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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036920 ID=TCONS_00036920|Name=TCONS_00036920|organism=Clytia hemisphaerica|type=transcript|length=1277bp
CGCTTTGAAAGGTGAACAAGCTTAAGAATGAAGATTCTTGCATGTTTACT
GTTGCTCCTGTCCATCTATATGGTTAATGGAGACAACACCAGGGATATCA
AGACGTTGAAAAGCAGTCTCCAGCTCCTGTTAAAACGAATCGAATTAAAA
TCCTCTTATTGTTCTGCGCAAGCTCAAGGACAATGTGGCACGTGCATTTG
CAAAGACGATTTCAGTTTGAGAAAGAAGTATTACTGTGATTGCCGTAACC
AATCACCACAGCGCGATTGCCTTGCACATCGACAAAATGGGATGAAAATT
GACGGTTATTATACAGTCACAATGAATGGATCTCGTACGACTCAAGTTTA
TTGCGATCAAACAACTTCAGGAGGCGGTTTGACCGTCATTCAAAGACGTA
TGGATGGGTCCACAAATTTCTATAGAAGATGGAATACGTATAAggtaaat
tgtgaaaaactcTTCTTCCCTTTTTCGATTCTTTAAGAACTTTTCTGTTG
AAAATACTCTACCCAGCCCTTTTTAAGTTGTTTCTGCTTTTTAATCATGC
AAATACCCCTCATAGGTTTTTTGTAGACATTATTCATTGACTCTCATTCG
TGGCAGCTTTTATGATAGCGTGCatgattttaattttgttaaatACATCA
ATGAATTTTTAACATGACCTCAACCTTGTCAAAGGACCTTTGTTATTTCA
TATTCTTTGTTACATTTCTTTCAGGTTGGATTCGGTAAACTTCATCGTGA
ATTTTGGTTGGGCAATGAAAACATACATCTTTTGAGTCTACAAGCTGTTT
ATCCGAAAGGCTCAGAATTAATGATAAATATGAGGCTGCATGCTGGTAAT
TATTGGTACCGTTACAGTCATTTCCAGGTGGACAGTGAAAGAAGCCATTA
TCTTCTCCATGTTAGTGGAGCCTCTGGGAATCTCTCCCCTTCCTTGTTCG
TATCCTATCAAAACAAGGTTGAATTTTCAACATGGGATAAAGACCGAGAT
GGTTCGTCTTCTTATAATTGTGCTAGGGACTACCAATTCTCTGGTTGGTG
GATCAATGGGGCGGGCAATAAATGCACAGGTTACCAAGCAGCTGGTCCAT
ACGGCAAGTACCGTACTAGAACGTGGTACAAGAGGATCAATGCATACAGT
ATTATCATCCAACCTTTGTTGAGATGAAAGTACGTCGCTTGTAAAAATTA
TATTGATTTGTTTCATTACAAATTTTATTACAATAGAATCCAAACTATAA
GCTTAAATAATTTTGTACTTTATGGTT Run BLAST on NCBI transcript from alignment at sc0001535:51922..53198+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036920 ID=TCONS_00036920|Name=TCONS_00036920|organism=Clytia hemisphaerica|type=transcript|length=1277bp|location=Sequence derived from alignment at sc0001535:51922..53198+ (Clytia hemisphaerica)
CGCTTTGAAAGGTGAACAAGCTTAAGAATGAAGATTCTTGCATGTTTACT
GTTGCTCCTGTCCATCTATATGGTTAATGGAGACAACACCAGGGATATCA
AGACGTTGAAAAGCAGTCTCCAGCTCCTGTTAAAACGAATCGAATTAAAA
TCCTCTTATTGTTCTGCGCAAGCTCAAGGACAATGTGGCACGTGCATTTG
CAAAGACGATTTCAGTTTGAGAAAGAAGTATTACTGTGATTGCCGTAACC
AATCACCACAGCGCGATTGCCTTGCACATCGACAAAATGGGATGAAAATT
GACGGTTATTATACAGTCACAATGAATGGATCTCGTACGACTCAAGTTTA
TTGCGATCAAACAACTTCAGGAGGCGGTTTGACCGTCATTCAAAGACGTA
TGGATGGGTCCACAAATTTCTATAGAAGATGGAATACGTATAAggtaaat
tgtgaaaaactcTTCTTCCCTTTTTCGATTCTTTAAGAACTTTTCTGTTG
AAAATACTCTACCCAGCCCTTTTTAAGTTGTTTCTGCTTTTTAATCATGC
AAATACCCCTCATAGGTTTTTTGTAGACATTATTCATTGACTCTCATTCG
TGGCAGCTTTTATGATAGCGTGCatgattttaattttgttaaatACATCA
ATGAATTTTTAACATGACCTCAACCTTGTCAAAGGACCTTTGTTATTTCA
TATTCTTTGTTACATTTCTTTCAGGTTGGATTCGGTAAACTTCATCGTGA
ATTTTGGTTGGGCAATGAAAACATACATCTTTTGAGTCTACAAGCTGTTT
ATCCGAAAGGCTCAGAATTAATGATAAATATGAGGCTGCATGCTGGTAAT
TATTGGTACCGTTACAGTCATTTCCAGGTGGACAGTGAAAGAAGCCATTA
TCTTCTCCATGTTAGTGGAGCCTCTGGGAATCTCTCCCCTTCCTTGTTCG
TATCCTATCAAAACAAGGTTGAATTTTCAACATGGGATAAAGACCGAGAT
GGTTCGTCTTCTTATAATTGTGCTAGGGACTACCAATTCTCTGGTTGGTG
GATCAATGGGGCGGGCAATAAATGCACAGGTTACCAAGCAGCTGGTCCAT
ACGGCAAGTACCGTACTAGAACGTGGTACAAGAGGATCAATGCATACAGT
ATTATCATCCAACCTTTGTTGAGATGAAAGTACGTCGCTTGTAAAAATTA
TATTGATTTGTTTCATTACAAATTTTATTACAATAGAATCCAAACTATAA
GCTTAAATAATTTTGTACTTTATGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036920-exon-sc0001535-1491911889:51922..53198 | TCONS_00036920-exon-sc0001535-1491911889:51922..53198 | Clytia hemisphaerica | exon |
| TCONS_00036920-exon-sc0001535-1510915933:51922..53198 | TCONS_00036920-exon-sc0001535-1510915933:51922..53198 | Clytia hemisphaerica | exon |
| TCONS_00036920-exon-sc0001535-1575043694:51922..53198 | TCONS_00036920-exon-sc0001535-1575043694:51922..53198 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001535 | supercontig | sc0001535:51922..53198 + |
Blast
The following BLAST results are available for this feature:
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