TCONS_00037037 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037037
Unique NameTCONS_00037037
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length276

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037037 ID=TCONS_00037037|Name=TCONS_00037037|organism=Clytia hemisphaerica|type=transcript|length=276bp
CTTAAGTATAAAAGTGTTTCAAAAATTCGAAGCAAAAATCTAAAACTATC
CAAAATACACTATATAAGTAAAATCATGGAAGCAATTCTTACGAAAGCAA
AAATGGGGGCGGACGAACATTTCGAGGGGCCCTCAAAGAAGAACTTCCAG
GGGATTCTTTTAATTTCCAAGGGCTTGAAAGACAAAGCATTGTCTTTACC
ACCTAGATTTCCTCTTTCCAGGTAAAAAAAGGTAATGGTAATGGAAATGG
TACTCTCAGCCTCagtcaggtgccta
Run BLAST on NCBI

transcript from alignment at sc0001558:9924..10199

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037037 ID=TCONS_00037037|Name=TCONS_00037037|organism=Clytia hemisphaerica|type=transcript|length=276bp|location=Sequence derived from alignment at sc0001558:9924..10199 (Clytia hemisphaerica)
taggcacctgactGAGGCTGAGAGTACCATTTCCATTACCATTACCTTTT
TTTACCTGGAAAGAGGAAATCTAGGTGGTAAAGACAATGCTTTGTCTTTC
AAGCCCTTGGAAATTAAAAGAATCCCCTGGAAGTTCTTCTTTGAGGGCCC
CTCGAAATGTTCGTCCGCCCCCATTTTTGCTTTCGTAAGAATTGCTTCCA
TGATTTTACTTATATAGTGTATTTTGGATAGTTTTAGATTTTTGCTTCGA
ATTTTTGAAACACTTTTATACTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021887XLOC_021887Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037037-exon-sc0001558-1491911889:9924..10199TCONS_00037037-exon-sc0001558-1491911889:9924..10199Clytia hemisphaericaexon
TCONS_00037037-exon-sc0001558-1510915933:9924..10199TCONS_00037037-exon-sc0001558-1510915933:9924..10199Clytia hemisphaericaexon
TCONS_00037037-exon-sc0001558-1575043694:9924..10199TCONS_00037037-exon-sc0001558-1575043694:9924..10199Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001558supercontigsc0001558:9924..10199 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.521429	0	1.18078	1.15521	2.10953	0.555659	2.68152	2.5104	1.75759	1.6328	0	0.694538	1.04036	0	1.48042	1.90647	0.391435	1.60483	1.10858	0.580025	0	0.737716	0.59786	1.63063	1.11967	2.4982	5.71986	3.0522	2.31498	2.3586
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037037 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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