TCONS_00036936 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036936
Unique NameTCONS_00036936
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1529

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036936 ID=TCONS_00036936|Name=TCONS_00036936|organism=Clytia hemisphaerica|type=transcript|length=1529bp
CTTAACTGAATGGGACATActtattcaagattttttgtttatttttcgct
TCTTCAAATCCCATAAATAAGTGGGTGAAAATTAAGACAAACTCATTCTA
TTCTATATTACTGATTGAACTCGGAAGAAGAAGAAGtgtaaagatgaaaa
ttctGATTTGCGTTTTTTTGACGATTGGGGTGACATGGGCATGGAACGAG
CACATGGAAGaTGGAAACTATTATGAAGGTGATATTAAATTATCTTACAA
GCAACTTTTGTTTGGTTCCATCAGAGGAAAACGTTGGACTAATGGCATTG
TCCCATATGTTGTGCACTCAAGTCTTGCCGGCGTTGAGAATGTGATCAAT
GATGCCATTGGTGTTTACCACAAAAAGACTTGTTTGAAATTCGTCAAACG
CACCAATCAACGAAATTATATTGAATTCTTCAAAGAAACTGGGTGTTGGT
CTTACGTCGGTATGAGTGGAGGAAAACAACAACTCAGTCTTGGTACTGGA
TGCCACTGGACAGCTACAACTCAACACGAAATCGGACACGCTATTGGTCT
TCAACATGAACAAACCAGACCAGACAGAAATCAATACGTCAAAATCCATC
TCAACAACCTCAACAATCAAAaaTATGCTGGCAATTTTCATATCAATAGT
GGTGTCGACTCTTTGGGTACTCCTTATGACTTCTATTCAATGATGCATTA
TGGGTCAACAGCCTTTGCGAAGAGTGGTACCAAAACCATCACAACTTTGG
ATAGATCTAAGCAACGAATCATTGACAATAACTACNGTACCAAAACCATC
ACAACTTTGGACAGATCTAAGCAACGAATCATTGACAATAACTACCATTA
TGGAATGAGTGATATCGATGCAAAACAAATTAATCTCATGTACAAGTGTG
CAGGAGGTGGTGGTAGTGGCAGCAACAATGGTGATCTCAAAAATGACGGT
GAGGATTGCTGGGGTCGTTGTTATGGCAAAGGAGGAGCATGTCCACAATT
CTGTGGTCGAACTGGATTGTGTTGTCGTACTGGATGGAATGATCCCGGTT
GCGAAAGAGCATCAAAACCTTGCAACTATCATTGTTGTACAGCGCCTAAG
AAAGAAGTAAAAAATGTTGGCAAGGATTGTTGGCACCATTGTTCAAACAA
AGGAGGAAAATGCTCGTCAGGATATTGTGGAAAAGATGGTCTTTGCTGCA
GGAGAGGGTGGAATGATAGAGGCTGTGAAAAAGCAAAGGCTGCATGTGGA
TATCATTGCTGTACTGCTTAAAGAATCGAGTCTTGTAAATATTAATTATA
AAACAAatatttattcatgatatgcaccattgcagtGGCTGATTgtttgc
aagtgacgtattgactgattttacgtcatttacaaccaatcagctgtcta
ATTTGTGAATGAAAACATAGCAATGATGCATATCGTGAATTGGTTTAAGT
TTATGGGAATAATATAATCATATGAATACAATTTTCAGTTattaactttc
tatttattaCCTCATTTACTATccctaaa
Run BLAST on NCBI

transcript from alignment at sc0001539:36263..45174+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036936 ID=TCONS_00036936|Name=TCONS_00036936|organism=Clytia hemisphaerica|type=transcript|length=8912bp|location=Sequence derived from alignment at sc0001539:36263..45174+ (Clytia hemisphaerica)
CTTAACTGAATGGGACATActtattcaagattttttgtttatttttcgct TCTTCAAATCCCATAAATAAGTGGGTGAAAATTAAGACAAACTCATTCTA TTCTATATTACTGATTGAACTCGGAAGAAGAAGAAGtgtaaagatgaaaa ttctGATTTGCGTTTTTTTGACGATTGGGGTGACATGGGCATGGAACGAG CACATGGAAGGTATCAGTTTAATCCTTTGGGAATAAATAACAAATATTAA CCAACCGTCAAAGTCCCCGTTTCCCAGTGGTCACAGGACGTCGAGTCGAC GTCGAAAATTAGTCTTCTTTAAATGATTAACTAACAAGCACCATAAGCAA CACTTTTAGAGCCTGCAAATACATCTCAAGGCTCGCCCCATTCTTCTGAA CAATTTTCAATTGAGAATTTTTCACTTCTCTATGGTGACATAATTTAGAT GTCTCGACAACGTCTATAAATAACGGGTGAATAGGAGTCTtagattttcc taaaaaagcaaagcattgtgggactgtttcgggggtattacaatagaaat cacTTAGGAATTTCTCGAAGGAATTCTATCGTAATACCctcgaaacaatc ccataaTACATcactgttttagaaaaatcaaaaactccgataaggccTAT TGGCCAGACGTCTTCGGAAGACGATGACCAAACTTAGACAGGGCGAGCCA AAACTGATGTCTCCACGACATCTACAGGGCGTTGTGTTCTACACTCTATT TAATAGATTCTAGAAAATTGGTTGAGATACAAATTCAAAAGATCAGAAGT GAAGGACTTTAAACcttgattcttttgttttctagaTGGAAACTATTATG AAGGTGATATTAAATTATCTTACAAGCAACTTTTGTTTGGTTCCATCAGA GGAAAACGTTGGACTAATGGCATTGTCCCATATGTTGTGCACTCAAGTCT TGGTAAGTGTAATAAATAGCTGACAGAAATAAGTTACACGAGGGTTTATA TTGCGGTTAAGAAAAATCATTGATTAAAAAACTCACTTATCATATCTAAT GTGAAATACTTTTGCTTGTAGCCGGCGTTGAGAATGTGATCAATGATGCC ATTGGTGTTTACCACAAAAAGACTTGTTTGAAATTCGTCAAACGCACCAA TCAACGAAATTATATTGAATTCTTCAAAGAAACTGGGTAAGGGATTGTAG TGATTAAACAAAAAAGGCTacgcgttttttttaagaataaactatataaa aaaTGAACCTTCAATGGCAAAAATATTTAGACAACAAGTCCCTTGACTTG CAAAATTGAACCAGCAAAAgtactcacaaaatggcgaaaataagaacatt ttttaagaacttttttctAGGCTAAAAACTAAAAGCTAAAGGAGATTTGA GGGCTTCAAAGAtttcttatataaaataaatatttataaatttgaaTGTT TTGCACAGGTGTTGGTCTTACGTCGGTATGAGTGGAGGAAAACAACAACT CAGTCTTGGTACTGGATGCCACTGGACAGCTACAACTCAACACGAAATCG GACACGCTATTGGTAAAGCGATAAATTCACTATAAAAGACCTTGCAACAG CAATAAGACCCCGGGGGGGGttcttaggcaaatggagggcaCGGTATGTG TCTTTTTCGgttttccaaagtcccgctaaagGTCGAAAAAGgcggagaaa taggaaaatttcaacttttttacccCGGGAatgatcgaaatttggtcaaa attggtcaaatttgtcccaataagggtcgtaaaattcgaaaaattttcca tttttttttcttctttttagtccCAGTAGGGTCCAAGGGAATAAGACTAA TTCTCATCAGAGTGGTTTACACATAAAAAGTTTTACCAAGGGCCTAAGGG AGAGAATACTATTTTAATCTTCAAGCTTTAATAATCTAAAAAGTAAAAGC TCCACAAACGTTTTTTCTTATCAGGTCTTCAACATGAACAAACCAGACCA GACAGAAATCAATACGTCAAAATCCATCTCAACAACCTCAACAATCAAAG TAAGTTTTCAGAATTTGACTAAACAGCTGCACGAGCATTATTCCTTATCA AATATACATCTTTCCGACCGTAGTTGCGCGGTCAGGCGCATACCACTTTA TTATCTAagttaatttaccaccctaaactcgagcAAATTCTTATTTTACA CTTTTTCTATCGTCTTTAGGTTCggaaaaagactgggacggttttagggt ggcaAAACGGACAACAAATGCCCGTTCGGCAACTGGCCGTtacggtcgaa aaagtgtaATCTGATAtacactttttacttttttttttacttagaaTATG CTGGCAATTTTCATATCAATAGTGGTGTCGACTCTTTGGGTACTCCTTAT GACTTCTATTCAATGATGCATTATGGGTGAGTGGTGGTTTACTTGATCGG GAGAGAGGTCCATTCGTAATTAATTGTAGATCATATATATTTTCCCCTAA TTGTCGTCAAATTTTCGGCCCAAACCATGTACCCGCTTTTTGTTGAGTAG TTTGTAGAGCAGGTATTCTAATCGTGTTGTGTAATAAAAGAAGCatcaga aatcaaaaacatAAATCACCACTTAACTTAAATTTGTTTAACGagtttca tcaatttttgacTCTAAACACGATTGGAGTCTAGCCTATGTAGTCTACCC CTTGGAGAAATAGGCTCAATCtagtattttctttgaaaagacaTCTAATT GCATAATCATCCAAACTTAGGTCAACAGCCTTTGCGAAGAGTGGTACCAA AACCATCACAACTTNgactgggacggttttagggtggcaAAACGGACAAC AAATGCCCGTTCGGCAACTGGCCGTtacggtcgaaaaagtgtaATCTGAT AtacactttttacttttttttttacttagaaTATGCTGGCAATTTTCATA TCAATAGTGGTGTCGACTCTTTGGGTACTCCTTATGACTTCTATTCAATG ATGCATTATGGGTGAGTGGTGGTTTACTTGATCGGGAGAGAGGTCCATTC GTAATTAATTGTAGATCATATATATTTTCCCCTAATTGTCGTCAAATTTT CGGCCCAAACCATGTACCCGCTTTTTGTTGAGTAGTTTGTAGAGCAGGTA TTCTAATCGTGTTGTGTAATAAAAGAAGCatcagaaatcaaaaacatAAA TCACCACTTAACTTAAATTTGTTTAACGagtttcatcaatttttgacTCT AAACACGATTGGAGTCTAGCCTATGTAGTCTACCCCTTGGAGAAATAGGC TCAAattgtattttctttaaaaagacaTCTAATTGCATAATCATCCAAAC TTAGGTCAACAGCCTTTGCGAAGAGTGGTACCAAAACCATCACAACTTTG GACAGATCTAAGCAACGAATCATTGACAATAACTACCATTATGGAATGAG TGATATCGATGCAAAACAAATTAATCTCATGTACAAGTGTGCAGGNctgg gacggttttagggtggcaAAACGGACAACAAATGCCCGTTCGGCAACTGG CCGTtacggtcgaaaaagtgtaATCTGATAtacactttttactttttttt ttacttagaaTATGCTGGCAATTTTCATATCAATAGTGGTGTCGACTCTT TGGGTACTCCTTATGACTTCTATTCAATGATGCATTATGGGTGAGTGGTG GTTTACTTGATCGGGAGAGAGGTCCATTCGTAATTAATTGTAGATCATAT ATATTTTCCCCTAATTGTCGTCAAATTTTCGGCCCAAACCATGTACCCGC TTTTTGTTGAGTAGTTTGTAGAGCAGGTATTCTAATCGTGTTGTGTAATA AAAGAAGCatcagaaatcaaaaacatAAATCACCACTTAACTTAAATTTG TTTAACGagtttcatcaatttttgacTCTAAACACGATTGGAGTCTAGCC TATGTAGTCTACCCCTTGGAGAAATAGGCTCAATCtagtattttctttga aaagacaTCTAATTGCATAATCATCCAAACTTAGGTCAACAGCCTTTGCG AAGAGTGGTACCAAAACCATCACAACTTTGGATAGATCTAAGCAACGAAT CATTGACAATAACTACNGTACCAAAACCATCACAACTTTGGACAGATCTA AGCAACGAATCATTGACAATAACTACCATTATGGAATGAGTGATATCGAT GCAAAACAAATTAATCTCATGTACAAGTGTGCAGGTTGGTTTGTTTGTTA ctgaaaacacttttttaaaagaacaaactatataagacaGTTTGTCTATA GATTAAAGAACaagtttaagaacattataTTGTTTTGTGGACTCtaacag tctgtgccactaactcgatcgggaagattcttccaaaattggaagattct tccgGAATGGGAAGAATCCTCCCAAACGGGAAATTAACTTAACACCCAAA CGGGTTAACGGACTTCCAGATCGGGAAGAAGCGAGAAGCTAAGGAAAACT CGATCGGGTTGGaacttcccgtttgggaagtttacgcaatttttttcaca atttaacaagatttctacggtaaagtctacttttctttcggtgaaaaacc ttaaaatttgatgcttcttcacctccaaaaagtttcaacNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNtcaattttcaacttcccaaagaggaagaatcttccaaaacgggcaga aaaaaatagagtaagttcttcccgttcgggaaggttcttcccatttcgga agattcttcccgatcgagttagtggcacagactgtctAAAACACCCAGTT TCTTTATGAGTATggataaaaataagaacatgctaagaacatctttaggc ttaaaTGTTAACATCCGAAGCATTAAAAAACTTTGTATATTTCGAgtttt ccattttcttttttgttttattcttcATAACCAAGGTGGGGAATCCAGTT GAAAAAAAAGGAACAttaaaaaaaggaggttttgaagggggggggggggg gtttatcTAGACTGAGCCATTGGAATCCAGGTATTctcatttaaaaattt gaaatactcAAATCACACGAACTTTTCTTTTTAGGAGGTGGTGGTAGTGG CAGCAACAATGGTGATCTCAAAAATGACGGTAAATATTCTCACGACCTTT atattagcctatttcataggattcgtgtttttAGTACATGATATTTTTCT ACGCCATTACAGTGATAAAGTTTTCTTTCGTGAATTTAGATTATATAAAT TTAACAAAAGAAATGGAAAATAATTCCAAAGTCAGTTGAATGGTGACAGA AACTCTATTTATTCAACATATTTCTCAAAGGACTGCACAGATTTGAGCAT TTTGCTCCTTtgaattgaatagaaaatagcatgGATGCACAAATCCTATA AAATAGGCTAGTAACCATCCAGGATCTTTGAATTAAATTAACCAAAATCT TACAATGATTTACAGAACATCTTGTACcggtttttttcgaaaaaaaatgt tacatTTGTTTGAAATCTCGGTGGAGGCAAGAATGGGTATGCGGACGTAC CGCTTGGCAGGGTTCCTTTTTTTACCCCTGGAAATATGTGACAAAATcac gaaattttaagaaatggCTCTGGCAGGGCtagaattttgtaattttttac tcTGACCGGGTCAATTTTATGTCATTTTAGCACTTTTTGCAAAACATTTG GGAATTCCTAACTTTTTGACACTGATAGGGCTTATTTTTCGTCGAAAATC ATTCTCTGAAACTTTTCAATCTCCACTGTCACGTCCCCGTCGGTCAGTGC CCCCGGGATCAAGATTATTAGAAAAATAGAAATCTTAATTTTGTTGAAAG AGGACAGACTTTGTTAGAGTTAGCTTCActttttcgcgaattttcgctAG TACTGAAAAGTTtagattttaaagttttagactttaatgacacgtggttc atgcaatgtttacattttactaaagtctattcacgataagtgtgcactct tttttcttttacctataacttttgaaggaattcttcaatcgttataaatt tggtaccattggaaagatattagtgtgtgaaacaatttgaaataaaaaag tctttaaaaaaattcgaaaaatgaagatgaaaatgaagaagaaaaaaatg aagatcttgtagaaaagagCTATAACTAAAATTTTCACTGATGtaaatcc ttgatcatcgaacgtcatcactgtgaaaaaaattctcaaaaataatcatt cagtcaaaagatatcaaacaaagttataagctgattgacgtcgaaaaacg ctgttttctgcagttttttgatgtttttgggggtcaatcacttattaact ttgtatcataactttatatttaataaatattttaatgaaatttcttcaca gtgatgatctcctaagatcaaaaaatctctccagtgaaaatgaaagttat agcacttttctacaagatctccctttttttcttcttcattttcatcttca cttttagaatattttaaagatttttttatttcaaattgttccactcacta atatctttccaatgataccaaatttataaagattgaagaattccttcaaa aattatggtaaaagaaaaaagagtgcacacttatcgtgaatagacttgaG TTTTATGTTTCTTTAAATATCCTTCTATCCTGATCAGGTGAGGATTGCTG GGGTCGTTGTTATGGCAAAGGAGGAGCATGTCCACAATTCTGTGGTCGAA CTGGATTGTGTTGTCGTACTGGATGGAATGATCCCGGTTGCGAAAGAGCA TCAAAACCTTGCAACTATCATTGTTGTACAGCGCCTAAGAAAGAAGTAAA AAATGTTGGTAAGTATATTTTAAGTATTTAACAGACTATACTCCCCCTTC TCACAGAGCcgttaggattttttcagccagtgggggtacaAATAACGGTT TGGGtgcgatattttggccaatcggcAAAAGGGCTAAATTTgggaatttt gttttgttttgtttttgcgaTGCATTTTAAGATCAGCAATATTTTAAGCC ATTCGCAATGAATATTCGGAACTCGGTTTTGATTAAATTTGGGTAATATC TTTCGATTGAATatatgttggacggtgaaaaagaatgcggctattatatt ttgatttttcccgacatgtttcggtccgttctcaagggaataTATTTCGA TTGAATATAAATATTGTTAaataaagtctgtccagatataattggcagtg gaaacaagaatgcctgtaacttttgatagtcaaatataattatggaattt tttttgcttattttagagaatcaaaagcgctatatttgaatgtatttttg gttgaaaaattcgcgatttttagcggttaaatttgcgattgtaaaaattg tgctttttttctactcatgctataactttcatttttacaccagtggtaaa TCAGCCTCAGGTAAAGAAtgttgtcaaatttcaaagcaaatagaaaagtc cttcggaagatatgggacccgaaataccccttggtagcacttttctgtga aatataaAATCTCCAAcatattactaaaaacgggggtagtgataatATTG ATAAAACCTAGCTCTTCTcaggaaaaaattggaaagatattggcAGCCCT ATTTTCAGCGTCATTCTAggctttttactcaatttttcttgtttgatgaa gtttttttcagatttaatttcataaatgtattcgttaagctttcttgctt tcattttcaaagttgtatccggtaaatatacaaaaacaagaagttacagg actttttagaaataagattattaatcatttttcaaaatcagagaacttcg agccgccatgacagttgtcctttgcggacaaagctagatccTCGTATGTT TTCttaaacaatggaaagacaatagttcgctctccaccgttttatttgat gtttatccagagttctatgataaatccatggtgTCACAGACTCACTgcga ccccagccccactggaaaatttggcaaaaattttgtccccggtgggaaaa taccccaaaatttcagccccactggaaaaatggctttgatttcatttcca ttcgaaattcaatgtttaaaaattgtactccaaataccatccccattgaa ttttctaacctttaaacaatagaatttttatgccaattgggatttcaata ggaatctTTATTTCTGctgatgaaaaaagttccattggggctgtgagaca gaggtgtGATTTGGAAGCAATGTCGGTTGAGTCAAGGAACTTGATAGAAA GAACTTTAGCCACAAAACTCAGCAATTCTTTGCAATCATATGTTTACCAT AGGCAAGGATTGTTGGCACCATTGTTCAAACAAAGGAGGAAAATGCTCGT CAGGATATTGTGGAAAAGATGGTCTTTGCTGCAGGAGAGGGTGGAATGAT AGAGGCTGTGAAAAAGCAAAGGCTGCATGTGGATATCATTGCTGTACTGC TTAAAGAATCGAGTCTTGTAAATATTAATTATAAAACAAatatttattca tgatatgcaccattgcagtGGCTGATTgtttgcaagtgacgtattgactg attttacgtcatttacaaccaatcagctgtctaATTTGTGAATGAAAACA TAGCAATGATGCATATCGTGAATTGGTTTAAGTTTATGGGAATAATATAA TCATATGAATACAATTTTCAGTTattaactttctatttattaCCTCATTT ACTATccctaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021818XLOC_021818Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036936-exon-sc0001539-1491911889:36263..36472TCONS_00036936-exon-sc0001539-1491911889:36263..36472Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:36263..36472TCONS_00036936-exon-sc0001539-1510915933:36263..36472Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:36263..36472TCONS_00036936-exon-sc0001539-1575043694:36263..36472Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:37098..37214TCONS_00036936-exon-sc0001539-1491911889:37098..37214Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:37098..37214TCONS_00036936-exon-sc0001539-1510915933:37098..37214Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:37098..37214TCONS_00036936-exon-sc0001539-1575043694:37098..37214Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:37334..37448TCONS_00036936-exon-sc0001539-1491911889:37334..37448Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:37334..37448TCONS_00036936-exon-sc0001539-1510915933:37334..37448Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:37334..37448TCONS_00036936-exon-sc0001539-1575043694:37334..37448Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:37721..37824TCONS_00036936-exon-sc0001539-1491911889:37721..37824Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:37721..37824TCONS_00036936-exon-sc0001539-1510915933:37721..37824Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:37721..37824TCONS_00036936-exon-sc0001539-1575043694:37721..37824Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:38237..38311TCONS_00036936-exon-sc0001539-1491911889:38237..38311Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:38237..38311TCONS_00036936-exon-sc0001539-1510915933:38237..38311Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:38237..38311TCONS_00036936-exon-sc0001539-1575043694:38237..38311Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:38607..38688TCONS_00036936-exon-sc0001539-1491911889:38607..38688Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:38607..38688TCONS_00036936-exon-sc0001539-1510915933:38607..38688Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:38607..38688TCONS_00036936-exon-sc0001539-1575043694:38607..38688Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:40297..40496TCONS_00036936-exon-sc0001539-1491911889:40297..40496Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:40297..40496TCONS_00036936-exon-sc0001539-1510915933:40297..40496Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:40297..40496TCONS_00036936-exon-sc0001539-1575043694:40297..40496Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:41497..41541TCONS_00036936-exon-sc0001539-1491911889:41497..41541Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:41497..41541TCONS_00036936-exon-sc0001539-1510915933:41497..41541Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:41497..41541TCONS_00036936-exon-sc0001539-1575043694:41497..41541Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:43100..43270TCONS_00036936-exon-sc0001539-1491911889:43100..43270Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:43100..43270TCONS_00036936-exon-sc0001539-1510915933:43100..43270Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:43100..43270TCONS_00036936-exon-sc0001539-1575043694:43100..43270Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1491911889:44765..45174TCONS_00036936-exon-sc0001539-1491911889:44765..45174Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1510915933:44765..45174TCONS_00036936-exon-sc0001539-1510915933:44765..45174Clytia hemisphaericaexon
TCONS_00036936-exon-sc0001539-1575043694:44765..45174TCONS_00036936-exon-sc0001539-1575043694:44765..45174Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001539supercontigsc0001539:36263..45174 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.236169 0 0 0 0 0 0 0.0873049 0 0 0.104316 6.37504 6.72946 3.66506 8.09705 4.76073 5.36972 43.1503 49.0384 24.4613 24.2386 27.5568 26.344 41.4669 50.331 0 0 0 0
Blast
BLAST of TCONS_00036936 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 9.346e-32
Identity = 90/234 (38.46%), Postives = 122/234 (52.14%), Query Frame = 3
Query:  216 NYYEGDIKLSYKQLLFGSIRGK--RWTNGIVPYVVHSSLA-GVENVINDAIGVYHKKTCLKFVKRTNQRNYIEFFKETGCWSYVG-MSGGKQQLSLGTGCHWTATTQHEIGHAIGLQHEQTRPDRNQYVKIHLNN-LNNQKYAGNFHINSGVDSLGTPYDFYSMMHYGSTAFAKSGTKTITTLDRSKQRIIDNNYXTKTITTLDRSKQRIIDNNYHYGMSDIDAKQINLMYKCA 902
            + +EGDI+L   Q+   SI G+  RW + I PYV+  SL    + VI +A   Y  KTC+ F     + NYI  FK +GCWS VG    GKQ+LS+G  C   AT QHE  HA+G  HEQ+R DR+ YV+I  +  L+ +++  N + +   DSL  PYD+ S+MHY  TAF      TI T      RI D           D   QR+         SD D  ++N +Y C+
Sbjct:   47 DLFEGDIRLDRAQIR-NSIIGEKYRWPHTI-PYVLEDSLEMNAKGVILNAFERYRLKTCIDFKPWAGETNYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVT------RISDFE---------DVIGQRM-------DFSDSDLLKLNQLYNCS 256          
The following BLAST results are available for this feature:
BLAST of TCONS_00036936 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B9.346e-3238.46Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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