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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036987 ID=TCONS_00036987|Name=TCONS_00036987|organism=Clytia hemisphaerica|type=transcript|length=654bp
ACAATGAACATGAATGGAATAATTTGCGACACAAGCATCATTTCTATGGG
GCACAAATCATCTAATTCAGGAATTCTTGTAGACAGCAAATTGTTTGCTT
GAGCCTGCACTggtaacttttctttttttattgctttATCACATGGGTGG
CAAATCCAGTATTTTTCTTCTGAATCACAATGTAAGTTGACAGCATCACA
TTCTTCAAACATTGGTAAGCCTTCATATTCTTTATGGAGGAACCGCTTGC
CGTTTCCCTTGTACTCCCATTTTAGACATATGTGACATTTGTTTGTCGGG
CCGTCTTGTGTAGCTGTTACAAATTTTTGCTTTACGATTTCAAAAGCTTT
AGTTAAAGTTATCAAAGGGTCAACCATGCTTGATCTTTGGACttcatcaa
attctttttgttccTCTAGTTTGCTAAGCTGTCGAAATTTCCCCTTTTTG
ATCcgattattttttttagcactttctttttcaaaaTCATTTTGATTTTC
CCTCAAATTTAGCATTCTTTTTCGTGCagatttttggttttctttttttt
ctaaatcattttgattttctcGAAAAAGCCTTTTCTTTGATTTATCAGAT
TTTCGACTTTCATctctttcaaaatcattttgattttccctcaaattttg
catt Run BLAST on NCBI transcript from alignment at sc0001550:9771..10825+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036987 ID=TCONS_00036987|Name=TCONS_00036987|organism=Clytia hemisphaerica|type=transcript|length=1055bp|location=Sequence derived from alignment at sc0001550:9771..10825+ (Clytia hemisphaerica)
ACAATGAACATGAATGGAATAATTTGCGACACAAGCATCATTTCTATGGG
GCACAAATCATCTAATTCAGGAATTCTTGTAGACAGCAAATTGTTTGCTT
GAGCCTGCACTggtaacttttctttttttattgctttATCACATGGGTGA
CAAATCCAGTATTTTNTggtaacttttctttttttattgctttATCACAT
GGGTGGCAAATCCAGTATTTTTCTTCTGAATCACAATGTAAGTTGACAGC
ATCACATTCTTCAAACATTGGTAAGCCTTCATATTCTTTATGGAGGAACC
GCTTGCCGTTTCCCTTGTACTCCCATTTTAGACATATGTGACATTTGTTT
GTCGGGCCGTCTTGTGTAGCTGTTACAAATTTTTGCTTTACGATTTCAAA
AGCTTTAGTTAAAGTTATCAAAGGGTCAACCATGCTTGATCTTTGGACtt
catcaaattctttttgttccTCTAGTTTGCTAAGCTGTCGAAATTTCCCC
TTTTTGATCcgattattttttttagcactttctttttcaaaatctttttg
attttccctcaaattttgcattctttttcgcgcatatttttggttttctt
tcttttctacatcattttgattttcccgcaaattttgcattctttttcgt
gcagatttttggttttctttctttcctacatcattttgattttcccgcaa
attttgcattctttttcgtgcagatttttggttttctttcttttctaaat
cattttgattttccctcaaattttgcattctttttcgtgcagatttttgg
ttttctttcttttctaaatcattttgattttccctcaaattttgcattct
ttttcgtgcagatttttggttttctttcttttctacaTCATTTTGATTTT
CCCTCAAATTTAGCATTCTTTTTCGTGCagatttttggttttcttttttt
tctaaatcattttgattttctcGAAAAAGCCTTTTCTTTGATTTATCAGA
TTTTCGACTTTCATctctttcaaaatcattttgattttccctcaaatttt
gcatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036987-exon-sc0001550-1491911889:9771..9912 | TCONS_00036987-exon-sc0001550-1491911889:9771..9912 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1510915933:9771..9912 | TCONS_00036987-exon-sc0001550-1510915933:9771..9912 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1575043694:9771..9912 | TCONS_00036987-exon-sc0001550-1575043694:9771..9912 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1491911889:9969..10311 | TCONS_00036987-exon-sc0001550-1491911889:9969..10311 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1510915933:9969..10311 | TCONS_00036987-exon-sc0001550-1510915933:9969..10311 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1575043694:9969..10311 | TCONS_00036987-exon-sc0001550-1575043694:9969..10311 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1491911889:10657..10825 | TCONS_00036987-exon-sc0001550-1491911889:10657..10825 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1510915933:10657..10825 | TCONS_00036987-exon-sc0001550-1510915933:10657..10825 | Clytia hemisphaerica | exon |
| TCONS_00036987-exon-sc0001550-1575043694:10657..10825 | TCONS_00036987-exon-sc0001550-1575043694:10657..10825 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001550 | supercontig | sc0001550:9771..10825 + |
Blast
The following BLAST results are available for this feature:
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