TCONS_00037124 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037124
Unique NameTCONS_00037124
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length363

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037124 ID=TCONS_00037124|Name=TCONS_00037124|organism=Clytia hemisphaerica|type=transcript|length=363bp
tttcgaTGTCAGTATAAAAACATCTCCAAGATGTAATGCGAAAGTACGTG
TCATGTCAAATAAAGATGATTATTCCCATGAAAAGTTCAACGAACATTAC
AAGGCACGCTCTCCATTGCGTTTTAACAATTTGTCACCAATGAAAAGTGG
TAAACGTTTTCTCAATCCTTCTTTTGGTGGCAATGTTACAACGACTTCTG
CAGAAGAAAtgagttctcaacttcagttgagctataatctgagaatgtct
gtatgtatgtctgtatgtccgtccgtccgaaaactttagggcaggctgga
cacttcaaaaaaggtcggatttggctgaaatttggcacacttgttccttg
ggtgaatatctgg
Run BLAST on NCBI

transcript from alignment at sc0001573:46658..47020

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037124 ID=TCONS_00037124|Name=TCONS_00037124|organism=Clytia hemisphaerica|type=transcript|length=363bp|location=Sequence derived from alignment at sc0001573:46658..47020 (Clytia hemisphaerica)
ccagatattcacccaaggaacaagtgtgccaaatttcagccaaatccgac
cttttttgaagtgtccagcctgccctaaagttttcggacggacggacata
cagacatacatacagacattctcagattatagctcaactgaagttgagaa
ctcaTTTCTTCTGCAGAAGTCGTTGTAACATTGCCACCAAAAGAAGGATT
GAGAAAACGTTTACCACTTTTCATTGGTGACAAATTGTTAAAACGCAATG
GAGAGCGTGCCTTGTAATGTTCGTTGAACTTTTCATGGGAATAATCATCT
TTATTTGACATGACACGTACTTTCGCATTACATCTTGGAGATGTTTTTAT
ACTGACAtcgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021956XLOC_021956Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037124-exon-sc0001573-1491911889:46658..47020TCONS_00037124-exon-sc0001573-1491911889:46658..47020Clytia hemisphaericaexon
TCONS_00037124-exon-sc0001573-1510915933:46658..47020TCONS_00037124-exon-sc0001573-1510915933:46658..47020Clytia hemisphaericaexon
TCONS_00037124-exon-sc0001573-1575043694:46658..47020TCONS_00037124-exon-sc0001573-1575043694:46658..47020Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001573supercontigsc0001573:46658..47020 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.8561	9.42218	28.0881	38.5625	21.7452	16.0585	24.0316	34.0032	8.32606	5.85282	6.3781	3.95993	5.40112	9.74593	5.01509	9.33097	7.75887	6.82413	4.85545	7.46672	16.7852	20.4155	6.69856	10.0514	9.56816	8.78553	36.6713	37.3097	29.3937	22.5945
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037124 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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