TCONS_00036918 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036918
Unique NameTCONS_00036918
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5778

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036918 ID=TCONS_00036918|Name=TCONS_00036918|organism=Clytia hemisphaerica|type=transcript|length=5778bp
caaaaaaaaattttttgcggccggccgggtgagtgtttttttcgtcaccc
ggtggaccggaaacaaaaatatttttagggttcgcCTTATATACATATAA
GAAAAGGGCAATGGATTTGGGTTGATCATCATAATGATTAGCCAACATGC
ATATCCTTatatcctgaaaaaaaaattggaaaaagacaTTACATCAGGga
taaaaaggagaaaatggaaatttttcttACCTTGTCCAGGTATCATTGTA
TTTGCCTGTATTTCTCTGCAACAGTAAAACCAATATAATAAATAACATCA
TTCACCAGCAGAATATATATAATTGCATTTTTATATTGATGTTTGAATTC
ACAAAACACTTCACaacatatatttttatattgatGTTTGAATTCACAAA
CATTTCGCAACATGCAAATGCCCAGAAgtggtaattttgaaaaactaagc
TTTGGAAAACACGAAGTTTCACCTTTCTCGCCAGAGTTCCTTGGTTGTAA
TTACTTAGCTAAAATATCCAGTTTTTCGAGACTTTAGAAAACAGTGCTCT
TGACCACGCATTAGCGATATTCATTTTAAGAAAAGGCCGTGTGGGCCGCG
CAGTACCATGAAACTCCCGCTAGAAAAATGCGCACCAGACAGTCCTGTGT
AGTCCGGTGCGCACttttgaaaattactcaaaaaattACCGGACACAGGA
AAAACAACACCGGAATGTCCGGTgaatcggcagggtcgtctGGCATTATC
CTGCTTTCGTTGGACTTAAATTAAGTTTGATTGAATTATAAAGTTATACT
TTGTCACGGGTGTCAAAAGAATATGAGAGCTTATttatatcaaaaacaaa
acaacagtaTTTCCCAAGCTGATTTTTGGTCTCTTACTACTTACTTCCAC
TTACTACTGATGATGTCTCGTTTTAACTGCATGACTCACCTCACAGCGCC
ctgtttaaagggacataatagtagtgacgaaatttgtaaacaaaccgtat
gcagtgggatacaaatgtcacatgtcaaaataaaaattaaaaacaaatat
ggctgattttgattgtttcaattgttttacaagtttctTTTGGACacatg
attttaattgttctctttaatgacgcgtggtttgcgcaatgtttacattt
tactacttttatgtccatTTAATGGCCAGTAAGCAGTTATGCAAAAAAAG
TTAGAATTTCTAAGATGAtacttttgaaataaaaatgtaatGCCTTATTG
TGGTATGTTTCAACTTCTTgtgaattattattattataattatgGTTGAT
AAATTTAGCTAAGAGCCCCAAGAAGATTCAACTTCCAACTTTTCCATCAG
TAAACAGAAATCTAtccatttgagatttttcactTGTATTTAAAACTGTA
TCTTAAACTTTTTATACGATTTGTATTGGTCATCCCAATTAGCAAAGTGA
AATTCTAATAAAATAATGACTGATGAATTGTatgattttttaatatttaa
agcctactttgaattttttttattgtatgaATTTTTATTGTTATGGTGGA
AATATggcaaattaaaaaatttgtaataaaatctgAATGAAATAACTTTT
AGGGGCATTATTTATTACATTTTCCAACATTTTGATACTTATTTTTCCAT
AATTGTGAAAGATGTTGAACAGTTTTTCTATCAAGATTTAAAAAGGTATT
GCTCGTTGCAAGTAAGTAAAAATAGCTTAAACAAATTCTCTCTTAAACAT
TTTCTCCCatgtattatattttttatgtgtaaataatgttttaaaatata
tttttctgaattaTTACCATGGGATACAATAAATAGTACACATATACAAA
AACAGAATTatctttatcaaaaagtttataaGAGTTTAGCAAACTAATTT
tcttatttgttattttttggtgtgtaaactttttaaattataATCCAAAA
ACATGTCCGATATTGTTATggcaatcaaaattttaaaaagcaattaTTTA
TAACGTACTACtggatttttattttactgTACACTTCTTATTTATCACAT
TATACTCatattaaatgaaaaaaatatatacaaaatttatattttgaaat
cagATCTTATTGatgagaaaatctttgatttctaaatacaattttgcata
ttttacatttttaaagtATTAGTTTTATTATAGTGGAAGTTAAAAGTTGC
TTATTGAAAAGTCATTTTGAAAGTTAGAAGCAGTTATATAGTGTAAATAa
tccttttattttgattttactttgtaCTTGTGAGTTTGTTTTTACTAATA
TTTTGGTTATATGAAATGCATGTTCATCATGCTTCAATCCAAGGGTTTTT
GTACAGCTTGTTGATGGGTCTCTCAAGGTATGGTCTTAGATTTGATTGAG
TGATGTCATCCATCTTCAAGTGACCCTAAACAACAACCATGATGGTATAG
ATGTTCATCTATTGATCGATCGGTTTCATCCCCTATCCATGGTTTAACCT
TCTCCTAATCACCTCTGTCTTTCCGAACTGTAGAATATTGTCACAGTTTG
TATTCAAAGAAGATTTGATTCCTTCCAATCATCAATTGTTTGTACCTTGG
TGGTGTAACAAAATATCTCAACAAGATCTTCAGCCTTGAAGCTTGTTTGA
TGATACATTATGTCGTTAATTGGAGAAGATTGCCATTATTTCATCACATC
AACATGTACACGAGGAAACCAATGTTGCTTTCGTCACCAACCTGCTGCTA
AAACCACTGAACAATCATGTCCAGAATGGATACAAGGAAAATGTCTGAAT
CCAAACTGTAATCTCCGCCACATCGCTGTTGATCGCACAGGTCACCGAAA
TAAATTGACTCCTAAAGTATGTTTTTACGACAGCCAACCTACAGGATGTT
TGAATCCACTTTGTAAATTCGTACATACGAAAAAGAAAGCTGTTGAACCA
GTTGTTATTCCAAACGCAACACCTCTGGCAAAACCTGTTTTGGAAAATCC
TGTTGCACCTGTTAATCCTACTCCAGTTGTTGCTAAACCAGTCCAACCTA
CCCTTGCTGCTCCTACTATTGTCAAACAACCTGTTTCCCAAGTTGTACCA
AAACTTATTCCACCGCCAGCACCACTTCATACACTACAGCCTGCTATTCG
AACTCCAACTCTCATTAATGGAGTATTGAACATGGTCCCTGCAAGAGGCA
TCTTGGGAGCTAACCCCAATCAGGCACCTCAAATTCTCCCACCACTTGCT
ACACATCACGGATTGAGGCAACAAATTGCTGGTCAACCTTTAGTCAATAG
ACAACCTGTAATTGTCGGACAACCCGACAACAATAATGGTTTACCAAAGA
CTGgaCATTTCAACGAGCAAGTTCGACTTTTCAAAGAGATGTTGAGCTCA
AAAcagaaacaaaatcaaaatgATATCAAGCCAAATGCAAAGAACAACAG
AGACTATCACGGTGATAGCAGCGATTATGATTACGATTTagagaaagaag
aaagagaaaGAGATCGAGAGCGAAGAAACAAAGATAAATATCGAAAAAAG
AACAAGAAAGAACGACATGGTCGCCACAAGAAGAGATCAAAAGATGACCT
TAGTAAAGCAGACCAAGAAGTTTTATATGGTGATTACAAAGATGTCCCTC
TTGATCGAAGGCATAAGAAGGGTAGTAGAGAGTCTCGTCATGCAAGCAGC
GATTCTGATGTCAAAGttaaaagttatgaagaaatcTTACGCGAAAAAGC
TCTTCGTAAAATGatagagaaaaagaagaaagagaaaaactttgaagatg
ATTTCCAAGATATCCTTGAAGCAGAGGACTCTAAGAGTTCAAACAAAAAA
TCGAGTAGTGATGGTGAAGTCGTCAGTAAAGGCTCACGCAACCAGGATGT
TGATTTAGAAAGTGTTGTCTTTGATAAAGAGGACGCACTAGAGGTTGGTG
TTGACGAGGATGAGTTCGATGCCGAAGTTGATGACAAACGTCACTCAAAA
AGTAGACGGTCAAAAACAAGGAAGCGAAGCAGCGAAAAGGAAAATATAGA
AGATTCCTCTCTCAAATCATCAGCACCCTCTCCAACTTCTCAAGAAGTGA
AAACCAATATGAAAAGAGAAAGTGGAGATGAGGAACTAGACTACAATGAT
GATTTACCTGCTACTGAGGACGGTGTGCTTGTCATTCCTGATGAGACAAC
TGATTTAACATTCTCTGTTGATGTTACTGACGATTTAGCGCAAGAACTAA
ACTCTGAACCTGAGGAACGGTCTAAACACAAAaagaaaccaatcaaaata
gtgaaaaaaatACCGAGTGTTGCTAGCCGGATATCAAAACATACCAGTAA
TGATACAACGCGAGACCGTCGTCAGGAACGTTCGAAAAATAAAAGGACTA
TACAAGTTGTCGATGATGAATCTCCGGAtcataaaaaagagaaaagcgAA
CCTGGAAAAAAGACAGAAACCAAGAAAGTTATATCATTAGTAGGGAAAAA
AGGTACAGGCAAAAATGATAGTGCTTCTACTGAGGAAAAAGATGCACCTG
AGGTAGTGGAGgtagtaaaaataaaaacatttgaagAAATCATGGCTGAA
AAACGTAAACGTAAACTTCAAAAAGCTGACGTGGTTGTTGTTTCTGATAG
TGATTCTTTAGAGTCACCTGATAAGAAGCCCTTTAGTGACTCACCGTCCA
AAATGAAAGGACTTCCATCTATCGCCACTGTCTCCCAACCAGCACCACCT
CCGAAAACAGCTGCACAATTGCGCCGTGAAAAGCTTCAGTTGGCTAAACA
AGAATACGAAAAGAGGAGGAAATCTCAACAGTTGTATCAAGTCAAAAGCA
GCCAAGCGGCTACAACGAAACCACTTGATGTGAGAACGGCAAGTCCCGTT
AAAACACCAATTACTGCTCCTACATCAACAGAGACCAATGCTGCCAAGAC
CATCAAGTTAACACGACCAACAGTCACAGCACCCACCAAAGTTGCTAACG
CTCCTACCACTGAGAACGCAAGCGGGGTCTCTGTTCGCTCTTTTGAAGAA
ATcatgaaagaaaaaagtctaCGTAAACAACGTGAAATGCAGGGACAACA
AAACAAGGTCGAAGCTAAACCTATACAGAGTTTCCTACGACGTCGTTCTC
TATCCAATCAACGCAATCAAACACAACCTGGAATCACCACTTCAGTTAGT
AACGACAGTACCAAAAGCACTGAGAAAACTGTTCCAGCTACGACAGCCGT
GATTGCAGAAACCGAAACAGCAAAAGAAACTACGACAATGGTTCTACCGC
CGGTTGCGAAAATTATCGGTCGACGACGAAGCTCCTCACCACTTCAACCA
GGAGTCGAGGTCACTAAAGTTGCCCCCATCAAAATCAAACGAAAACTCTC
CTCATCGTCCAGCTCGGACCTGGCGAAATCAAGAACACAAACGCCTCCAC
CACAAGTTGTTCCTACAATACCCGCAAAATCTGACGACGTTTTCGATACA
CTGAAAGACGTCAGGGCAAACAACGAATCATCGACGAACGGAGCATCTCC
GATTGCGGAAGAGACAGAACCACTTTCACAAGCTTCAATGGAAGACATAC
AGGAAGCACTGTAAGTAAAACTTCTGTATAGTCCAGGGAAAGTGTGCATC
AATTGTGCGTTTTTgactagaaagcatgaaatttggtacagtggtacctc
agggggtaagaaacattttaagcctctgGCCCACTTCCGGAACAcctttt
tgtgtattttacagaccagaatgctTCC
Run BLAST on NCBI

transcript from alignment at sc0001535:35343..44273+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036918 ID=TCONS_00036918|Name=TCONS_00036918|organism=Clytia hemisphaerica|type=transcript|length=8931bp|location=Sequence derived from alignment at sc0001535:35343..44273+ (Clytia hemisphaerica)
caaaaaaaaattttttgcggccggccgggtgagtgtttttttcgtcaccc
ggtggaccggaaacaaaaatatttttagggttcgcCTTATATACATATAA
GAAAAGGGCAATGGATTTGGGTTGATCATCATAATGATTAGCCAACATGC
ATATCCTTatatcctgaaaaaaaaattggaaaaagacaTTACATCAGGga
taaaaaggagaaaatggaaatttttcttACCTTGTCCAGGTATCATTGTA
TTTGCCTGTATTTCTCTGCAACAGTAAAACCAATATAATAAATAACATCA
TTCACCAGCAGAATATATATAATTGCATTTTTATATTGATGTTTGAATTC
ACAAAACACTTCACaacatatatttttatattgatGTTTGAATTCACAAA
CATTTCGCAACATGCAAATGCCCAGAAgtggtaattttgaaaaactaagc
TTTGGAAAACACGAAGTTTCACCTTTCTCGCCAGAGTTCCTTGGTTGTAA
TTACTTAGCTAAAATATCCAGTTTTTCGAGACTTTAGAAAACAGTGCTCT
TGACCACGCATTAGCGATATTCATTTTAAGAAAAGGCCGTGTGGGCCGCG
CAGTACCATGAAACTCCCGCTAGAAAAATGCGCACCAGACAGTCCTGTGT
AGTCCGGTGCGCACttttgaaaattactcaaaaaattACCGGACACAGGA
AAAACAACACCGGAATGTCCGGTgaatcggcagggtcgtctGGCATTATC
CTGCTTTCGTTGGACTTAAATTAAGTTTGATTGAATTATAAAGTTATACT
TTGTCACGGGTGTCAAAAGAATATGAGAGCTTATttatatcaaaaacaaa
acaacagtaTTTCCCAAGCTGATTTTTGGTCTCTTACTACTTACTTCCAC
TTACTACTGATGATGTCTCGTTTTAACTGCATGACTCACCTCACAGCGCC
ctgtttaaagggacataatagtagtgacgaaatttgtaaacaaaccgtat
gcagtgggatacaaatgtcacatgtcaaaataaaaattaaaaacaaatat
ggctgattttgattgtttcaattgttttacaagtttctTTTGGACacatg
attttaattgttctctttaatgacgcgtggtttgcgcaatgtttacattt
tactacttttatgtccatTTAATGGCCAGTAAGCAGTTATGCAAAAAAAG
TTAGAATTTCTAAGATGAtacttttgaaataaaaatgtaatGCCTTATTG
TGGTATGTTTCAACTTCTTgtgaattattattattataattatgGTTGAT
AAATTTAGCTAAGAGCCCCAAGAAGATTCAACTTCCAACTTTTCCATCAG
TAAACAGAAATCTAtccatttgagatttttcactTGTATTTAAAACTGTA
TCTTAAACTTTTTATACGATTTGTATTGGTCATCCCAATTAGCAAAGTGA
AATTCTAATAAAATAATGACTGATGAATTGTatgattttttaatatttaa
agcctactttgaattttttttattgtatgaATTTTTATTGTTATGGTGGA
AATATggcaaattaaaaaatttgtaataaaatctgAATGAAATAACTTTT
AGGGGCATTATTTATTACATTTTCCAACATTTTGATACTTATTTTTCCAT
AATTGTGAAAGATGTTGAACAGTTTTTCTATCAAGATTTAAAAAGGTATT
GCTCGTTGCAAGTAAGTAAAAATAGCTTAAACAAATTCTCTCTTAAACAT
TTTCTCCCatgtattatattttttatgtgtaaataatgttttaaaatata
tttttctgaattaTTACCATGGGATACAATAAATAGTACACATATACAAA
AACAGAATTatctttatcaaaaagtttataaGAGTTTAGCAAACTAATTT
tcttatttgttattttttggtgtgtaaactttttaaattataATCCAAAA
ACATGTCCGATATTGTTATggcaatcaaaattttaaaaagcaattaTTTA
TAACGTACTACtggatttttattttactgTACACTTCTTATTTATCACAT
TATACTCatattaaatgaaaaaaatatatacaaaatttatattttgaaat
cagATCTTATTGatgagaaaatctttgatttctaaatacaattttgcata
ttttacatttttaaagtATTAGTTTTATTATAGTGGAAGTTAAAAGTTGC
TTATTGAAAAGTCATTTTGAAAGTTAGAAGCAGTTATATAGTGTAAATAa
tccttttattttgattttactttgtaCTTGTGAGTTTGTTTTTACTAATA
TTTTGGTTATATGAAATGCATGTTCATCATGCTTCAATCCAAGGGTTTTT
GTACAGCTTGTTGATGGGTCTCTCAAGGTATGGTCTTAGATTTGATTGAG
TGATGTCATCCATCTTCAAGTGACCCTAAACAACAACCATGATGGTATAG
ATGTTCATCTATTGATCGATCGGTTTCATCCCCTATCCATGGTTTAACCT
TCTCCTAATCACCTCTGTCTTTCCGAACTGTAGAATATTGTCACAGTTTG
TATTCAAAGAAGATTTGATTCCTTCCAATCATCAATTGTTTGTACCTTGG
TGGTGTAACAAAATATCTCAACAAGATCTTCAGCCTTGAAGCTTGTTTGA
TGATACATTATGTCGTTAATTGGAGAAGATTGCCATTATTTCATCACATC
AACATGTACACGAGTAAGCTAATTTTATAATTCAAGCATTataatacttt
aggcgtacaaactttcgcgagcagaaactttcgcaactTTTGCAAACCTT
TATTATATCTGTAAGATTTGGCCAACAACATATTTAAATGACATGATACA
TGCTTTGTGTCACCAAAAAATAATCAGAAACTTGATGAGCTAATAATGAT
ATTTATTTATCACTTTCCCAACTTTAGGGAAACCAATGTTGCTTTCGTCA
CCAACCTGCTGCTAAAACCACTGAACAATCATGTCCAGAATGGATACAAG
GAAAATGTCTGAATCCAAACTGTAATCTCCGCCACATCGCTGTTGATCGC
ACAGGTCACCGAAATAAATTGACTCCTAAAGTATGTTTTTACGACAGCCA
ACCTACAGGATGTTTGAATCCACTTTGTAAATTCGTACATACGAAAAAGA
AAGCTGTTGAACCAGTTGTTATTCCAAACGCAACACCTCTGGCAAAACCT
GTTTTGGAAAATCCTGTTGCACCTGTTAATCCTACTCCAGTTGTTGCTAA
ACCAGTCCAACCTACCCTTGCTGCTCCTACTATTGTCAAACAACCTGTTT
CCCAAGTTGTACCAAAACTTATTCCACCGCCAGCACCACTTCATACACTA
CAGCCTGCTATTCGAACTCCAACTCTCATTAATGGAGTATTGAACATGGT
CCCTGCAAGAGGCATCTTGGGAGCTAACCCCAATCAGGTATTTTTTCAAG
ATTCATGTTTTTTTTCCCACTAAAAGGTAATAAAGTGAATAAAAGATATA
TGTATTATCCCTTTTAAAAAAGGGATAACAAAGATTCATTTACTTTAGGT
TGCTACTTGCAATTATCTGAAGTTTGTGTAGGGACTACAAAATTCTAGTG
ATTTTTGTGAGATCTGTCTCTTCAAAATGTTTGTGTAATTGAAATCCATA
AGTGGATTGATTGAAAGACTTTcacccattcttgctcccgaaAACCCTCT
TTGTATATTTTCTAGCTTTTTGTCATATTCTTATCGTggttaaaactgat
ttttgcgtgTACCCTACGAAATGCATGTGATTTTTTGTGGAGAAATCTTT
CAAGTAGACCCAGGTAGACCTGCATTGTCAAAAGCAATGACTAGGACTTA
ATTTTGGGTGATAAAGCTGATTTGATTTTGAACATTTctcaaatatttat
ttattttcttatttatgaCATATTGCTTTTATTCAGGCACCTCAAATTCT
CCCACCACTTGCTACACATCACGGATTGAGGCAACAAATTGCTGGTCAAC
CTTTAGTCAATAGACAACCTGTAATTGTCGGTGAGTTGCTGTTATTGTCT
CTGAATGATCaaacataatttcaaaatcCTTAATGAATCTAGATTTGTTG
GCTTTTAGGTACCTTTTCCCATTAGTTTTTGCATACAATCATGTTGTACC
TTTCACTTCCATGCACCCTTTAATTTTTGTACACCCTCTATATGATATAA
AAACTTGCCCTATAGGGCCAAATTATTTTCTCCAAGTGCAAAATACATTT
CTCCCATTTTTTAGGACAACCCGACAACAATAATGGTTTACCAAAGACTG
GTGagagttttcttgattttttttctttttaaacgtccaaacaagaaatg
atacaactttagaaacattcagtaatataactttttttttttaaccaaGA
CTAACACCAATACTAACACCGTAACGGTTGTCCAAACAAGAAATGATACA
ACCATTGGTAATGgtaacaaaacaatttttttttttattattctgatttg
atttaattttttttttgcaggaCATTTCAACGAGCAAGTTCGACTTTTCA
AAGAGATGTTGAGCTCAAAAcagaaacaaaatcaaaatggtaTGCTTTCT
TTAAAATCATAGAAAATCTTTAAACTAATTCCTTCCATACACAATTTTGC
TGAAAAGCCTAATAGTATAATTTTTAGCCTTATTTATGAAATCCAATTTC
TTATCATAGATATCAAGCCAAATGCAAAGAACAACAGAGACTGTAAGAAA
TGAATCTTATTTTTAATTCACTTTCCTTGTTTTATTGGTCTCAAAATTAA
GCTTCTGGAATTGATTAATCAGTAAATAGTACATTGTTACCTTAAGGGGG
acaaatttttgcttttcacgcagttttttggcaaaacggcaaaaattaca
aatttggccatttttcatcaaaaaaattttaaaaatccctaggtaaatga
aagaaaatgtaTGCAAAATAGGGCAAAagagcgaaaattagttcctgcaa
aataaaatttttcgtttttttttcaaccgcAAAAATTATGtcccgctaaa
attagttccatTAAGGTATTCAACATAGACGTAAAATCTTTAACTCTTTT
TACTTGTTCATTTGTTGGGAAGTGGGTCTAGCAGGTTTTATATGATAATG
ATAATATCTTTCTTTAATGTTGGGGTAACGTAATTACAAATCAAGTAAAT
TTATTATAACTAATAAAATCCAACAATTTAGTaatttttatgttgaaaat
gcaataaattagcaaatttttcaatctttttttacaGATCACGGTGATAG
CAGCGATTATGATTACGATTTagagaaagaagaaagagaaaGAGATCGAG
AGCGAAGAAACAAAGATAAATATCGAAAAAAGAACAAGAAAGAACGACGT
ATGTTGAATTTTTATTCTCAGACTTTTATAGTTTACATTTACTAAGAGTT
TGATGCTCGTCCAAGTAATATAGAACAGTATAGAATAGTGTAATTTGGTC
CTTTAAAAAGTACCATAATGTGTAGAATCTGGATATTCCAACATATAGCC
CCCAAAATAATTTGTAACTCGACAACTGTTTGCTgaatttattgttattt
ttttgtacTTAGATGGTCGCCACAAGAAGAGATCAAAAGATGACCTTAGT
AAAGCAGACCAAGGTAAAATCCAGTGCAAATCACAGAAGGTTTTTCCCAT
AAGactaagaaatattttgtgctTTGTAAATTCTTTTGTAATGACAATTT
TGTAATGGACAAATGGTGAAGGCAAACACTTCacagaaaaactaaatttt
tacaaaaacaccgtttttgcatttttcaaattagTGTTAGGAAAATATCT
AGTCAACTCAATCTCATGCAAATTATTGGAACTACCTCGGGCTAGACCCC
TTCTAATTTGTAATTGGGGTTGCAATGGAGGGTGATTGATCTTGTTTCAT
TTTGTCTTTAGAAGTTTTATATGGTGATTACAAAGATGTCCCTCTTGATC
GAAGGCATAAGAAGGGTAGTAGAGAGTCTCGTCATGCAAGCAGCGATTCT
GATGTCAAAGttaaaagttatgaagaaatcTTACGCGAAAAAGCTCTTCG
TAAAATGatagagaaaaagaagaaagagaaaaactttgaagatgATTTCC
AAGATATCCTTGAAGCAGAGGACTCTAAGAGTTCAAACAAAAAATCGAGT
AGTGATGGTGAAGTCGTCAGTAAAGGCTCACGCAACCAGGATGTTGATTT
AGAAAGTGTTGTCTTTGATAAAGAGGACGCACTAGAGGTTGGTGTTGACG
AGGATGAGTTCGATGCCGAAGTTGATGACAAACGTCACTCAAAAAGTAGA
CGGTCAAAAACAAGGAAGCGAAGCAGCGAAAAGGAAAATATAGAAGATTC
CTCTCTCAAATCATCAGCACCCTCTCCAACTTCTCAAGAAGTGAAAACCA
ATATGAAAAGAGAAAGTGGAGATGAGGAACTAGACTACAATGATGATTTA
CCTGCTACTGAGGACGGTGTGCTTGTCATTCCTGATGAGACAACTGATTT
AACATTCTCTGTTGATGTTACTGACGATTTAGCGCAAGAACTAAACTCTG
AACCTGAGGAACGGTCTAAACACAAAaagaaaccaatcaaaatagtgaaa
aaaatACCGAGTGTTGCTAGCCGGATATCAAAACATACCAGTAATGATAC
AACGCGAGACCGTCGTCAGGAACGTTCGAAAAATAAAAGGACTATACAAG
TTGTCGATGATGAATCTCCGGAtcataaaaaagagaaaagcgAACCTGGA
AAAAAGACAGAAACCAAGAAAGTTATATCATTAGTAGGGAAAAAAGGTAC
AGGCAAAAATGATAGTGCTTCTACTGAGGAAAAAGATGCACCTGAGGTAG
TGGAGgtagtaaaaataaaaacatttgaagAAATCATGGCTGAAAAACGT
AAACGTAAACTTCAAAAAGCTGACGTGGTTGTTGTTTCTGATAGTGATTC
TTTAGAGTCACCTGATAAGAAGCCCTTTAGTGACTCACCGTCCAAAATGA
AAGGACTTCCATCTATCGCCACTGTCTCCCAACCAGCACCACCTCCGAAA
ACAGCTGCACAATTGCGCCGTGAAAAGCTTCAGTTGGCTAAACAAGAATA
CGAAAAGAGGAGGAAATCTCAACAGTTGTATCAAGTCAAAAGCAGCCAAG
GTACGTTctttataaacattttttatcgGAAAAGGTTTATGTTAGCCTTT
TTTCAGTTAGCTGAAATTCTGTCATTGTATATTTCACTCATGAAACTCTG
ACATGCAGGTTACATCTATTCTCGTGATTTGACCAAGTTCTCTCTGCATT
GTATGATTTCTTGAAATAGTGAACTCaaagaaattattttctcaTAATCA
TATACTTCCTTTAGCGGCTACAACGAAACCACTTGATGTGAGAACGGCAA
GTCCCGTTAAAACACCAATTACTGCTCCTACATCAACAGAGACCAATGCT
GCCAAGACCATCAAGGTTCGTATTTTATgagaaattcatgatatgcacca
ctgcaatggcttcacgaaattatgcaacaaAAATTATCCACccttccacc
caatacgtcacttgaaaaatgggtggaaaattttaaaagttctcagaaga
ctctccagtggtgcatgtCATGAATAAGTAATTCAAAGAACTGTGATTTC
GAATAATAGTCAAATTAAATTCTGAAATAACGCTGCCTCCTTAAGATTGT
TACCAATATAGTCCATAGTGATCCACAGTGTGTCCAGAAAAAGGCATGAA
CAGCATTTATACAAATAAAAATCCTCAGATCTTACATAAACTTGACCTAA
GGTTCTCGATCTCTTTTTCGAGATCCCAATTTAATATAATCTTGGGAATT
CAATGTTCAATATATTTATTGCACAACAAAGACATTATATCCATTCTAAC
CTCCAGTGGTTTAGTCAgttttatattatataaaatCTACCCCGCTTTAT
TTTGGGCACACTGTACATTTGCAAGCCATTGTTGAATAAGTTCCACTTCC
ACCTAAAGCAAAACCTTCTAAGGGCTTTCTAgctataaattttatttttc
atttctacaGTTAACACGACCAACAGTCACAGCACCCACCAAAGTTGCTA
ACGCTCCTACCACTGAGAACGCAAGCGGGGTCTCTGTTCGCTCTTTTGAA
GAAATcatgaaagaaaaaagtctaCGTAAACAACGTGAAATGCAGGGACA
ACAAAACAAGGTCGAAGCTAAACCTATACAGAGTTTCCTACGACGTCGTT
CTCTATCCAATCAACGCAATCAAACACAACCTGGAATCACCACTTCAGTT
AGTAACGACAGTACCAAAAGCACTGAGAAAACTGTTCCAGCTACGACAGC
CGTGATTGCAGAAACCGAAACAGCAAAAGAAACTACGACAATGGTTCTAC
CGCCGGTTGCGAAAATTATCGGTCGACGACGAAGCTCCTCACCACTTCAA
CCAGGAGTCGAGGTCACTAAAGTTGCCCCCATCAAAATCAAACGAAAACT
CTCCTCATCGTCCAGCTCGGACCTGGCGAAATCAAGAACACAAACGCCTC
CACCACAAGTTGTTCCTACAATACCCGCAAAATCTGACGACGTTTTCGAT
ACACTGAAAGACGTCAGGGCAAACAACGAATCATCGACGAACGGAGCATC
TCCGATTGCGGAAGAGACAGAACCACTTTCACAAGCTTCAATGGAAGACA
TACAGGAAGCACTGTAAGTAAAACTTCTGTATAGTCCAGGGAAAGTGTGC
ATCAATTGTGCGTTTTTgactagaaagcatgaaatttggtacagtggtac
ctcagggggtaagaaacattttaagcctctgGCCCACTTCCGGAACAcct
ttttgtgtattttacagaccagaatgctTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021806XLOC_021806Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036918-exon-sc0001535-1491911889:35343..38055TCONS_00036918-exon-sc0001535-1491911889:35343..38055Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:35343..38055TCONS_00036918-exon-sc0001535-1510915933:35343..38055Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:35343..38055TCONS_00036918-exon-sc0001535-1575043694:35343..38055Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:38270..38779TCONS_00036918-exon-sc0001535-1491911889:38270..38779Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:38270..38779TCONS_00036918-exon-sc0001535-1510915933:38270..38779Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:38270..38779TCONS_00036918-exon-sc0001535-1575043694:38270..38779Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:39279..39372TCONS_00036918-exon-sc0001535-1491911889:39279..39372Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:39279..39372TCONS_00036918-exon-sc0001535-1510915933:39279..39372Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:39279..39372TCONS_00036918-exon-sc0001535-1575043694:39279..39372Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:39607..39642TCONS_00036918-exon-sc0001535-1491911889:39607..39642Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:39607..39642TCONS_00036918-exon-sc0001535-1510915933:39607..39642Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:39607..39642TCONS_00036918-exon-sc0001535-1575043694:39607..39642Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:39863..39931TCONS_00036918-exon-sc0001535-1491911889:39863..39931Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:39863..39931TCONS_00036918-exon-sc0001535-1510915933:39863..39931Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:39863..39931TCONS_00036918-exon-sc0001535-1575043694:39863..39931Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:40052..40084TCONS_00036918-exon-sc0001535-1491911889:40052..40084Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:40052..40084TCONS_00036918-exon-sc0001535-1510915933:40052..40084Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:40052..40084TCONS_00036918-exon-sc0001535-1575043694:40052..40084Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:40630..40740TCONS_00036918-exon-sc0001535-1491911889:40630..40740Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:40630..40740TCONS_00036918-exon-sc0001535-1510915933:40630..40740Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:40630..40740TCONS_00036918-exon-sc0001535-1575043694:40630..40740Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:40955..41005TCONS_00036918-exon-sc0001535-1491911889:40955..41005Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:40955..41005TCONS_00036918-exon-sc0001535-1510915933:40955..41005Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:40955..41005TCONS_00036918-exon-sc0001535-1575043694:40955..41005Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:41304..42542TCONS_00036918-exon-sc0001535-1491911889:41304..42542Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:41304..42542TCONS_00036918-exon-sc0001535-1510915933:41304..42542Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:41304..42542TCONS_00036918-exon-sc0001535-1575043694:41304..42542Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:42757..42857TCONS_00036918-exon-sc0001535-1491911889:42757..42857Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:42757..42857TCONS_00036918-exon-sc0001535-1510915933:42757..42857Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:42757..42857TCONS_00036918-exon-sc0001535-1575043694:42757..42857Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1491911889:43453..44273TCONS_00036918-exon-sc0001535-1491911889:43453..44273Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1510915933:43453..44273TCONS_00036918-exon-sc0001535-1510915933:43453..44273Clytia hemisphaericaexon
TCONS_00036918-exon-sc0001535-1575043694:43453..44273TCONS_00036918-exon-sc0001535-1575043694:43453..44273Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001535supercontigsc0001535:35343..44273 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.391461	0.331991	0.336684	0.437663	4.69834	3.63123	3.06102	3.75604	2.17334	2.43263	3.75035	2.44744	1.65013	2.32012	0.797168	1.0177	0.963906	0.885723	1.21261	1.67264	2.15545	2.04958	0.490506	0.79433	1.96857	2.38789	2.31424	2.97533	1.98759	1.84194
Blast
[Close]
BLAST of TCONS_00036918 vs. Swiss-Prot (Human)
Match: ZC11A (Zinc finger CCCH domain-containing protein 11A OS=Homo sapiens GN=ZC3H11A PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 4.556e-17
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 2 
Query: 2672 GEDCHYFITSTCTRGNQCCFRHQPAAKTTEQSCPEWIQGKCLNPNCNLRHIAVDRTGHRNKLTPKVCFYDSQPTGCLNPLCKFVHTKKKAVEPVVIP 2962
            GEDC++F  STCT+G+ C FRH  AA   E  C  W +G+C    C  RH+ +D+     K +   C++++QPTGC    C F H + + V+ + +P
Sbjct:    5 GEDCYFFFYSTCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDK-----KRSEIPCYWENQPTGCQKLNCAFHHNRGRYVDGLFLP 96
The following BLAST results are available for this feature:
BLAST of TCONS_00036918 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZC11A4.556e-1738.14Zinc finger CCCH domain-containing protein 11A OS=... [more]
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