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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037118 ID=TCONS_00037118|Name=TCONS_00037118|organism=Clytia hemisphaerica|type=transcript|length=517bp
GAAAACTGGAGCAAAAAGTGTAGTTTGGTTTACTAAAACCACTACAACGA
CCACGACAACAACGACGACAATAAAACCAGGGATCCTAACAACTTCAGTG
CCAAGTGCAACTAAAGATGAAAAAGGGTTATGGCTTGGAATAGGCATTGT
CATCGGGTTGGTTATTGGGCTATTACTAGCTCTGGTAATCTTTCATATTT
TGCGTTTTTACCAGAGACAAAACAATACCAAAGGAAATCAACCCAATGAA
CTGACGGAGAAAGGACCAACTTATGAAGGTGTCAACGACAATGTTTTTGT
GAATACAGAGTCGCCTAATGAACAGgATTATGAGTTTGTTGCAGATCATG
GGAATTCAAAGAGAGCGAACGCTGCAACCTATCAAGAACTCAATGCTATA
TCACCGCCAGATTTGACTTACACCAAACTTCAAGGAAAATCACATTACGA
AATATAATAGAAATATCAAGAGAAAATTACATCCTTTTTTTAGGCTTTAC
ATAGCTTTACGGTCGAA Run BLAST on NCBI transcript from alignment at sc0001573:33172..35416- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037118 ID=TCONS_00037118|Name=TCONS_00037118|organism=Clytia hemisphaerica|type=transcript|length=2245bp|location=Sequence derived from alignment at sc0001573:33172..35416- (Clytia hemisphaerica)
GAAAACTGGAGCAAAAAGTGTAGTTTGGTTTACTAAAACCACTACAACGA
CCACGACAACAACGACGACAATAAAACCAGGGATCCTAACAACTTCAGTG
CCAAGTGCAACTAGTATGTATACTGTGTGTCCTTGAGATAAACATCGAAA
AGAGAAAAATAATTAAAGACAAAGAAATCGAAAACTGGTTAAATGGAAAA
TTTGCAAATTATTATGATGAGTTTTATAGTCGGGGAGAGGCTAAAACTGC
AATGTTTTTTCTTTGTACACATTTTTTTTAATGATGATACAGGAAAATTA
AAACCATTTTCAAAATCTTCTGTTTTTCTAGAAGATGAAAAAGGGTTATG
GCTTGGAATAGGCATTGTCATCGGGTTGGTTATTGGGCTATTACTAGCTC
TGGTAATCTTTCATATTTTGCGTTTTTACCAGAGACAAAACAATACCAAA
GGTAAGCAAGAATTTATGACAAATTTGTAGTTTCAAGCATAATATACTTA
TTTTCAATGAACACGAGCCCAAACTCCAACCTTACTACACATCGGTATTA
TATCTGTCAATATTTTTAACTTTGACGTTTGCTGTTCATCTAGGAAATCA
ACCCAATGAACTGACGGAGAAAGGACCAACTTATGAAGGTGTCAACGACA
ATGTTTTTGTGAATACAGAGTCGCCTAATGAACAGGTACACATTGATTGT
ATATCTCAATAGTTGAATAAATATTCCAATGGGAGCTCTTTTATCTAAAA
TGAAAATATTGATATTCGTTTGTCATGAGCTGCAACATTTGCTCGTCTAT
AAGCTTTTTGCTCTGTAAAGATTGGCAAGACAAAGACAGTTTACGTATTA
GTGAGGGATGTTGCTTGTAGAACCATGAGCTCCATTTTCACCAAAGATAT
CCAGTAAAGAATCTATTATTCAGAACCGCTAGGCTTTAACTCCTATCACT
TCTTTTCCTGGATTGCCTCACTTAAGGCATGGGGACATGAGAAGTTTTTT
TTGCGTTGGTGCAATGCAACATGCTCCATCCCACCAACCTGAAACGCTTT
TTAATGTCGCTACATAGTACCGTGAAAAGCACAGGTCAAAATCATGTATT
GACACTGAGTCGACGAATCAATATTCTATTCATCGCGCAATCAACGAAGA
CAAAGCAACCATGACGACCATCCGAGATCTTGGATGAAGTTCAAAGTTGA
TATTTTTATTCCCGTCGTTGAAAACACAACTAAAAAATATCATCAATGCT
TTTTAAAAAGATTCAGTGATAGAGAATCATGACATGAAGTCTGTCTATTT
TATAGTGAAAAATGAAAAATATCTTTTTAGTTTTCCCAGGAGTAATCTTT
AACTAAAAATATAAATATTGATCTCCCCTTAAAAAATCTAATTTTAGGTG
GCAACACGACAGAAAAACACAATTTTCCGACGTGGGATAAAATTTCTCTC
ATTAATGTCCCTGGGACAATGGAGCAAAATCGATTCAAATCAATTTACTC
CATTTTCCCAGGGACAAAATCAGTGTCTTTTGGGTATTTCTCTTAAATTT
TGTCCCATGGACAAAAATTGAAACCATGGGACACGCACTTTTTTCTTATG
TTTGTGGGATGGAGCATGTTGCATTGTACCAACGCGAAAAAAACTTCTCG
TGTTCCCAAGCCTTTATCCTTAGTCCTTCCTTTTTATTACTAAGCATTGC
GCAAACAACCTTCAAAGTACCATTTTGTAAATAAAAGGTTTTATTTTCAC
ATAAGTGTTCTCGTTTCATATCTCGTTTCCTCTTTCTGAACAATTTTGCT
CCCCATTCGTATCAATCCAATGTGAAAAAGCTTGTGAATTAAAATTGATG
ATTATGCAAATGATATCACTCTTTAAAAACAAAACCTTTAAGTATTGGTT
CAGTATGAATCCTCTCCATCTATTGTCCTGCCCAGGCTATGAACCTTCTG
AAATAACTTTTTGACATCGGTTGATATTCAACGGTACTCTAAAGTTTGGT
CACTAAAATTTGGAAAATTTTTCTAAATAACCCTTTAATTTATCATTTTT
TAGGATTATGAGTTTGTTGCAGATCATGGGAATTCAAAGAGAGCGAACGC
TGCAACCTATCAAGAACTCAATGCTATATCACCGCCAGATTTGACTTACA
CCAAACTTCAAGGAAAATCACATTACGAAATATAATAGAAATATCAAGAG
AAAATTACATCCTTTTTTTAGGCTTTACATAGCTTTACGGTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037118-exon-sc0001573-1575043694:35304..35416 | TCONS_00037118-exon-sc0001573-1575043694:35304..35416 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1575043694:34966..35085 | TCONS_00037118-exon-sc0001573-1575043694:34966..35085 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1575043694:34732..34823 | TCONS_00037118-exon-sc0001573-1575043694:34732..34823 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1575043694:33172..33363 | TCONS_00037118-exon-sc0001573-1575043694:33172..33363 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1510915933:35304..35416 | TCONS_00037118-exon-sc0001573-1510915933:35304..35416 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1510915933:34966..35085 | TCONS_00037118-exon-sc0001573-1510915933:34966..35085 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1510915933:34732..34823 | TCONS_00037118-exon-sc0001573-1510915933:34732..34823 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1510915933:33172..33363 | TCONS_00037118-exon-sc0001573-1510915933:33172..33363 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1491911889:35304..35416 | TCONS_00037118-exon-sc0001573-1491911889:35304..35416 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1491911889:34966..35085 | TCONS_00037118-exon-sc0001573-1491911889:34966..35085 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1491911889:34732..34823 | TCONS_00037118-exon-sc0001573-1491911889:34732..34823 | Clytia hemisphaerica | exon |
| TCONS_00037118-exon-sc0001573-1491911889:33172..33363 | TCONS_00037118-exon-sc0001573-1491911889:33172..33363 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001573 | supercontig | sc0001573:33172..35416 - |
Blast
The following BLAST results are available for this feature:
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