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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036952 ID=TCONS_00036952|Name=TCONS_00036952|organism=Clytia hemisphaerica|type=transcript|length=1026bp
taaaaatattatgatacaaataatgaaaactagcttatgaaatgaaaaac
atcaAGTATTCgtgttcattttttttcactAGCATCATTTTTAGTTTGTT
GTTGATCTTTGagtttttcaacaattttcttaGTCCTTTTTCTTTGGTCT
TGGCTTTTTGCTCTACACGATATTTGTCAATAATATCTCTAGCTGTAGAA
AATGCTCTTACCCTTAGGTAAAGGGAATTAGTTTTTCCAACAAGTTATTA
CGTGTCTCTTTACTTAATTCGAAGATGCATTTAGTAAGAATATTATTGTA
AACTCCATTTATGTCAATATTCTTTATGAGATTAGAAGTCATTTTATTTG
TTTCGATCCTTCTGAAGTGTCCTATATTGGTTTCAATTCGAAAATGTTCT
TCGACTGTTCTAAAGATATATTCTGCTTGTTTATTTACGGCTGTTAATCC
ACCTCTCGTTaaagtttttatcaatttctGATCATCGAAATCTTTAGTTG
TCATACTATTGAGAGCTACAATCATTGCCTGACTTTGTTGGGTTTTATAG
TTCCTATGTTTTTGGATTTTCCTAAGGGTTTTCTTTACTACATAACCAGC
CAGGTATTGAAGTGAACCCAATTCCTTTGCACTAATCTCTAGAGGTTTGT
TAGTTGGTCCTGCAGCTGGGCGTTTGAAGAATGATAATACCTTATCACCA
ACTCGTTTAGCCAATAAAGTACTGTAGGGTTTTTCTAGacttggaaaata
caaattaGCTTTGTAAACAATCTTCAAATAATAATCTTGATAGTATTTTT
CAGCATCACCTTTTTTGGACAAACTCTTGAGAAAACCTTTCACTTCAGGT
AATAGCAGTGTGCTGCTGTGCTGAATCTTGTCATAGTTAGAGATTTTGGT
TCTCATTCCTTCAGGGTAACACAAATTACCTGATAATTTCACAATAGCTT
CTTTGATCAACGTCTGTAAACCATCTTCGTCAATAGGGCAACGATTGGAT
TCATTATCGTTCGAGTTATGATCAGA Run BLAST on NCBI protein sequence of TCONS_00036952-protein >TCONS_00036952-protein ID=TCONS_00036952-protein|Name=TCONS_00036952-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
SDHNSNDNESNRCPIDEDGLQTLIKEAIVKLSGNLCYPEGMRTKISNYDK
IQHSSTLLLPEVKGFLKSLSKKGDAEKYYQDYYLKIVYKANLYFPSLEKP
YSTLLAKRVGDKVLSFFKRPAAGPTNKPLEISAKELGSLQYLAGYVVKKT
LRKIQKHRNYKTQQSQAMIVALNSMTTKDFDDQKLIKTLTRGGLTAVNKQ
AEYIFRTVEEHFRIETNIGHFRRIETNKMTSNLIKNIDINGVYNNILTKC
IFELSKETRNNLLEKLIPFT Run BLAST on NCBI transcript from alignment at sc0001542:44130..45155 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036952 ID=TCONS_00036952|Name=TCONS_00036952|organism=Clytia hemisphaerica|type=transcript|length=1026bp|location=Sequence derived from alignment at sc0001542:44130..45155 (Clytia hemisphaerica)
TCTGATCATAACTCGAACGATAATGAATCCAATCGTTGCCCTATTGACGA
AGATGGTTTACAGACGTTGATCAAAGAAGCTATTGTGAAATTATCAGGTA
ATTTGTGTTACCCTGAAGGAATGAGAACCAAAATCTCTAACTATGACAAG
ATTCAGCACAGCAGCACACTGCTATTACCTGAAGTGAAAGGTTTTCTCAA
GAGTTTGTCCAAAAAAGGTGATGCTGAAAAATACTATCAAGATTATTATT
TGAAGATTGTTTACAAAGCtaatttgtattttccaagtCTAGAAAAACCC
TACAGTACTTTATTGGCTAAACGAGTTGGTGATAAGGTATTATCATTCTT
CAAACGCCCAGCTGCAGGACCAACTAACAAACCTCTAGAGATTAGTGCAA
AGGAATTGGGTTCACTTCAATACCTGGCTGGTTATGTAGTAAAGAAAACC
CTTAGGAAAATCCAAAAACATAGGAACTATAAAACCCAACAAAGTCAGGC
AATGATTGTAGCTCTCAATAGTATGACAACTAAAGATTTCGATGATCaga
aattgataaaaactttAACGAGAGGTGGATTAACAGCCGTAAATAAACAA
GCAGAATATATCTTTAGAACAGTCGAAGAACATTTTCGAATTGAAACCAA
TATAGGACACTTCAGAAGGATCGAAACAAATAAAATGACTTCTAATCTCA
TAAAGAATATTGACATAAATGGAGTTTACAATAATATTCTTACTAAATGC
ATCTTCGAATTAAGTAAAGAGACACGTAATAACTTGTTGGAAAAACTAAT
TCCCTTTACCTAAGGGTAAGAGCATTTTCTACAGCTAGAGATATTATTGA
CAAATATCGTGTAGAGCAAAAAGCCAAGACCAAAGAAAAAGGACtaagaa
aattgttgaaaaactCAAAGATCAACAACAAACTAAAAATGATGCTagtg
aaaaaaaatgaacacGAATACTtgatgtttttcatttcataagctagttt
tcattatttgtatcataatattttta Coding sequence (CDS) from alignment at sc0001542:44130..45155 >TCONS_00036952 ID=TCONS_00036952|Name=TCONS_00036952|organism=Clytia hemisphaerica|type=CDS|length=813bp|location=Sequence derived from alignment at sc0001542:44130..45155 (Clytia hemisphaerica)
TCTGATCATAACTCGAACGATAATGAATCCAATCGTTGCCCTATTGACGA
AGATGGTTTACAGACGTTGATCAAAGAAGCTATTGTGAAATTATCAGGTA
ATTTGTGTTACCCTGAAGGAATGAGAACCAAAATCTCTAACTATGACAAG
ATTCAGCACAGCAGCACACTGCTATTACCTGAAGTGAAAGGTTTTCTCAA
GAGTTTGTCCAAAAAAGGTGATGCTGAAAAATACTATCAAGATTATTATT
TGAAGATTGTTTACAAAGCtaatttgtattttccaagtCTAGAAAAACCC
TACAGTACTTTATTGGCTAAACGAGTTGGTGATAAGGTATTATCATTCTT
CAAACGCCCAGCTGCAGGACCAACTAACAAACCTCTAGAGATTAGTGCAA
AGGAATTGGGTTCACTTCAATACCTGGCTGGTTATGTAGTAAAGAAAACC
CTTAGGAAAATCCAAAAACATAGGAACTATAAAACCCAACAAAGTCAGGC
AATGATTGTAGCTCTCAATAGTATGACAACTAAAGATTTCGATGATCaga
aattgataaaaactttAACGAGAGGTGGATTAACAGCCGTAAATAAACAA
GCAGAATATATCTTTAGAACAGTCGAAGAACATTTTCGAATTGAAACCAA
TATAGGACACTTCAGAAGGATCGAAACAAATAAAATGACTTCTAATCTCA
TAAAGAATATTGACATAAATGGAGTTTACAATAATATTCTTACTAAATGC
ATCTTCGAATTAAGTAAAGAGACACGTAATAACTTGTTGGAAAAACTAAT
TCCCTTTACCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036952-exon-sc0001542-1491911889:44130..45155 | TCONS_00036952-exon-sc0001542-1491911889:44130..45155 | Clytia hemisphaerica | exon |
| TCONS_00036952-exon-sc0001542-1510915933:44130..45155 | TCONS_00036952-exon-sc0001542-1510915933:44130..45155 | Clytia hemisphaerica | exon |
| TCONS_00036952-exon-sc0001542-1575043694:44130..45155 | TCONS_00036952-exon-sc0001542-1575043694:44130..45155 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001542 | supercontig | sc0001542:44130..45155 . |
Blast
The following BLAST results are available for this feature:
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