TCONS_00037002 (transcript) - C. hemisphaerica

Overview
NameTCONS_00037002
Unique NameTCONS_00037002
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00037002 ID=TCONS_00037002|Name=TCONS_00037002|organism=Clytia hemisphaerica|type=transcript|length=109bp
CGTGTATATTTAAAGCTCGTATCAAGAAGTACTCTAGATATAACCACTCA
CAGTAGAGATGAAATGAGTGTTTTTGAacTCTTCAGTAAAGCATTCTAAT
GGGAAGCCT
Run BLAST on NCBI

transcript from alignment at sc0001551:25980..26491+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00037002 ID=TCONS_00037002|Name=TCONS_00037002|organism=Clytia hemisphaerica|type=transcript|length=512bp|location=Sequence derived from alignment at sc0001551:25980..26491+ (Clytia hemisphaerica)
CGTGTATATTTAAAGCTCGTATCAAGAAGTACTCTAGATATAACCACTCA
CAGTAGAGATGAAATGAGTGTTTTTGAGTAAGTCTTTTTTGTTAAAACAG
TTCTGGTGTTTTTGTTAAGATGTTTACAAGCTAAGGAATGTTTCTTGTAT
GTAAGTAGATCGGGTGATGGTGGAATAGCTACTGCTACTACTTAGATAAT
GATCTTGAAATTAAACTTTACTTGACCATTCCATACTGAGATATAATTAC
TTTCCTCTTCTCCTTACAAATTTTGAGTAGGAGTACTTATCCAACAATGA
ATGTTTAAGGGTGAAAACTATTCATTCTGCGTTAGGGATCTCAGAATATA
ATTGAGATGATTCCAGCTTTAGAAGCATTTTCAAAGATTTGATACATGGT
CTATGGCAACATAGTTAAACTGTGCGAATCATAGTTGCCTATACGACGGa
aagaaaaacactgatttatttttatttcagacTCTTCAGTAAAGCATTCT
AATGGGAAGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021863XLOC_021863Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00037002-exon-sc0001551-1491911889:25980..26056TCONS_00037002-exon-sc0001551-1491911889:25980..26056Clytia hemisphaericaexon
TCONS_00037002-exon-sc0001551-1510915933:25980..26056TCONS_00037002-exon-sc0001551-1510915933:25980..26056Clytia hemisphaericaexon
TCONS_00037002-exon-sc0001551-1575043694:25980..26056TCONS_00037002-exon-sc0001551-1575043694:25980..26056Clytia hemisphaericaexon
TCONS_00037002-exon-sc0001551-1491911889:26460..26491TCONS_00037002-exon-sc0001551-1491911889:26460..26491Clytia hemisphaericaexon
TCONS_00037002-exon-sc0001551-1510915933:26460..26491TCONS_00037002-exon-sc0001551-1510915933:26460..26491Clytia hemisphaericaexon
TCONS_00037002-exon-sc0001551-1575043694:26460..26491TCONS_00037002-exon-sc0001551-1575043694:26460..26491Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001551supercontigsc0001551:25980..26491 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00037002 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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