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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036880 ID=TCONS_00036880|Name=TCONS_00036880|organism=Clytia hemisphaerica|type=transcript|length=1084bp
TATGACCTTGCTTTTTCAAGCCCTAGGAGAAAGGCCTGTTTCTATGTTTA
GAGTTTcagtttcttaattttttttgctattttttaaaaacaatctaTCT
AAAGAATTTATCAGGATGATTTTATTCCCatagggaccattcaaaaagta
cgtacgctcgagagGGAGGAGGGGGGTAATCCCAAAAGCATATGAAAGCG
TACATGGGGGAgggggtccttgaggagaagtacgtacgctcgtaatGTTT
CCTAAATGTCTTTCTTGAGAGAAAACtgcaatattttcacatcaaaaaat
tgtttttgcaattgatatttttcatttctcctttggtatttttgttcatc
ttatagattcttttaatttcttgagactttgttataaatatgaTTGGATA
CCTACTTATTCTAATGTTACAAGAGTTTCAAGTTTCGACTTTGGTTAGGG
GGTTGTActaaaaagcgtacgtacgctgaagggggggggtacacataaag
cgtacaaggggtgagggggagtcaaaaatttgccattttcgagcgtacat
actttttgaatggtccaaTATAGAATATCCAAGTATTAGTTCTCTTATAG
gtgtactttttattttatttcatttaaaattttttgtttNAATGTTACAA
GAGTTTCAAGTTTCGACTTTGGTTAGGGGGTTGTActaaaaagcgtacgt
acgctgaaGGGGGGGTACACATAAAGCGTACAAAAGCGTACAATCGGTGA
Gggggagtcaaaaatttgccattttcgagcgtacatactttttgaatggt
ccaaTATAGAATATCCAAGTATTAGTTCTCTTATAggtgtactttttatt
ttatttcatttaaaatttttttgtttaagacAAATATTTTACATCGAGGT
AAGCCTTAACATATTCCTGTGAAGGTATTTTTGATGGGTCTTCAATTATT
TGTGTAAACTTCAATTTCGTATCCAAGTCCAAGTAGTCTTCTGGTGTTTC
AAGAATCCCAGACAATTCAGCTACCTCTTGGAGTTGCTCTGGTTTGATTT
GAAAgcctataagaaaaatgaaaatgtgacTGTC Run BLAST on NCBI transcript from alignment at sc0001528:52537..53620 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036880 ID=TCONS_00036880|Name=TCONS_00036880|organism=Clytia hemisphaerica|type=transcript|length=1084bp|location=Sequence derived from alignment at sc0001528:52537..53620 (Clytia hemisphaerica)
GACAgtcacattttcatttttcttataggcTTTCAAATCAAACCAGAGCA
ACTCCAAGAGGTAGCTGAATTGTCTGGGATTCTTGAAACACCAGAAGACT
ACTTGGACTTGGATACGAAATTGAAGTTTACACAAATAATTGAAGACCCA
TCAAAAATACCTTCACAGGAATATGTTAAGGCTTACCTCGATGTAAAATA
TTTgtcttaaacaaaaaaattttaaatgaaataaaataaaaagtacaccT
ATAAGAGAACTAATACTTGGATATTCTATAttggaccattcaaaaagtat
gtacgctcgaaaatggcaaatttttgactccccCTCACCGATTGTACGCT
TTTGTACGCTTTATGTGTACCCCCCCttcagcgtacgtacgctttttagT
ACAACCCCCTAACCAAAGTCGAAACTTGAAACTCTTGTAACATTNaaaca
aaaaattttaaatgaaataaaataaaaagtacacCTATAAGAGAACTAAT
ACTTGGATATTCTATAttggaccattcaaaaagtatgtacgctcgaaaat
ggcaaatttttgactccccctcaccccttgtacgctttatgtgtaccccc
ccccttcagcgtacgtacgctttttagTACAACCCCCTAACCAAAGTCGA
AACTTGAAACTCTTGTAACATTAGAATAAGTAGGTATCCAAtcatattta
taacaaagtctcaagaaattaaaagaatctataagatgaacaaaaatacc
aaaggagaaatgaaaaatatcaattgcaaaaacaattttttgatgtgaaa
atattgcaGTTTTCTCTCAAGAAAGACATTTAGGAAACattacgagcgta
cgtacttctcctcaaggacccccTCCCCCATGTACGCTTTCATATGCTTT
TGGGATTACCCCCCTCCTCCctctcgagcgtacgtactttttgaatggtc
cctatGGGAATAAAATCATCCTGATAAATTCTTTAGAtagattgttttta
aaaaatagcaaaaaaaattaagaaactgAAACTCTAAACATAGAAACAGG
CCTTTCTCCTAGGGCTTGAAAAAGCAAGGTCATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036880-exon-sc0001528-1491911889:52537..53620 | TCONS_00036880-exon-sc0001528-1491911889:52537..53620 | Clytia hemisphaerica | exon |
| TCONS_00036880-exon-sc0001528-1510915933:52537..53620 | TCONS_00036880-exon-sc0001528-1510915933:52537..53620 | Clytia hemisphaerica | exon |
| TCONS_00036880-exon-sc0001528-1575043694:52537..53620 | TCONS_00036880-exon-sc0001528-1575043694:52537..53620 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001528 | supercontig | sc0001528:52537..53620 . |
Blast
The following BLAST results are available for this feature:
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