TCONS_00037103 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037103
Unique NameTCONS_00037103
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length538

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037103 ID=TCONS_00037103|Name=TCONS_00037103|organism=Clytia hemisphaerica|type=transcript|length=538bp
TGATGAATCTTACACAACCAGTACTTTACTTCTTCCTGGTTACAAGACAC
CTCTGAGGCTAGATTATACTGACACCAGTGGTGGTCTTTTAGTCTATCCA
AGATCTGACATTTTAATCCATCAGCTAACATCTTTTGTTTTTCCCAAAGG
TTTGGAGGTCATTCCCTTTGAAATCAATCTCAGGAAAACTAAGTGGTgca
tttttatgatttatagGAACCCTACTATTTATAAAACTAAGGAAAAGatt
gatcaattttttttcttctttgtcttcTGGATTAGATTTCTATAGTCAAA
CTTATGACAATTTTATGGTAGTAGGTGATTTTAACTTAGAACCCAATAAC
caagtaattaagaatttcatGGATGCACATAACCTTTATAATTTGGTCAA
ACAAAAAACCTgcttcaagtcaaaaaatggCACTTGTATTGACTTGATTC
TAACGAACAGGAAGCATTCTTTTCAATTCACTGGTGCTTTAGAAACGGGT
TCTAGTGATTATCACTTGCTAATTCATACTATGATGAA
Run BLAST on NCBI

transcript from alignment at sc0001572:28887..29424

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037103 ID=TCONS_00037103|Name=TCONS_00037103|organism=Clytia hemisphaerica|type=transcript|length=538bp|location=Sequence derived from alignment at sc0001572:28887..29424 (Clytia hemisphaerica)
TTCATCATAGTATGAATTAGCAAGTGATAATCACTAGAACCCGTTTCTAA
AGCACCAGTGAATTGAAAAGAATGCTTCCTGTTCGTTAGAATCAAGTCAA
TACAAGTGccattttttgacttgaagcAGGTTTTTTGTTTGACCAAATTA
TAAAGGTTATGTGCATCCatgaaattcttaattacttgGTTATTGGGTTC
TAAGTTAAAATCACCTACTACCATAAAATTGTCATAAGTTTGACTATAGA
AATCTAATCCAgaagacaaagaagaaaaaaaattgatcaatCTTTTCCTT
AGTTTTATAAATAGTAGGGTTCctataaatcataaaaatgcACCACTTAG
TTTTCCTGAGATTGATTTCAAAGGGAATGACCTCCAAACCTTTGGGAAAA
ACAAAAGATGTTAGCTGATGGATTAAAATGTCAGATCTTGGATAGACTAA
AAGACCACCACTGGTGTCAGTATAATCTAGCCTCAGAGGTGTCTTGTAAC
CAGGAAGAAGTAAAGTACTGGTTGTGTAAGATTCATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021943XLOC_021943Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037103-exon-sc0001572-1491911889:28887..29424TCONS_00037103-exon-sc0001572-1491911889:28887..29424Clytia hemisphaericaexon
TCONS_00037103-exon-sc0001572-1510915933:28887..29424TCONS_00037103-exon-sc0001572-1510915933:28887..29424Clytia hemisphaericaexon
TCONS_00037103-exon-sc0001572-1575043694:28887..29424TCONS_00037103-exon-sc0001572-1575043694:28887..29424Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001572supercontigsc0001572:28887..29424 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.611025	0.380167	0.41338	1.43447	9.55113	3.70603	5.15399	5.38337	1.2277	0.84778	0.595178	1.18002	0.721593	0.635784	0.449642	0.131423	0.242854	0.414863	0	0.719719	1.88214	2.58774	0.514234	2.05644	0.32874	0.237435	10.7965	11.1728	0.923866	2.29545
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037103 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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