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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00037041 ID=TCONS_00037041|Name=TCONS_00037041|organism=Clytia hemisphaerica|type=transcript|length=576bp
GATTGATTTTCGCAagccaatttctttcaaaaataaggACTTATTTTCAC
GAGCACAGAAAATATTTACGCGAGGataaaatttccgtttttgaactaat
ttcttttattttctttcctaaGGGTTTCCACAAAAGTTatgattaatttt
tttcgcAAGGATtttatttcgcgaattttgaggAAAACTCTAATCTTCAC
gcaaattaatccacttaaggtacaaCCAGAGCAGCAAATGGAAGCAAATT
TTAAGCAGGGGGGTCTATGTTCTATGTTCTAAGCACCTTTGCAGCCTCAA
AGTGTAACGCTGTTGGTTTCTGTGTGCCTTTTTCCTTCttggcttttttt
tttattttaccctTCAAGTAACCTCAAATGGATCGAAAATTCAAGACTTC
ACATAACCTATTTCAATATTTATCTCCTAATAACTAAATAAAAATGTCAT
CTTCCGAATCGAGCGACCAAGCGACGATCGAAGCCCAagaagctgaaatt
ttgagcCTAAAAGCACAATTAGCCGGTGAGTATTTTTATTTACGGCTGTG
CAAGtcaaaagaagatttttgcaaga Run BLAST on NCBI transcript from alignment at sc0001559:46272..47809- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00037041 ID=TCONS_00037041|Name=TCONS_00037041|organism=Clytia hemisphaerica|type=transcript|length=1538bp|location=Sequence derived from alignment at sc0001559:46272..47809- (Clytia hemisphaerica)
GATTGATTTTCGCAAGCCAATTTCTTTCAAAAATAAGGACTTATTTTCAC
GAGCACAGAAAATATTTACGCGAGGATAAAATTTCCGTTTTTGAACTAAT
TTCTTTTATTTTCTTTCCTAAGGGTTTCCACAAAAGTTATGATTAATTTT
TTTCGCAAGGATTTTATTTCGCGAATTTTGAGGAAAACTCTAATCTTCAC
GCAAATTAATCCACTTAAGGTACAACCAGAGCAGCAAATGGAAGCAAATT
TTAAGCAGGGGGGTCTATGTTCTATGTTCTAAGCACCTTTGCAGCCTCAA
AGTGTAACGCTGTTGGTTTCTGTGTGCCTTTTTCCTTCTTGGCTTTTTTT
TTTATTTTACCCTTCAAGTAACCTCAAATGGATCGAAAATTCAAGACTTC
ACATAACCTATTTCAATGTAAGGGATGGTTTGTAATTTGTTTGATTGAAT
TCTTCCTGTTTTGTCTTAAAGTCCGTCCATTTTCATTCGGAATAATCGTT
GACGATTTTTATCAGATACGTTAAGGTCATCACATGAAACCGAACTCATT
TTTATATAATCACAAATCCTCTCATGAAGACGAAAGTGAAAAATTACTGT
GTGCGCTTTGACAGTCGACAGCGCANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTGGTTTTAC
TATTTAATCTGATTTTCCAGGTAGAAAGATCAGATGTCACAGAAGATTGG
ATGTTTTATAAAGTCTATTGTAGTCTATTGGAGAGCCTTATTGTTGTAGC
AAATGAGATATTACAGTTGTCAATTCCTTCCGAGTTACAAAAACCCGAGT
TACGGCGAATGACGTCATAATTTGAGACTTGTGACGTCACATTCATCGTA
ACTTGGGTTTTTGTAACTCTTGTTTTTCAGGCCTCCCTTTTCCTGCTGTT
CACTTTACAGTTGATGCTCTCTAATTCGACGTTCTACTATTCGATACGTT
CCCTTTTTCGATAAAATTAAAAGTCACTTTCAAACGACGCTATGTATCCA
ATTGCTATAGGGGAAGGAACTTTCGTGAGAATTGCAATCATGTTAATCTA
TTTGGTGGATAGATCAAGGGAAAGTTTGCTGTAAACCACTCGGAGTTCCA
ATGTTGAAATTGTTATCTTTCTCGTCTAGATTTATCTCCTAATAACTAAA
TAAAAATGTCATCTTCCGAATCGAGCGACCAAGCGACGATCGAAGCCCAA
GAAGCTGAAATTTTGAGCCTAAAAGCACAATTAGCCGGTGAGTATTTTTA
TTTACGGCTGTGCAAGTCAAAAGAAGATTTTTGCAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00037041-exon-sc0001559-1575043694:47393..47809 | TCONS_00037041-exon-sc0001559-1575043694:47393..47809 | Clytia hemisphaerica | exon |
| TCONS_00037041-exon-sc0001559-1575043694:46272..46430 | TCONS_00037041-exon-sc0001559-1575043694:46272..46430 | Clytia hemisphaerica | exon |
| TCONS_00037041-exon-sc0001559-1510915933:47393..47809 | TCONS_00037041-exon-sc0001559-1510915933:47393..47809 | Clytia hemisphaerica | exon |
| TCONS_00037041-exon-sc0001559-1510915933:46272..46430 | TCONS_00037041-exon-sc0001559-1510915933:46272..46430 | Clytia hemisphaerica | exon |
| TCONS_00037041-exon-sc0001559-1491911889:47393..47809 | TCONS_00037041-exon-sc0001559-1491911889:47393..47809 | Clytia hemisphaerica | exon |
| TCONS_00037041-exon-sc0001559-1491911889:46272..46430 | TCONS_00037041-exon-sc0001559-1491911889:46272..46430 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001559 | supercontig | sc0001559:46272..47809 - |
Blast
The following BLAST results are available for this feature:
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