAAACATTGATTTGTTAATC
GGCACAATACAGTACATGGAGCCGGGATGAATTtcctttttatatttata
aacgTGAACCAACTGACCATCATAATTAAACTCTAGAATTTTATTGGTTG
AATAACTCAAAAAGAAGCATCGGTTATCCATAAAAAAGCTGTCATAAAAA
TATGGAAGAGACGGAAGGTTGATGAAAatacgttttttgttttcaacaac
ATCAATTGCGCATTTGTAGTTTTCTGATTTGGTATTATCCTCAAACCGTT
TATAAACCattacaaaaaatttttcattgttgATGCCAAACTTACAAATA
GAACCACCGAACTCTGCTTTCTTGTAATCCATAGTTATAGGCTCAGTATC
GATTTCAACCatctttttctcgaatttcaAATCGACGATTTCGTCAAAGT
CAAAATAGTAAAGTTCAATAATTTTATTAACAAGGCACTTTTCGTAAATT
CTTacgaaaactaattttcttcctATTAAATCAATGCTATATATTTCTTC
TGTTCCAGCTTTTTTTGGGTTGTTTAATGTCACTGtcaactctttttttt
caaatttcattgttgtcttgttaaaaaaaattat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037132-exon-sc0001576-1491911889:36065..37645 | TCONS_00037132-exon-sc0001576-1491911889:36065..37645 | Clytia hemisphaerica | exon |
| TCONS_00037132-exon-sc0001576-1510915933:36065..37645 | TCONS_00037132-exon-sc0001576-1510915933:36065..37645 | Clytia hemisphaerica | exon |
| TCONS_00037132-exon-sc0001576-1575043694:36065..37645 | TCONS_00037132-exon-sc0001576-1575043694:36065..37645 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001576 | supercontig | sc0001576:36065..37645 . |
Blast
The following BLAST results are available for this feature:
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