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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036962 ID=TCONS_00036962|Name=TCONS_00036962|organism=Clytia hemisphaerica|type=transcript|length=211bp
tgtaaataCCCTTATTcctttttcatcaaatattgCAAAAGATATCTAGA
GGAGAACTACTTCAGCTTTATAAATCATGAATCATTTACATCAGtatttc
ttGGTCAAGATGACTGGCCACAATGATATGGTTAAGatctttttggttct
ttgtgcATCTTTGGTGATGGGTGAATGCTGTAGGAAATTGGTACACTTTC
CAGAACTACAC Run BLAST on NCBI transcript from alignment at sc0001544:39682..41712+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036962 ID=TCONS_00036962|Name=TCONS_00036962|organism=Clytia hemisphaerica|type=transcript|length=2031bp|location=Sequence derived from alignment at sc0001544:39682..41712+ (Clytia hemisphaerica)
tgtaaataCCCTTATTcctttttcatcaaatattgCAAAAGATATCTAGA
GGAGAACTACTTCAGCTTTATAAATCATGAATCATTTACATCAGGTacac
tgttttttttaataagaacaaactatataagagaataaggcttcgatggc
cagaatcctaaaaacattttaaggctttgcggactctaaaacatccaatt
tcatagtaaaatggtcaaaaatactcagaaaatggcgaaaataagaacat
attaagaacatgttaagaacatttttaggcttaaaactcaaaaggttaag
aacatccgaaggcttaaaaatcttttggatgttattataataaaaaacgt
GAAGCCCTCTCAGGTCTTCGTTCGCCATTCAACCGAAAGTACAAACAACT
TTGTAAAGTCAATAACAATATATCACTAATACTCAGAAAGCAGTCAGAAC
GACATTAGTCTAGATTGCGCTTAGGCCCTTCTACgggtcaagttgaacat
ttacaagaatttttgtcattggattggttgttaactattcaaacaaaaac
ttttattattgttttgaatgaccaattatgtgagcatcttgtaaaaactt
caatacAACTGCTTTCTACTCGAAAAGGGAAATAAATATCTTTGAACTTG
TTCAATCGTTACTAGTTTTGTATCTGTAAGGATTCGATAACGACCTTACC
CGTCTTGAGCtgtaaatttttgccaattggtagtgtgaaggttttgATCA
CAGACCCACAGATATTTTGTGttgattttagtatttcttGGTCAAGATGA
CTGGCCACAATGATATGGTTAAGatctttttggttctttgtgcATCTTTG
GTGATGGGTGAATGCTGTAGTAAGTTTTTTTCTCCACACATTTTTTGTGT
AGTTTTGCGGTTTTGACTGAAATTCGTAGACCCAAAATTTGATTTTACGT
TATCGTTAAAATCGCATCGTTAAAATCGTATCGTTAAAATCGTATCGTTA
AAGTGGTACCCTGCTGGTAGAACTATcaataaaaattgtaaaaaagtgat
aCCCTATGGTACCTCTAGCCTTGTAAGTGAATCTAAAGCGCTAGACCTAC
CTTCCCCGTAAATAATCATGATGATGCCAATGATCAATTGTATGACcttt
cagaagcagccaccgacctaaaatttgcaaatacctgttctgatttgcca
gctggaagaaTTTCCCCGAAATTAAAGGCTCTGgacatagtgaaaaatca
atttcagaatttgaagataaaaccttatgttttcgctgctttgacatgtt
taagaacaaactgcttttgaaaaaatgaatttaagtaattacataaTGAG
TAATTgaggaataagtgtggcatggaccttaataaaacgtcataacgacg
ctattcgtatacttttcacaaaaaagcctaatctccttggggaaatcatt
ttattgtttaaaactttttttaatgacaaataatttctttatttagattt
tttcggaaaaattttctatttggctacatcccaagttatagctgttttcg
taTGCAAATTTAGTGGGGAAAATCGccaaaatgaggttttttggagattt
taaaggaaagatacttaCACAAAAACtttccgaaattgtatttttagata
ctaaatagatacatcacctgaaccaaaaaaaattccaaatgtttgatttt
taccgagattagggccttgaaaggtgaaatactcttcttcgaaaaactct
tcgttttcttcttcatttaattttttcatttcaatttttcgatttttaaa
ttctaaaaaggtttaacaggacatataaaaaaagaccgactctgatcaaa
gatggtggataaaGCTTtgtaaagaatttaaaaaacatcAGTGTTGTCAT
TACTTTGTacaagaattttgaaatttccatagaTATTGGTTTATTTATTT
TCGTATTATTGGGGATCGTAATTAATAGCTTCATTTTATGTATCTCTCTT
AGGGAAATTGGTACACTTTCCAGAACTACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036962-exon-sc0001544-1491911889:39682..39775 | TCONS_00036962-exon-sc0001544-1491911889:39682..39775 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1510915933:39682..39775 | TCONS_00036962-exon-sc0001544-1510915933:39682..39775 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1575043694:39682..39775 | TCONS_00036962-exon-sc0001544-1575043694:39682..39775 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1491911889:40463..40550 | TCONS_00036962-exon-sc0001544-1491911889:40463..40550 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1510915933:40463..40550 | TCONS_00036962-exon-sc0001544-1510915933:40463..40550 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1575043694:40463..40550 | TCONS_00036962-exon-sc0001544-1575043694:40463..40550 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1491911889:41684..41712 | TCONS_00036962-exon-sc0001544-1491911889:41684..41712 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1510915933:41684..41712 | TCONS_00036962-exon-sc0001544-1510915933:41684..41712 | Clytia hemisphaerica | exon |
| TCONS_00036962-exon-sc0001544-1575043694:41684..41712 | TCONS_00036962-exon-sc0001544-1575043694:41684..41712 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001544 | supercontig | sc0001544:39682..41712 + |
Blast
The following BLAST results are available for this feature:
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