TCONS_00037100 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037100
Unique NameTCONS_00037100
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037100 ID=TCONS_00037100|Name=TCONS_00037100|organism=Clytia hemisphaerica|type=transcript|length=155bp
NNGGTTGAAGGACattttccattgatgagcccactCACTTATCTTCTGCA
TGTCACTGTTCAACTCTTGAGAACAGCGAATATGATCTAGGATGAGTGAA
AATAGGGACGAgtcatcagcaaaaattttgattatggAAAGGATCCCCTC
AGGGA
Run BLAST on NCBI

transcript from alignment at sc0001571:1427..1581

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037100 ID=TCONS_00037100|Name=TCONS_00037100|organism=Clytia hemisphaerica|type=transcript|length=155bp|location=Sequence derived from alignment at sc0001571:1427..1581 (Clytia hemisphaerica)
TCCCTGAGGGGATCCTTTccataatcaaaatttttgctgatgacTCGTCC
CTATTTTCACTCATCCTAGATCATATTCGCTGTTCTCAAGAGTTGAACAG
TGACATGCAGAAGATAAGTGagtgggctcatcaatggaaaatGTCCTTCA
ACCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021940XLOC_021940Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037100-exon-sc0001571-1491911889:1427..1581TCONS_00037100-exon-sc0001571-1491911889:1427..1581Clytia hemisphaericaexon
TCONS_00037100-exon-sc0001571-1510915933:1427..1581TCONS_00037100-exon-sc0001571-1510915933:1427..1581Clytia hemisphaericaexon
TCONS_00037100-exon-sc0001571-1575043694:1427..1581TCONS_00037100-exon-sc0001571-1575043694:1427..1581Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001571supercontigsc0001571:1427..1581 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037100 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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