TCONS_00036902 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036902
Unique NameTCONS_00036902
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2294

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036902 ID=TCONS_00036902|Name=TCONS_00036902|organism=Clytia hemisphaerica|type=transcript|length=2294bp
TCAGGGAAAGACGGATTCTGGGAAGAATTTGAGCAATTACAACAACAAGA
ATATAAACACAAATACACCAAGAAGGTCGGTTTGACGTCATATAACAAAC
ATAAAAATGTCTTCAGGAACATCGTACCTTTTGATCACACGAGGGTGGTT
TTGACAGATGGTGACCCTGATGATCCGAAACAAGACTACATCAATGCTTC
TTATATCGACGGTGAGTTTTCTCACGAATACATTGCAACCCAAGCGTGTT
TAGAGGAAACGATAGTCGACTTTTGGCGGATGGTATACAGCGAAAATACG
CATGTTATTTTGATGGGAATGAAATTGATCGAGAAAGGAAAAAAAAGATG
TGCTCAATACTGGCCAGATTGTGACCACTCCATGAAAGTTGGTCAATTCG
ATATCGCTTGTAATAAAGAAACGGAGACCCAAGAATTTGTCCTCAGAGAG
TTCGAACTCAGAAATAATGACGAGcCTGAGAAGGGAACGCGGACGGTGTA
TCACTATCAATTCATTGCATGGCCAGAACATGGTCTACCAGAGAACGTCG
GCTCCATCCTTGGCATTCTGCACGATATCAATCTCAAACAAAAGGATTAT
GATTATCCAATCGTTGTCCAGTGCAGcaATGGCATCGGAAGGACTGCAAC
ATTCATCATTATCGATATGCTTTTGAAAATCGTCCAACGAAAAACGCTAG
ATTGTGAGATAGACGTTCAAAAGACGGTACAACATGTACGTACACAACGA
GCTAACATGGTGCAATTAGAGGGTCAATACACTTTCATTTACCTTGCATT
GGCTCATTACATCGAAATGGAAAATTTCAATCCTCACGTCACATCACCAC
CCAAACCAAACGTACCTACCCAACCGATTGCACCTGCTATTCCAGAGCGA
CCACCTCCTCGTAATAAAAATTTAACatcaaacaaaaacaatattCCACA
CAGACCACCTCCCGCTATTCCATCCAACAATCAGCACCATCCAAACAACT
ATCAAAAGACGCCCAACGGGGGCGGTCCTGATATCCCTCCAACGCCGCCA
CCAAGGAACCCTTCCAAACCGAACGGTCCACCAAGTTTGCTGGGAATGAG
ACTTGTACAAGATCTACCAGAATCGCCAGCTCCAGGGACCCCTCCCGCTC
GGCCGCCACCAAGAGGAATGAAACCATGATGTTGAGAATCAGAGTTACAT
GATTTTACGTTCAGGGTTTGTGATTCGAAAATCATCTTTTCCAATCAGTG
AGAAGAAAGGTAACGCTCTGTTTGGCAGATTACTCTCGTGTTTGACCTCC
CTTTTGATGGCTTGCAATTACCGGTCATGAATACTTTTAAATGCATTGAT
GCTTTCCATGCTGGATTTGATTTAATATTAAATAACCATGGATTTAAACC
AAAGACTCGACATTTAAAATCGATGATCCAATCGATTTACATCGATGGAC
CGTCAGACATTATACAGCACGTTAaatgttttcattaaaatcgaattaaa
tgttttctttctttgaaatcaaaattaatgtcttctaattttttggaaat
aattgtttttacttgaaatttctTCGATATAATTTTTGTACATGATGTTG
TTATTTTGTTACTTgacaacacccctgtctcgttgATTCAGTGAATTGAA
TGGGTTTTCCCTGGCTTTTTAAGGCTAATTGTTTTAGTAAAAAAATCCAC
TCAAACAATGAGTATCTGAAACAGGGgtgtttcaaaaatattgattattt
ttttatgatttttgcaattttcttaTCCGAAACTAATTTTTCACAATCAT
GATAAAACAAGTCATTACTTCGAATTCTCTCCTTCACTTCTCTCGATTta
ctttaaagatattttccgttgagtttaaagcccgaatagctagagaggaa
tctttaacctttttcAATATTTGTGGCGCATTCAGGATAACGGATTGAAT
TTAGCGCTCATATTGTTTTACGCGGCAGTTTTTCAAAATCCGGTGATAGA
TTTATCTTTCAATCCGGCTTATGTCGGAAAACCAAGGCAAGCTGGCTGcg
cattttgaaaataattggcCTCGTTTTCGATGCAagagattcctctctag
cccttTGGGATTTAAACTCAATGGAGGAAAGAGGAATCATGTATCCcttc
aagtttttttattgtttcaaggATAGATcgtcattttatttggtttactT
TTTTTGGGActagatggagtttttacaagctcttatttgaatTGGTTGAt
ggttaaccagtaataaaacaatgttgttacgttttctaaagaac
Run BLAST on NCBI

transcript from alignment at sc0001534:35215..45633-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036902 ID=TCONS_00036902|Name=TCONS_00036902|organism=Clytia hemisphaerica|type=transcript|length=10419bp|location=Sequence derived from alignment at sc0001534:35215..45633- (Clytia hemisphaerica)
TCAGGGAAAGACGGATTCTGGGAAGAATTTGAGGTAATGATACATATCTT
AAAGGGAAGAGAGAAATTTTCTCTCTCGCTGTTTCTCTCTCTTGCAGTAA
TTTTTATTTTCTGATTTGAAGTCAGTTTCTATGGTTCGTACAAAATTGTG
TAAGAGTTTGTGTCCATCATGTCATATTTGCGAACTTTCTCTTCTCTATC
GAAGATCCTGCTAAAATGGATCTAAGATTATATTATAACCAAGTTTGAAT
TTCGGGTTTTTGAGATTCCAGTTTGGCCGTTTTTACCGAAATGTTTTTTG
GACCTACCCCGGTGGGATTGAGGTCCTATAAATTAACCTGCGTGTTCGTT
CATTCATCCGTTCGTTCGTCTGTTACCAACTTTTCTCAGGATTGAATCAT
AGGAATCTTTTGATTTTTGGTACAAAGGTGCAAAATGGTGGTGGCCAAAA
TGTGACGGAGCCCGATTTACGAGAAAAAATTCTTTTGGACAAATTTGGGC
CAAAAAACGGCTAAAAAACAGGTTTTTTGAACTTTGTCAAAAATTGGATC
ATTAATTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAA
AAGATTTTGTTGGCGCAAAAAACGCATTTTTATCTATAAGAATCACTATT
AATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTTGTTATAAG
ATAGATGTTTTTTTTGCTCATGAGGGCTTACTTTTGAAGAATATGTGTTT
AGACATGAAATTTTGGTTGCTGGGCGTGTTTTTATAGAAAAACTGGCCAA
ATTCGACATTTTTTTTATAAGAACATTATAAATTACTTAGGTATTAGCTT
TTCTCGAGATTGGCTCTTTCATTCTTTATGATTTTTTGCACAAAGATGCA
TAACTATAAACCCTCAAATGTGACTCAGTCACACGTTTTTTGAAAAAAAA
GTTTTGAGGTAAATTTCAGCTAAAAAACGACTAAAAANTTGTGTTCTGAA
TGATTGTTTAATGGTCACACTCACGTAGATATCAATTATATATGTGTTAA
ATGCATAACCAGGTAGGTCCATAAAAGTATCACTTGTTTCTTCTTACAGC
AATTACAACAACAAGAATATAAACACAAATACACCAAGAAGGTCGGTTTG
ACGTCATATAACAAACATAAAAATGTCTTCAGGAACATCGTACCTTGTAA
GTAACCTACACTTATCAGTGAAAACCAACCCTGTAGCCTTGGAAGTTATA
CGACGAAAGTTGGTTAATTAGACGAAAGTTTTGTTAATTAGACAAAATCG
ACCTATGCTTGAGTATTTTTGTCACGATTCATACAAATATCTTCTCACCT
GCATTGGACTGTACTAAAAATTTTGGACTAACCATTGCCCACTCTTTGAA
AAGTTTTTTCAAAAATTTGACTCACATGATGCGATGTCTCACATCGAGTA
GTGGAACCATTATAGCGATACTCACTTTTTTTTAACTCCGATCAGATTTA
AATTATCTGCAGTTGTGATTGTCCAGAGTTTCTGAAAAGGAACCCTCTGT
CTAGTGTAGACTAGATTCTAAATGACTTAGGTTAGGACTTCGAGTTTGTT
GAAATCTCCTGACTTAAAAGGATAGATACATAAAACTTGCTAAAGTAGTT
CGTTTATGGCACTAGATCCTAGATTTATTGATCTTTTGAAGCAGCTAGTA
ATTTGTCAAGTAACTTTTTTCATCGTTTTTGTAGTTGATCACACGAGGGT
GGTTTTGACAGATGGTGACCCTGATGATCCGAAACAAGACTACATCAATG
CTTCTTATATCGACGTGAGTATCGCTCATCGTTCTAATTATTTTCAAGTG
ATTTGTGAGAAAGTCGCTAAGAGAAGTCTTAAAAATCTTTTCGTCATATT
TTTTCTCGTTCTTTTGAAAATATTTGAATTCCTCAAGGGAAATAACCTTG
ATAAGAAGTGCTCTCGGTAGATTTTGAGAAAACTTGAAAAAATTTTATAT
TAAATTTAAGTCGTTGTATTATCTTGTTGGTACTATATATGGGACTTCGC
CAAAATTAGCTGTCCTAAAACAAAGTTACACTTGCGCTTACACTATGATG
ACAATAAAATTACAATTGCAATTGCTATTTTCAATCACACGTCAATTCTA
TGTTTTCATCTTTCAGGGTGAGTTTTCTCACGAATACATTGCAACCCAAG
CGTGTTTAGAGGAAACGATAGTCGACTTTTGGCGGATGGTATACAGCGAA
AATACGCATGTTATTTTGATGGGAATGAAATTGATCGAGAAAGGAAAAGT
ATGGCTGATTTGTTGTTGAGCATTTTTACGCCTTGAAGAGTCTTGAGGTC
AGGGGTCAAGCTGGAGTTTTTACAAGTTCTTTGATGACTCTGTTGGTCGT
TAAATGTTGAGACAAACGATTTTATTACTTTTTCTAAAGAACGCCTCATC
CCGTCATAACCAATCAGTTAAGCATCTTGTAAAAACTCAAAGGCATCTCG
AGAACAGAAGTAGCTAAAAAACAGCTCTTTCACATGCGCATTTGAAGGAG
GCATCCTCATTAATTATAAACATCTGTTAACAATTGTACCCTCGGTTTCA
ATCCAAAAGCAAAATACGATTTAGCAAAGTTCAATATTCGGTCAATTCCG
TATAAATTAAGAAAGAAGTTCATTTAATATCATCTTCCTTGTAGAAAAGA
TGTGCTCAATACTGGCCAGATTGTGACCACTCCATGAAAGTTGGTCAATT
CGATATCGCTTGTAATAAAGAAACGGAGACCCAAGAATTTGTCCTCAGAG
AGTTCGAACTCAGAAATAATGACGAGGTAAATGAGCGTAAAGCTTTAGCA
TGTATAACCACTTTTAGAGACAAGATGTTGTAAATGATACGTATGGGTGT
AAGTCTAGTAACTCGCGAAGCTTCATTTAAGAATCTCACAAAAACACTTC
TGCTTCTGAAACCTCAGCCAGGGTCTCATAGTCATAGTATAATCCTTTAT
CAGCCTAGGGTAGCCCTGGCTCAGAGTCCCAAGCCACCTAAATATTCATG
CTTTCAAAATTTTCACTAAAGCTCTTCATTAAGGAGTGCTTTTCGGATTT
TAGACTTTAGACCATGTTTCGGAGCAAAAAAAAACGTTGCAGTCCCGTTA
TCCAATGAAAATAATGGAGCGAAACCATTTCGATATGTTTTGCTCTGTAA
CGTCTTCTTTTTTGACGTTTTCAATTTTGACGTTCACGCAGCTTTCGAAG
ACCCCTATCAGTAATTTGCGTTTCCCTCTCACTTTTCTTTTGTCAGCCTG
AGAAGGGAACGCGGACGGTGTATCACTATNTGCTTTTTCCTCTCACTTTT
CTTTTGTCAGCCTGAGAAGGGAACGCGGACGGTGTATCACTATCAATTCA
TTGCATGGCCAGAACATGGTCTACCAGAGAACGTCGGCTCCATCCTTGGC
ATTCTGCACGATATCAATCTCAAACAAAAGGATTATGATTATCCAATCGT
TGTCCAGTGCAGGTGCGTATTCTTTTGTTGAAGTCTATTAGGGGAAAAAG
AAGAATGAGCAAAGACCTTTCCATCCTTTTCGGTTTGATATTCGAGGGGC
GAGAATTTTTATTCAAATTTGAAGAAATTTTGTTTTATAGAGAAGATTTT
AAATCATTCTTGTTATTTCGATAAAAAAATCAAACAGAACATCCTCAATT
CAGACATATACGAGTTTTCAAGAATTTTTTGCATGCCACCACCTCGATTT
TGAGAAGTGGTATTTCATCCATGGACTAAAAATCTTTTGGAACATTTTGA
AATAGTGGCCACCCTATTTTGGTCTTCTAGGGACCTTTTTTTTCTCAAAA
ATACAAAATTTCGCAACATAATCATTTGTCATTGTCATTTGAATCCTTCA
ATTGAACAAGTTTGAGCCCTACTTGTTGAATTCTCCACTCCACGTTACTA
AAAGTCATGATGTCTGAAATTTTAGTATTGACCCCTATTATAATAATGCT
TTGATGTTTGTTTACAATTTCTTTTGTTTATTTTAGCAATGGCATCGGAA
GGACTGCAACATTCATCATTATCGATATGCTTTTGAAAATCGTCCAACGA
AAAAGTAAGTTACAAAAACATTTTTACTATCATTATTACCCGAAGCTCAA
AAATCCCTCAAAGTTACTTTTGACCGAATCTTTTTATTATCTTTTTATCT
TTTTACATTAACGTACAAATCAATTAGGCTGAAATCTCTTTTTTATTAAG
ATGATCTTGTAGGCAAAACTCAGTATTGATTCCTATCGCGCCTTGTTTTT
ATTGCTTTTATTATGACTACAAGTCGAGGAAAACAACCCTAACTGTTGCT
GATTGTTGGTAACAAACTTTCCTTTTCTTTCCAGCGCTAGATTGTGAGAT
AGACGTTCAAAAGACGGTACAACATGTACGTACACAACGAGCTAACATGG
TGCAATTAGAGGTATCTTTCATTTGTAGTTTTCTCTAGCTTGTTCGTCTG
ATGATTCTTTTCGCTATTCTTTCCATTCGAAAACTGATATTTTAGAACCT
TGATGAGCTATTCTGACACCGATGGTTCCCTTTATGGATTTAACTTTTAC
TATCCGATTTGTACTAAACAATTATAGAAAATTAAGCAATTTTTAACAAA
TGTGTCTTTACGTGCAGGGTCAATACACTTTCATTTACCTTGCATTGGCT
CATTACATCGAAATGGAAAATTTCAATCCTCACGTCACATCACCACCCAA
ACCAAACGTACCTACCCAACCGGTAAGCTCTTTTGGAGAGCATTTCTCTA
CCTTAAGGGAACTAATTTTAGCGGGAACTAATTTTCGTGGTCAAAAAAAA
TTCTAAAAAATCGGAACAGCGAAAATTAATTTGGGATTAAGCTATTTTGC
CCTATTTTGGACACATTTCTTTCATTTTCCTAAATGAAAAATGATGAAAA
TGGCTAATTTTGTAATTAGCATTTTCTCATTTCCGTGGTTTTGCCAAAAA
ACCGCGAAAAAAGCGAAAATTAGTTCCCTCTGGGTACTATGTCTTCCTTT
GACGTAAAAGGCGACAGAAAGTCAACGGAAATGATCCTTGCTTGGAAATT
TTGAAAGAAGTTATTTCATTGATATCATGAGAAGGCATCGCATTGACTTT
GCTGTGATGAACTTTAAGTTAGACAATGCTGAAATCCTCTTGAATTGTCT
AAATTAGAGATAAGGTGTATAAGTTTTTGTAAAGTAATAATTCTTTTTAA
TTCGAAACTCCACTCCTCAAACATTTGCGAGCTAAGCGATAGTCAGCTTG
AAAAGTCTTATAAGGGTCCCTTGCATTATGAAGAACGGATGAGAAAAAGT
CTTTGATATTTAAACCTGTAAATCAGAATGAACGAAATTACATCTTAGAA
AACAACAAATTTGTAATTTGGTCATTTTGATGTTGGCATCTTGTTGAATT
GTAATGCGGCCGTGACAAACCTTTTTAAACACCATTTCCTTTCCTTTAGA
TTGCACCTGCTATTCCAGAGCGACCACCTCCTCGTAATAAAAATTTAACA
TCAAACAAAAACAATATTCCACACAGGTAATTCTATGAAATTGTTTGTCT
TTTGAATGTCTCAATCTATGTAGGTAGCTTTTTGGACCTTCCTCCGGGTG
CCCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTCCGTCCGTTCGTCC
GTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTT
CTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATGTGACGGA
ACCCGATTTTCGAAAAAAAATATATTTGGGCAAATTTGGGCCAAAAACTA
CCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTT
TTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAATGTGACG
GAACCCGATTTTCGAAAAAAAATATATTTGGGCAAATTTGGGCCAAAAAC
TACCTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCATTACTT
TTTTCTGATTTTTTGTACAAAGATAGAGGGCAAGATTCTTTAAAGAATGG
CTGAAGTCTTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAGACGGATTT
TCGTATTTTAGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTCTTC
TCAATGTTGACTCATAGTCATAATTTTTTTCTGATTTTTTGCACAATGAT
GCAAAATGACAATGCCCAAAATGTGACGTAGCCAGATTTTTAAGGAAAAT
TTTTTTGGGCAAATTTGGGATAAAAACAGCTTAAAAGGTTTTTTGGGTCT
GAATGGTTTAAGTGATTTTCGTATTTGGGGACATTCCTTTTTACCATTTT
ACATTATTCAACACACAAGCTTTATTTTTCCATTCTGAATTTTTGTACAA
TTATTGTCACTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGT
CCATTCAGCATGTTGCTTGTTTCTTTTCTTTTTTTCATGTCATTTCTCGT
TTCTCATCAAGCTATTTCTACATGCTGTTCACGCCCTTCTACTTTTATAG
ACCACCTCCCGCTATTCCATCCAACAATCAGCACCATCCAAACAACTATC
AAAAGACGCCCAACGGGGGCGGTCCTGATATCCCTCCAACGCCGCCACCA
AGGAACCCTTCCAAACCGAACGGTCCACCAAGTTTGCTGGGAATGAGACT
TGTACAAGATGTAAGGAGCTCTTCTTTGTCTAACTACCCGGTCCAGTAAC
GTTTGGACATTTCAATATTAAGTTTTATAAACTATGACGTGTTAAAATGG
TAGCCGGAGCTATAAAATTATTACTAAACAGCTCCATTACTTAGTTTCCA
TTTGTCAGAAGAAATCGTTCTTTTTTAATTAAAGTTCTTTGTCTTTTATA
GCTACCAGAATCGCCAGCTCCAGGGACCCCTCCCGCTCGGCCGCCACCAA
GAGGAATGAAACCATGATGTTGAGAATCAGAGTTACATGATTTTACGTTC
AGGGTTTGTGATTCGAAAATCATCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTTCTTTTCTTTTTTTCATGTCATTTCTCGTTTCTCATCAAGCT
ATTTCTACATGCTGTTCACGCCCTTCTACTTTTATAGACCACCTCCCGCT
ATTCCATCCAACAATCAGCACCATCCAAACAACTATCAAAAGACGCCCAA
CGGGGGCGGTCCTGATATCCCTCCAACGCCGCCACCAAGGAACCCTTCCA
AACCGAACGGTCCACCAAGTTTGCTGGGAATGAGACTTGTACAAGATGTA
AGGAGCTCTTCTTTGTCTAACTACCCGGTCCAGTAACGTTTGGACATTTC
AATATTAAGTTTTATAAACTATGACGTGTTAAAATGGTAGCCGGAGCTAT
AAAATTATTACTAAACAGCTCCATTACTTAGTTTCCATTTGTCAGAAGAA
ATCGTTCTTTTTTAATTAAAGTTCTTTGTCTTTTATAGCTACCAGAATCG
CCAGCTCCAGGGACCCCTCCCGCTCGGCCGCCACCAAGAGGAATGAAACC
ATGATGTTGAGAATCAGAGTTACATGATTTTACGTTCAGGGTTTGTGATT
CGAAAATCATCTTTTCCAATCAGTGAGAAGAAAGGTAACGCTCTGTTTGG
CAGATTACTCTCGTGTTTGACCTCCCTTTTGATGGCTTGCAATTACCGGT
CATGAATACTTTTAAATGCATTGATGCTTTCCATGCTGGATTTGATTTAA
TATTAAATAACCATGGATTTAAACCAAAGACTCGACATTTAAAATCGATG
ATCCAATCGATTTACATCGATGGACCGTCAGACATTATACAGCACGTTAA
ATGTTTTCATTAAAATCGAATTAAATGTTTTCTTTCTTTGAAATCAAAAT
TAATGTCTTCTAATTTTTTGGAAATAATTGTTTTTACTTGAAATTTCTTC
GATATAATTTTTGTACATGATGTTGTTATTTTGTTACTTGACAACACCCC
TGTCTCGTTGATTCAGTGAATTGAATGGGTTTTCCCTGGCTTTTTAAGGC
TAATTGTTTTAGTAAAAAAATCCACTCAAACAATGAGTATCTGAAACAGG
GGTGTTTCAAAAATATTGATTATTTTTTTATGATTTTTGCAATTTTCTTA
TCCGAAACTAATTTTTCACAATCATGATAAAACAAGTCATTACTTCGAAT
TCTCTCCTTCACTTCTCTCGATTTACTTTAAAGATATTTTCCGTTGAGTT
TAAAGCCCGAATAGCTAGAGAGGAATCTTTAACCTTTTTCAATATTTGTG
GCGCATTCAGGATAACGGATTGAATTTAGCGCTCATATTGTTTTACGCGG
CAGTTTTTCAAAATCCGGTGATAGATTTATCTTTCAATCCGGCTTATGTC
GGAAAACCAAGGCAAGCTGGCTGCGCATTTTGAAAATAATTGGCCTCGTT
TTCGATGCAAGAGATTCCTCTCTAGCCCTTTGGGATTTAAACTCAATGGA
GGAAAGAGGAATCATGTATCCCTTCAAGTTTTTTTATTGTTTCAAGGATA
GATCGTCATTTTATTTGGTTTACTTTTTTTGGGACTAGATGGAGTTTTTA
CAAGCTCTTATTTGAATTGGTTGATGGTTAACCAGTAATAAAACAATGTT
GTTACGTTTTCTAAAGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021800XLOC_021800Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036902-exon-sc0001534-1575043694:45601..45633TCONS_00036902-exon-sc0001534-1575043694:45601..45633Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:44438..44534TCONS_00036902-exon-sc0001534-1575043694:44438..44534Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:43820..43899TCONS_00036902-exon-sc0001534-1575043694:43820..43899Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:43336..43467TCONS_00036902-exon-sc0001534-1575043694:43336..43467Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:42808..42939TCONS_00036902-exon-sc0001534-1575043694:42808..42939Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:42122..42273TCONS_00036902-exon-sc0001534-1575043694:42122..42273Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:41530..41597TCONS_00036902-exon-sc0001534-1575043694:41530..41597Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:41173..41249TCONS_00036902-exon-sc0001534-1575043694:41173..41249Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:40862..40966TCONS_00036902-exon-sc0001534-1575043694:40862..40966Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:40058..40134TCONS_00036902-exon-sc0001534-1575043694:40058..40134Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:36587..36746TCONS_00036902-exon-sc0001534-1575043694:36587..36746Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1575043694:35215..36395TCONS_00036902-exon-sc0001534-1575043694:35215..36395Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:45601..45633TCONS_00036902-exon-sc0001534-1510915933:45601..45633Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:44438..44534TCONS_00036902-exon-sc0001534-1510915933:44438..44534Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:43820..43899TCONS_00036902-exon-sc0001534-1510915933:43820..43899Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:43336..43467TCONS_00036902-exon-sc0001534-1510915933:43336..43467Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:42808..42939TCONS_00036902-exon-sc0001534-1510915933:42808..42939Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:42122..42273TCONS_00036902-exon-sc0001534-1510915933:42122..42273Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:41530..41597TCONS_00036902-exon-sc0001534-1510915933:41530..41597Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:41173..41249TCONS_00036902-exon-sc0001534-1510915933:41173..41249Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:40862..40966TCONS_00036902-exon-sc0001534-1510915933:40862..40966Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:40058..40134TCONS_00036902-exon-sc0001534-1510915933:40058..40134Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:36587..36746TCONS_00036902-exon-sc0001534-1510915933:36587..36746Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1510915933:35215..36395TCONS_00036902-exon-sc0001534-1510915933:35215..36395Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:45601..45633TCONS_00036902-exon-sc0001534-1491911889:45601..45633Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:44438..44534TCONS_00036902-exon-sc0001534-1491911889:44438..44534Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:43820..43899TCONS_00036902-exon-sc0001534-1491911889:43820..43899Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:43336..43467TCONS_00036902-exon-sc0001534-1491911889:43336..43467Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:42808..42939TCONS_00036902-exon-sc0001534-1491911889:42808..42939Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:42122..42273TCONS_00036902-exon-sc0001534-1491911889:42122..42273Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:41530..41597TCONS_00036902-exon-sc0001534-1491911889:41530..41597Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:41173..41249TCONS_00036902-exon-sc0001534-1491911889:41173..41249Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:40862..40966TCONS_00036902-exon-sc0001534-1491911889:40862..40966Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:40058..40134TCONS_00036902-exon-sc0001534-1491911889:40058..40134Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:36587..36746TCONS_00036902-exon-sc0001534-1491911889:36587..36746Clytia hemisphaericaexon
TCONS_00036902-exon-sc0001534-1491911889:35215..36395TCONS_00036902-exon-sc0001534-1491911889:35215..36395Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001534supercontigsc0001534:35215..45633 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.408333	0.000354448	0	5.24404e-07	0.838008	2.73004	3.77031	0.000165588	0.0917561	1.16509e-07	0	7.35074e-06	0.00174464	4.07421e-08	0.000232128	0.00868146	0	1.05939e-09	0.00448099	0.680909	0	0	0.130127	0.000674449	0.234165	0.128139	0.968766	5.24653e-05	3.55427e-05	7.52851e-06
Blast
[Close]
BLAST of TCONS_00036902 vs. Swiss-Prot (Human)
Match: PTN6 (Tyrosine-protein phosphatase non-receptor type 6 OS=Homo sapiens GN=PTPN6 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 5.268e-71
Identity = 125/280 (44.64%), Postives = 180/280 (64.29%), Query Frame = 1 
Query:    1 SGKDGFWXXXXXXXXXXYKHKYTKKVGLTSYNKHKNVFRNIVPFDHTRVVLTDGDPDDPKQDYINASYIDGEF------SHEYIATQACLEETIVDFWRMVYSENTHVILMGMKLIEKGKKRCAQYWPDCDHSMKVGQFDIACNKETETQEFVLREFELRNNDEPEKGTRTVYHYQFIAWPEHGLPENVGSILGILHDINLKQKDYDY--PIVVQCSNGIGRTATFIIIDMLLKIVQRKTLDCEIDVQKTVQHVRTQRANMVQLEGQYTFIYLALAHYIE 816
            + K GFWEEFE LQ+QE K+ + +  G    NK KN ++NI+PFDH+RV+L   D + P  DYINA+YI  +       +  YIA+Q CLE T+ DFW+M + EN+ VI+M  + +EKG+ +C  YWP+       G + +    E +T E+ LR  ++   D  +   R ++HYQ+++WP+HG+P   G +L  L  IN +Q+   +  PI+V CS GIGRT T I+IDML++ +  K LDC+ID+QKT+Q VR QR+ MVQ E QY FIY+A+A +IE
Sbjct:  239 TAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGMQRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDL-IREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGRTGTIIVIDMLMENISTKGLDCDIDIQKTIQMVRAQRSGMVQTEAQYKFIYVAIAQFIE 517
The following BLAST results are available for this feature:
BLAST of TCONS_00036902 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTN65.268e-7144.64Tyrosine-protein phosphatase non-receptor type 6 O... [more]
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