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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036888 ID=TCONS_00036888|Name=TCONS_00036888|organism=Clytia hemisphaerica|type=transcript|length=593bp
CAAATCTGTACTTGGTAGGCTGGAAGCTCCGAACAGGCATAatgaacaaa
tctttgacaCTTCCTACACTGCAAGACATCGTTATCCCGtattatttcat
ttaaaaagCATTCATTTGGGGTGCAGGatccatattttgatgaaatttcc
gtgttaagattttcagaagttttcgccattttgttgcaTTGTGTGAAATG
GAGTGAACCTTTGGAGGGTTTGTAAGAAGAACAGAAAAACGAAAAATGCC
AACTAAAGAAGAAATGATGGATTTCATGAAGAAAAATGGTGAAGATGAAG
GGTTGTATGGAAAATTCAAGATCCGGATTAACAACGAAAGAAACgcaata
aaaaaagaagctaATAAGGAACAGACAGAAATCGATAAACGAGTTGCTAA
ACGAGCAAAAGAAATGGAAATGTAATTTTGATGGGACTTACTAGTTGATT
GCTTGCAAGTTTATAAATGGAAATTTTGCATATTGACAGTTGTTAcagat
ttgtttttgtttcttctttaaaacattaaaatttcGAGACTTGGTCATCA
AAGAAATGTTGGAAAACTAATCTTGGGTTCCAAATAAATGCCN Run BLAST on NCBI transcript from alignment at sc0001531:32586..33922+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036888 ID=TCONS_00036888|Name=TCONS_00036888|organism=Clytia hemisphaerica|type=transcript|length=1337bp|location=Sequence derived from alignment at sc0001531:32586..33922+ (Clytia hemisphaerica)
CAAATCTGTACTTGGTAGGCTGGAAGCTCCGAACAGGCATAatgaacaaa
tctttgacaCTTCCTACACTGCAAGACATCGTTATCCCGtattatttcat
ttaaaaagCATTCATTTGGGGTGCAGGatccatattttgatgaaatttcc
gtgttaagattttcagaagttttcgccattttgttgcaTTGTGTGAAATG
GAGTGAACCTTTGGAGGGTTTGTAAGAAGAACAGAAAAACGAAAAATGCC
AAGTAAGTTCTTTTTCTTTACTtgatacaaaatataaaatacaaaaataa
agttaaaataaGCTGAAATAAGGCTATTTAGTAGAGCAAAATAAAGCTTG
GTACTCACGTATTTGAAAAAGTGGCGTTTAACACTAGTCGCGGGCGTTTA
ACTTTTCAGATCATCTATGTACTCACTAGGATTTCTCTGCTGGGAGCTTT
TCAGCAAAGAGAGATAGAAAAAGTGaaacgaaatcgaaagtaaaaatcta
aaattacaaaagaattgaaaaaaattaatcttgtttaCATTGCGGTGCCT
TTGAACCTTAGTCGCAcgtatgaaaattttttgatatgtgcgtttaactt
ttttttcattaagtACGAACGTTTAGCATTAAACGCAGGCGTTTAACACA
AAACGCCCGCAACTAATGAGTGTACTCACTAGGACATTTTTTTCTTAGTC
GCGTGCGTTCGCGCGGCGCGTCTATTGTTAAATTCACGCGACTAGTGTTA
AACGCCACTTTTTCAAATGCTTGAGTACCAAacttttgacagctgaaaat
attcttaaaaattaataaacggggggatcTCAAAGTccaggggttggaaa
attttcgaaaaatgaacaTTAGATTTGTTTATCATTAAAAATGCAGCACT
TTCGAATTACGATGGAGAACTTTTACTGTTGGCTTACTCCGGTTTGAATA
TAATTGCTTCGATTTAAGTTGCAAACAATGATTTAACTTTCTTTAGCTAA
AGAAGAAATGATGGATTTCATGAAGAAAAATGGTGAAGATGAAGGGTTGT
ATGGAAAATTCAAGATCCGGATTAACAACGAAAGAAACgcaataaaaaaa
gaagctaATAAGGAACAGACAGAAATCGATAAACGAGTTGCTAAACGAGC
AAAAGAAATGGAAATGTAATTTTGATGGGACTTACTAGTTGATTGCTTGC
AAGTTTATAAATGGAAATTTTGCATATTGACAGTTGTTAcagatttgttt
ttgtttcttctttaaaacattaaaatttcGAGACTTGGTCATCAAAGAAA
TGTTGGAAAACTAATCTTGGGTTCCAAATAAATGCCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036888-exon-sc0001531-1491911889:32586..32837 | TCONS_00036888-exon-sc0001531-1491911889:32586..32837 | Clytia hemisphaerica | exon |
| TCONS_00036888-exon-sc0001531-1510915933:32586..32837 | TCONS_00036888-exon-sc0001531-1510915933:32586..32837 | Clytia hemisphaerica | exon |
| TCONS_00036888-exon-sc0001531-1575043694:32586..32837 | TCONS_00036888-exon-sc0001531-1575043694:32586..32837 | Clytia hemisphaerica | exon |
| TCONS_00036888-exon-sc0001531-1491911889:33582..33922 | TCONS_00036888-exon-sc0001531-1491911889:33582..33922 | Clytia hemisphaerica | exon |
| TCONS_00036888-exon-sc0001531-1510915933:33582..33922 | TCONS_00036888-exon-sc0001531-1510915933:33582..33922 | Clytia hemisphaerica | exon |
| TCONS_00036888-exon-sc0001531-1575043694:33582..33922 | TCONS_00036888-exon-sc0001531-1575043694:33582..33922 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001531 | supercontig | sc0001531:32586..33922 + |
Blast
The following BLAST results are available for this feature:
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