TCONS_00036864 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036864
Unique NameTCONS_00036864
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2109

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036864 ID=TCONS_00036864|Name=TCONS_00036864|organism=Clytia hemisphaerica|type=transcript|length=2109bp
TAGGGTCACATTCGACATAATTGGAAGTCAAGATGGTTCATTTTGTATTC
AAGTAGATTGGATTACTTCAAATCTAAAGGCGACTTGGTGCCCAAAGGGT
CGATTCGATTGAAAGGTTGCTCAGTAATATGTCCTGATCCAGAATATGTC
AAGAAAGAGTGTGTATTCCGCTTGATTGAGATCTACGGAACAGAGTACCT
CTTGCAATGTGCCAACGAAGAAGAAAGGACAAGTTGGGTGGATTGCATCA
GTCAGGCTGTTCGCAAACttgaaagtatttcaaaatcgTCCCTAAAGATT
TCTGATCGACCAGATTTGGGATCGCCACCTGTAGAggacaaaacattttc
aaacgaTTCCTTAGTTGTCCTGCAAAATCGTGTCACCCATGAAGATTTGT
TATCAGCAATGCAAGACCCTGAAGCTGGGATCACCTTGACCAATCACACC
GTTGGTGCAGAACATTTCAAAATGTGCTTCTCGGGAGAGGACTTGATCTC
ATGGCTATTATCCTGGGCGTTCGTTCAATCTCGTGAAGAAGGGCGTATCG
TGGCGGGTCAGCTCTTGGAGAAAGCCTTCCTGCATCCTGTCGGAcctgaa
ttagaaaaaagttttaaaaggaCCGCCTCAAGAATGGCGTTTGGGGATGG
TTCATCTAATCTTTATCGCTTTTCTTTGTTGCATACCAACAGTTCACTGG
ATGTGGATTTCGATCTGTCTGATTCTTCTGATGATTCGGACGATGACGGG
GTTTTGGATAACTTCCAAGGAAAGATTATCAAGCAAGGATTTCTTGTTAA
AAAGGGTCAAGTGCGACATAATTGGAAAGTGCGGAAGTTTGTTTTGTACG
ATGAACCAATGAAACTTGTCTACTACAGCCCCACCAAGTCAGAGAAGAAA
GGACGCATCAAATTATTCGGAAGTGAAGTCAACGTTTtgaatgaagaaga
agatgaagatgcTACTTGCGCCAAAGgaGCGAAACGAATAGTTAGGGAAC
ACTGCCTCGTCTTACGGACGAAGAAGAATACGAAATATATTCTTCAAGCG
CCTTCTCTCGAAGAAATGAGGGTTTGGGTTCGGACTCTTGAAGGGCTTTT
CGATAAATACAAAACTTGAAGGGTTGCTCGATAAATACAAAACATGATGT
TGCTTCGGGAGTTGGCTATGCACATACAACGACCGGTGTTATCTATTCTG
TTAATTTGAATGGACGAATTTTCTCACCTACCTCCCCCCTCCGGAGTATA
TAGAACATGCATCATGTTGCCAATGGTCTTTGAACGCTCTCATCTCCCTT
ATCCTAATTCCCATTGTTCCCATGAAAGGTATTCTTCTCATAGTAAAGCC
TTCTTACATATCCAAGTACATTCCTTCTCTCCACCCACAACTCCATTGTA
GTCTGTTGTAGTAGAGCTAAATACAGCTTGTCTATTTCCAACCTTTAATA
GATACTCTTAGAAGCTCTTAGTGAGAAGGCTCTCACTTTTTGGAATTGTA
ATTTAAATGCTTTAATATATTTCTATTGTTAGACATAGGTCTTGAGATAT
TtattaatatatattttttatattctgACACATATacttttttaccaaat
tttataTGCAAAAGCGATAattgttttctaattttttataatttttatga
ttGGGAAATTCACAGATTGTCAACCGAGACAATCAATGTAAGTAACTGTA
TCTCATGTCATCATTTTCTAATCAGCACGAAGGTATAGCTCATTTGGGCC
ATTTTTGGAATGCCTATCAGGCTAGGTTTTGTCTTTCTACGCTAGTTATT
GTCGTAATTAACGATAGAACTCGTAAAATCATTTTACCTTAAggtaactt
tttttggtgagaactaattttagcgcattacacgttttttttttttatta
gaacacctaaaatttggctgagcctggatgtgcttattttttttagcaat
tttcagcctaaaatgttcttaaatgcgttcttaatttttcggactacttt
aaatcgacaacatcatgcaaaataaagaNAAaacatcatgcaaaataaag
agcacttaaagttggtaaaatttggacaatatttgactctcgattttaga
aaatccatc
Run BLAST on NCBI

transcript from alignment at sc0001526:22784..36037+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036864 ID=TCONS_00036864|Name=TCONS_00036864|organism=Clytia hemisphaerica|type=transcript|length=13254bp|location=Sequence derived from alignment at sc0001526:22784..36037+ (Clytia hemisphaerica)
TAGGGTCACATTCGACATAATTGGAAGTCAAGATGGTTCATTTTGTATTC
AAGTAGATTGGATTACTTCAAATCTAAAGGCGTAAGTTCACCCGTATCTC
AAGAGTGtcccaaaaaaatcatttctttatTCTACTCAGGTCCAGCATTT
GGTAATTGATTTAGTCGTTTTTAATAGTCATCCATAGTCATGCTTTCTAT
AAAAAGTTCTGATGGCTGacaatttcttttaatttggaGGAGAGTAGGAA
AAGTTTGTTTAAACTTGAATTTTCATAATCTTTTCTCACAATTTTTAGCT
CGAAAATTCTAGATCTATCTTAAGTAGAATCTTGTATTTCTCTTATTTGA
ATGGTGCCTCTCTTTAAAATCGTGCTCAAGTCAATGAATAAAATTATATT
TagatcaattttggttagtgtTAGTAGCTTTTGCCAACTTTCTTTAGCTA
CTTTTCTGGTTTTCCGGTTTCTATCAGGTGAGACAACTGTTTTTTAAAGA
TGCTCCATGTGATGGAACATTTGATAGTTAAACCAAGAGGGGCATCTATT
TGCAGTTCTCGAATCTTCATGTTCATTAAAAACAGTCATCAGCAATTTTT
CTGTTTACTTTATTAGTAAcaaaacattttcctttttgtGTAATTTAGAT
ACATTCATTCTTGTTTAGGACTTGGTGCCCAAAGGGTCGATTCGATTGAA
AGGTTGCTCAGTAATATGTCCTGATCCAGAATATGTCAAGAAAGAGGTTT
GTTAATTACATCTCATCATTTATTTACCTCAGGTCAAGAACGCTGTTCGA
AGATAAAATTGTAAACCTATTTAAATGTGTGCTAAGTACCTTCATTAATA
AATTCATTTTAAGgttatctttatttttccaataaagaatgattttcaaa
aagttgaataGTAGACAGTTGAAAGTCCAGGTTCTTAGGTTGCTTTGACA
GGAAAAATAACATCATATGTCACGGAATTGACTTTATAGTGTGTATTCCG
CTTGATTGAGATCTACGGAACAGAGTACCTCTTGCAATGTGCCAACGAAG
AAGAAAGGACAAGTTGGGTGGATTGCATCAGTCAGGCTGTTCGCAAACtt
gaaagtatttcaaaatcgTCCCTAAAGGTAAGATGAATGAGTTTCACTAA
TTTCAAAAGGACTGTCAAAGAGGCTTTTCGGGTCAAGATAAAAGCTTGTC
TTAAATTTGGAGAGTATTGTGATAAGAAAGGATGCCATTTCTCTAATGAT
CCTTAGTCCTATTTCTGCTTTTAGATTTCTGATCGACCAGATTTGGGATC
GCCACCTGTAGAggacaaaacattttcaaacgaGTCCTTAGTTGTCCTGC
AAAATCGTGTCACCCATGAGTAAGTGACCTTCTTAAATTCTTGGTATGAT
AGTCAGCTGCTGGGCTACATTGGCAAGTTCACTACATATCCTGTCACTCT
TTTGAATGGGACTTGAATAGTCTGATTCACAAATAtatttcagttttcaa
agttGCTCCGTCTCAGATAGATTTCTGTCTCATTGAAATATCAAGAGACT
GTCGGTTTCAAATTGATGAGCTTTGGCTAACCTTTTCATTTGTCCTTGTA
CGAACAAACACGAACAAActgaggaaaattttctattttacccttggaaa
gtcaaattttgaagttctttattgaaaaaaacaGATTGTACCATTTGATA
GAACTTGAAGAGTAAATGGATCNAGGGCATCTATTTGCAGTTCTCGAATC
TTCATGTTCATTAAAAACAGTCATCAGCAATTTTTCTGTTTACTTTATTA
GTAAcaaaacattttcctttttgtGTAATTTAGATACATTCATTCTTGTT
TAGGACTTGGTGCCCAAAGGGTCGATTCGATTGAAAGGTTGCTCAGTAAT
ATGTCCTGATCCAGAATATGTCAAGAAAGAGGTTTGTTAATTACATCTCA
TCATTTATTTACCTCAGGTCAAGAACGCTGTTCGAAGATAAAATTGTAAA
CCTATTTAAATGTGTGCTAAGTACCTTCATTAATAAATTCATTTTAAGgt
tatctttatttttccaataaagaatgattttcaaaaagttgaataGTAGA
CAGTTGAAAGTCCAGGTTCTTAGGTTGCTTTGACAGGAAAAATAACATCA
TATGTCACGGAATTGACTTTATAGTGTGTATTCCGCTTGATTGAGATCTA
CGGAACAGAGTACCTCTTGCAATGTGCCAACGAAGAAGAAAGGACAAGTT
GGGTGGATTGCATCAGTCAGGCTGTTCGCAAACttgaaagtatttcaaaa
tcgTCCCTAAAGGTAAGATGAATGAGTTTCACTAATTTCAAAAGGACTGT
CAAAGAGGCTTTTCGGGTCAAGATAAAAGCTTGTCTTAAATTTGGAGAGT
ATTGTGATAAGAAAGGATGCCATTTCTCTAATGACCCTTAGTCCTATTTC
TGCTTTTAGATTTCTGATCGACCAGATTTGGGATCGCCACCTGTAGAgga
caaaacattttcaaacgaTTCCTTAGTTGTCCTGCAAAATCGTGTCACCC
ATGAGTAAGTGACCTTCTTAAATTCTTGGTATGATAGTCAGCTGCTGGGC
TACATTGGCAAGTTCACTACATTATCCTGTCACTCTTTTGAATGGGACTT
GAATAGTCTGATTCACAAATAtatttcagttttcaaagttGCTCCGTCTC
AGATAGATTTCTGTCTCATCGAAATATCAAGAGACTGTCGGTTTCAAATT
GATGAGCTTTGGCTAACCTTTTCATTTGTCCTTGTACGAACAAACACGAA
CAAActgaggaaaattttctattttacccttggaaagtcaaattttgaag
ttctttattgaaaaaaacaGATTGTACCATTTGATAGAACTTGAAGAGTA
AATGGATCATTTGTCTCAATTGGTTAACTAGGTCCCCCGGAAATGGACGA
AACGTGAAAAGTTTTATGTTGacatcagcatttttgagaaaattgttgac
aaaaaaaattacttttaacaGACGCATCTTGAAGAGCATATCAATTAGAA
GTATAGATTGTAGGGCTTCCGTGGCTTAATCTTGAGATGTTTGAGTTTtg
aattttgctgactcagcctTTTTCAGCGCTTTTATATTACCAAATATTCA
GTTAAAGGATAATTTGCCTTCGCGTGATTCGAGAATGAGAAATTATGGTG
ACCTAGTTTAAAGTGGCTCAGGAAGGAAAATCGGCGAAAAGATATATATA
TTGAGCTTTTTACACTTACGGTGTTATCAATGTTAGatgattcaataaaa
aaaaagtctaaattGTATTTAAAGGTCtcaaatctgaaaataaaaaaaaa
ttaattggtAAGATGAACAAAGAACAAAcaattaaaaatcatcaaatcat
CCTATTTTTGAACTTCCATATTTTGAGCTACAGTAAGGGGGTATAAATGG
AATCATTCTGTTTCACTTTTCACATTAATTTTCTTCCATCTTCGTCGAGC
ATCCAGAAAAACATTCTTGCTAAGCGAAACGAAATGTATTGGTCAATAAT
CATCTTAAATACTCTCCTCCNTATCCTGTCACTCTTTTGAATGGGACTTG
AATAGTCTGATTCACAAATAtatttcagttttcaaagttGCTCCGTCTCA
GATAGATTTCTGTCTCATCGAAATATCAAGAGACTGTCGGTTTCAAATTG
ATGAGCTTTGGCTAACCTTTTCATTTGTCCTTGTACGAACAAACACGAAC
AAActgaggaaaattttctattttaccattggaaagtcaaattttgaagt
tcttaattgaaaaaaacaGATTGTACCATTTGATAGAACTTGAAGAGTAA
ATGGATCATTTGTCTCAATTGGTTAACTAGGTCCCCCGGAAATGGACGAA
ACGTGAAAAGTTTTATGTTGacatcagcatttttgagaaaattgttgaca
aaaaaaattacttttaacaGACGCATCTTGAAGAGCATATCAATTAGAAG
TATAGATTGTAGGGCTTCCGTGGCTTAATCTTGAGATGTTTGAGTTTtga
attttgctgactcagcctTTTTCAGCGCTTTTATATTACCAAATATTCAG
TTAAAGGATAATTTGCCTTCGCGTGATTCGAGAATGAGAAATTATGGTGA
CCTAGTTTAAAGTGGCTCAGGAAGGAAAATCGGCGAAAAGATATATATAT
TGAGCTTTTTACACTTACGGTGTTATCAATGTTAGatgattcaataaaaa
aaaagtctaaattGTATTTAAAGGTCtcaaatctgaaaataaaaaaaaat
taattggtAAGATGAACAAAGAACAAAcaattaaaaatcatcaaatcgtC
CTATTTTTGAACTTCCATATTTTGAGCTACAGTAAGGGGGTATAAATGGA
ATCATTCTGTTTCACTTTTCACATTACTTTTCTTCCATCTTCGTCGAGCA
TCCAGAAAAACATTCTTGCTAAGCGAAACGAAATGTATTGGTCAATAATC
ATCTTAAATACTCTCCTCCTCCTTGAAATATTGTTCAGTGTTTTTGGTAA
CCTCACTTCAGCCATCATTGTTTTCAAGTTGAAATCTCCACGATTAAACT
TCATCAATACTGTGTTGATGTTGCTCTTCGTGTCACATATTTTTGCAGCG
ATGGCGCATTCGGCTAGCCACAGCACACTGATCGCCACCACTAATATAGA
GGCAAAGACCGCTGTGACTGGCGAGATTTCTTCGTCGGAGTTGTGGTCAA
CTTCAGAGCGCTGTTGTCTTTAGTTCGCTTCATCTTCATCTATAAACCTT
TTCTTTACGAGCAGATGACCAGCACACACGGTGTGTTCGCCATTCTTTTG
TACCGTCGCTGGGTACAACATATGGAGACGTTTTTCTTCCACCGCCTATC
TCACCGTCGTCATCACTGCCAACATCGCAAGTATCATGATCTTGGTATGC
AACATCTACCTTTACCGTTCCGTCAAACGTCAATGTAATGATATCGCTTC
CACCATCGTCACGACTTCCCAAAACGAACAAAGGAAACAGAGGAAAGACA
TGCAAAAATGTTCcttgaaatcattgaaaatgTGCATATGGGTATCTTTG
TCTTTCTACATCACTTTTGTGCCGGCTGTCGTTCTCCTGTTCATCAAAAG
AGTCCTCGGTCAGAGTAATGATCTTCATTCGAATCACGGAAAACTGATGG
AACAACCCAACATCGGCCTCTATTTTGATTTCCTCTCCTTAATGGTGATT
TTATCAAATGGGATTTGGGACGTGCTCATCTTTTACAGATACAACACGAA
AGCGAGAAGAAAATTCGTGAATTTCTTCAGAAGATACAAAGAGGACAAAA
CTGTTCCCAAGCAAGTCTCATATTCAACCAAGACCTCAAATGTTCAAATG
AGCGTGAAGAGTGTAGTTCAACAAAATATTACAAACAATTAGACTCTAGC
AAAATATTGTTCCTTTAAATCATGAATCAAACTATTTTAATGCCTTCACG
AGTTTAGAAAGAAATGACCTTGTCTTctggaaagaaagaaagaatatttt
cttttcgTTTTACTTTACATCATTTTATGAAATCTTTATGGTCCCTGATG
CCTTGATACGGATTTTTTAATGATGAAATGTcctgaatatttttatttgg
acCTCGGGACAAGCATTTTAGCATCAAAACAGGGCTGGATATAATGAAAT
GCCAGTTTTATATTTCATGTTATTATTAAAAGTAGAACTCGTCAGGGGCA
GAAACAATTAATTCTCCATTGGAACTTTCGTCAATCGAAACTTTCTTTAT
TCCAAACAATGTTGTTTTATTCGCCTCACACAGACTAAATagctaattca
aatttttaattttggaaaaatgtcaAAGGtccaaattttgattatttgag
ATCGTGGAAAAGTCACAATTGTGCAAATATGTTTTCATCGGTTTTCTCGA
GCTTGTTTAGTGAATTTTCTTTGCCTATCTTATAATTCTGAAAAACACTC
AAACGACCGACTGGAATTGtacaaaaaaattgtatatctttttattaGAG
ATTTGTTATCAGCAATGCAAGACCCTGAAGCTGGGATCACCTTGACCAAT
CACACCGTTGGTGCAGAACATTTCAAAATGTGCTTCTCGGGTAAGCTCAG
ACTACTCTTTAGTATGACTGTGTTAGATGATATAAGTAACTTAAACGTTC
CCCATACATATAAGATTCTCGAATTTCAATTCTTCCTTAGGACCATGGCT
GNTAATGATGAAATGTcctgaatatttttatttggacCTCGGGACAAGCA
TTTTAGCATCAAAACAGGGCTGGATATAATGAAATGCCAGTTTTATATTT
CATGTTATTATTAAAAGTAGAACTCGTCAGGGGCAGAAACAATTAATTCT
CCATTGGAACTTTCGTCAATCGAAACTTTCTTTATTCCAAACAATGTTGT
TTTATTCGCCTCACACAGACTAAATagctaattcaaatttttaattttgg
aaaaatgtcaAAGGtccaaattttgattatttgagATCGTGGAAAAGTCA
CAATTGTGCAAATATGTTTTCATCGGTTTTCTCGAGCTTGTTTAGTGAAT
TTTCTTTGCCTATCTTATAATTCTGAAAAACACTCAAACGACCGACTGGA
ATTGtacaaaaaaattgtatatctttttattaGAGATTTGTTATCAGCAA
TGCAAGACCCTGAAGCTGGGATCACCTTGACCAATCACACCGTTGGTGCA
GAACATTTCAAAATGTGCTTCTCGGGTAAGCTCAGACTACTCTTTAGTAT
GACTGTGTTAGATGATATAAGTAACTTAAACGTTCCCCATACATATAAGA
TTCTCGAATTTCAATTCTTCCTTAGGACCATGGCTGGGACAACTTTTAAA
GCGGGAGTTGATGTCTAAGGTGACTTGATTTTTACAAGGGAGTTGAGAAA
AAAGCTTGAcgtgacaaaaatttttttactttgcAGGAGAGGACTTGATC
TCATGGCTATTATCCTGGGCGTTCGTTCAATCTCGTGAAGAAGGGCGTAT
CGTGGCGGGTCAGCTCTTGGAGAAAGCCTTCCTGCATCCTGTCGGAcctg
aattagaaaaaagttttaaaaggaCCGCCTCAAGAATGGCGTTTGGGGAT
GGTTCATCTAATCTTTATCGCTTTGTAAGCACATCCTAATCCATTTTCAT
CTCTTTTGTTAAGTAAGGTTTAAGAaagacaaaatatttaaaagcgCCAA
CTTTATGATTATTATATTAAGCAGCGCAGTATTTCTTAAATAAGTATGTT
CTGCAACGTGTTTCTGTAGGATCTTCTAAAATACGAGACGTAATTGGCTG
AAACTAGGCTCCGTGCATCcccgaaatttattttgatattcatgatatgc
accattgcaatgtcttctgacattacatcacggacccaatagctggtTAG
TTgtacgtaaaatcagtcaatacgtcacttgcaaccaatccgttgttggg
tccgtggaagacattgtaatggtgtTGTATTGCTATTGTCGCGCGGGAAG
AGGTTGTGCACGGTTCTCTTCTGGCGCGATAAgcgaatatttatttttat
gccTCAGGCGTTTAAGATCTGACCCGCCGCTAGAAGACGGGGAGGACTTG
AATGTACAGTGGAATTCAGAGTGACAGTAGAACAAAGTAGACAAGAGTTT
TTCGGCTCGTGCATATTTATTTCAATTCATTCAGATGATAAAGTAAAGTT
ACAcacaataaacaaacaaatttaaatgtcaatatttcaCCTGCGTTCAG
GCGTCGCCGCTCACTGCAGTTTATTGCGACTTGGGTTTTATTATTAACTC
TGCGCGAGAACCCCATAACTCCGCAGTTCACTTCGTTTGATTCACCACCT
GTCTCACCCAGGCACTTTCCAACCTTACGGTCCAGTCTCTAAACGACTCT
GCTTCAGCATTCTTTGTGAATGCGCATGGCAGTCAGACCGGGGTCAACGG
GGTCCACTTGTGGAATCAGGCTAACCTAGGTCTGATGGCCACGCAATCCG
TGATTCCTCAATACGTCTTGTTCGAACGAACGCTCGCTGAAGAATATCTG
AATTTCTATATCTGGTTGAGATATTTTTATCTCATGCATAATGCATATTT
ACAAACATTCAAAcatacaaaattctatttataAGTCCCTCATGACACTA
TAATgcataataaaaaaagaaaaaaaaaagaaagatgggGGAAAGTTGTG
ACAGAAATATTgtagacgatacgcatcccctatataaAATCAAATCAGAg
aggatgcgtgcagcctaggcTAAAACTGACTAACCTATAACATTTTCAGT
TCGCGTTCGTCTTTATACCGGTAGTCTTAACCATACTATTGACAAAGCTG
CAAAGGGATTTCATCGCTCCCAATATTACTCGTCAACACCATGTCTTTCT
TTCTTTGCAGTCTTTGTTGCATACCAACAGTTCACTGGATGTGGATTTCG
ATCTGTCTGATTCTTCTGATGATTCGGACGATGACGGGGTGAGTTTTCCC
AATTTAACTGATTATTCAATtcgtttttcttcttatttATTCATGAGATA
CTTCAACTATTTTTATTATGAATTTTATTTATAGGTTTTGGATAACTTCC
AAGGAAAGATTATCAAGCAAGGATTTCTTGTTAAAAAGGTAAACTTTAAC
GTTCCAACAGCTGGGCAACAGTGTACCTAAGAGAAGAAATATCGGTGCAA
TTCGGCAGAGTTTATGATATATAGCAAAAGTCAATTATTgcgaatgaaca
aaaaattacagtatgtggctcccaaaacggcgatcaaatttgaaatttct
ctcaaatctagaggaaaagagattttacaaaaatttttgctgcatgaaaa
cctttaacatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNaaagataggtagcttttttctaatggcccccaa
aacggaggtttgaaattttagcgatttctcgagatatctttaaaatatga
atacaaaattttgaccatagttttgaaatatggtttagagggttttgggc
ataaatttgtttgataaaaattttacagtatacaatgccggacaaaaggt
tgtagacaaatggaatttcagtaaaaaatgatgagaaatagagcaaaatg
actcttcaatgtgtctgcaAGGGGATGGAAGTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGTCGTTGCATt
acttttgaattgcttttgagggaaccacaagcaaaaaatcagcgttttga
tactggtgtaagccagttaatcaagcccttgtggttattacagaagtcta
caaaccttttgtccagcattgtacccctggttgtcaaaatgcaggtttgg
ggcccccaaaacggaggtgtagttaaaatctaattattaattattaagcc
cagtggtaatagggggaaaaactatgaacatatttgtgttttcccttaaa
tttacgacccgatggatgtaaaatttatgatttttatgaaatatttcaag
atttttgatattgcaaagtccaaactgaaaaattagaaattttcaaaatg
acaatattGATTTAAcaactcttttgaaaatagttatattcatgtatgga
ataagctgtgaaaattttagaaaaacagcttaactgaaaccgaaaatatt
aagctttaaagatatttttctcctatattttgcaaaaaaatgacagaatt
tgccgttttttctgattcagcgaaaaaatttatatataatgttaattttt
tttataaactattaactcaaggtgataggaatagaattccaagatttttt
gctttttctcatatttagaattttcggttttgtcaatgctgattctaggg
ctccgaAATACTGgctgaccttcaagatgctatatcttttaccaatcTTC
TAAAGTCaaagatgtatctgcattttctgaacgacattaggtgtagaaag
tttcctataccccgttttcataacttattttcaatatccaaggagctagg
gtgagttatatgcaatttttatctaattttggtgttaaaatatttccttt
agacgcaaatatgttattttgaattcaaaataaactaaaatcgtttaatt
ctgataaatctacaagtcagaatcttcattttaatgaaaacctccgtttt
gggggccgtctccgttttcggggccatatactgtagtagTTCTTCCCTCA
ATGTGTGaccttattttatttttttttaagaacgaCGAGTATCATAAAGA
AACTTTCAAATTGTTATTTAGGGTCAAGTGCGACATAATTGGAAAGTGCG
GAAGTTTGTTTTGTACGATGAACCAATGAAACTTGTCTACTACAGCCCCA
CCAAGGTACTCACCCTCATGTGTGATCTGAAAAGTCAATCTTTGATTTCT
CTGTAAGAGGAGTACTTCCCTGTTCTAACAAGCTAAATTAAGTTAGACAA
ATGATGTGCGATATTTCCTAAGGAAATTTACCAAAACCAATTTCCTGTAT
TTTGAAaggaaactttccaaaaacaatctcttgtatttttcaagggaaat
aacctaaaacaatttttttattcctcaagaaaaattatttaatcaatctc
ttgtatttctcaaggaaaattacCAAAGCAAATCTCTTGTAAGGGCTTTC
CAATTTCTTTTCTTGTACAGTCAGAGAAGAAAGGACGCATCAAATTATTC
GGAAGTGAAGTCAACGTTTtgaatgaagaagaagatgaagatgcTACTTG
CGCCAAAGGTATTTTGGCGATGCTTATGTTAAAAGTTGGAACCTACTAGG
GTTGATTGAGTAGAGCTGGCTTGCTCGCTGGAAGTTATTTCTTGTCTACT
GTTTCATAAGTGAAAACTAGAGAGTTTTTTCCTTCCCTAGAAATATTCGG
CTGTTGGGTCCCTCTTCATCACATAGATTACTATTAATAAACCTTTCAAA
GTGCAATGAATGACTGGAACGTTTTGCCCTCAAGAAGACAATTATAGGCA
ATCTGTCTTAGAAGATTATTATGAatgattttcctttgaaaatacaatat
ttggacagacagacagacagacagacagacagacagacagacagacagac
agacagacagacagacagacagacagacagacagacagacagatagacag
acagacagacagacagacagacagacagccagacagacagacagacagac
agacagacagacagccagacagacagacagacagacagacagacagacag
ccagacagacagacagacagacagacagacagacagccagacagacagac
agacagacagacagacagacagccagacagacagacagacagacagacag
acagacagccagacagacagacagacagacagacagacagacagccagac
agacagacagacagacagacagacagacagccagacagacagacagacag
acagacagacagacagccagacagacagacagacagacagacagacagac
agccagacagacagacagacagacagacagacagacagccagacagacag
acagacagacagacagacagacagccagacagacagacagacagacagac
agacagacagccagacagacagacagacagacagacagacagacagccag
acagacagacagacagacagacagacagacagccagacagacagacagac
agacagacagacagacagccagacagacagacagacagacagacagacag
actaTTGATCATTATTCGATGTTCTTAACCCTCATAATGTGTTGTtatat
tttcctgtttttcttcttcaggaGCGAAACGAATAGTTAGGGAACACTGC
CTCGTCTTACGGACGAAGAAGAATACGAAATATATTCTTCAAGCGCCTTC
TCTCGAAGAAATGAGGGTTTGGGTTCGGACTCTTGAAGGGCTTTTCGATA
AATACAAAACTTGAAGGGTTGCTCGATAAATACAAAACATGATGTTGCTT
CGGGAGTTGGCTATGCACATACAACGACCGGTGTTATCTATTCTGTTAAT
TTGAATGGACGAATTTTCTCACCTACCTCCCCCCTCCGGAGTATATAGAA
CATGCATCATGTTGCCAATGGTCTTTGAACGCTCTCATCTCCCTTATCCT
AATTCCCATTGTTCCCATGAAAGGTATTCTTCTCATAGTAAAGCCTTCTT
ACATATCCAAGTACATTCCTTCTCTCCACCCACAACTCCATTGTAGTCTG
TTGTAGTAGAGCTAAATACAGCTTGTCTATTTCCAACCTTTAATAGATAC
TCTTAGAAGCTCTTAGTGAGAAGGCTCTCACTTTTTGGAATTGTAATTTA
AATGCTTTAATATATTTCTATTGTTAGACATAGGTCTTGAGATATTtatt
aatatatattttttatattctgACACATATacttttttaccaaattttat
aTGCAAAAGCGATAattgttttctaattttttataatttttatgattGGG
AAATTCACAGATTGTCAACCGAGACAATCAATGTAAGTAACTGTATCTCA
TGTCATCATTTTCTAATCAGCACGAAGGTATAGCTCATTTGGGCCATTTT
TGGAATGCCTATCAGGCTAGGTTTTGTCTTTCTACGCTAGTTATTGTCGT
AATTAACGATAGAACTCGTAAAATCATTTTACCTTAAggtaacttttttt
ggtgagaactaattttagcgcattacacgttttttttttttattagaaca
cctaaaatttggctgagcctggatgtgcttattttttttagcaattttca
gcctaaaatgttcttaaatgcgttcttaatttttcggactactttaaatc
gacaacatcatgcaaaataaagaNAAaacatcatgcaaaataaagagcac
ttaaagttggtaaaatttggacaatatttgactctcgattttagaaaatc
catc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021773XLOC_021773Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036864-exon-sc0001526-1491911889:22784..22864TCONS_00036864-exon-sc0001526-1491911889:22784..22864Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:22784..22864TCONS_00036864-exon-sc0001526-1510915933:22784..22864Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:22784..22864TCONS_00036864-exon-sc0001526-1575043694:22784..22864Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:23452..23529TCONS_00036864-exon-sc0001526-1491911889:23452..23529Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:23452..23529TCONS_00036864-exon-sc0001526-1510915933:23452..23529Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:23452..23529TCONS_00036864-exon-sc0001526-1575043694:23452..23529Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:23773..23910TCONS_00036864-exon-sc0001526-1491911889:23773..23910Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:23773..23910TCONS_00036864-exon-sc0001526-1510915933:23773..23910Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:23773..23910TCONS_00036864-exon-sc0001526-1575043694:23773..23910Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:25243..25337TCONS_00036864-exon-sc0001526-1491911889:25243..25337Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:25243..25337TCONS_00036864-exon-sc0001526-1510915933:25243..25337Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:25243..25337TCONS_00036864-exon-sc0001526-1575043694:25243..25337Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:28832..28923TCONS_00036864-exon-sc0001526-1491911889:28832..28923Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:28832..28923TCONS_00036864-exon-sc0001526-1510915933:28832..28923Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:28832..28923TCONS_00036864-exon-sc0001526-1575043694:28832..28923Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:29770..29957TCONS_00036864-exon-sc0001526-1491911889:29770..29957Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:29770..29957TCONS_00036864-exon-sc0001526-1510915933:29770..29957Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:29770..29957TCONS_00036864-exon-sc0001526-1575043694:29770..29957Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:31244..31321TCONS_00036864-exon-sc0001526-1491911889:31244..31321Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:31244..31321TCONS_00036864-exon-sc0001526-1510915933:31244..31321Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:31244..31321TCONS_00036864-exon-sc0001526-1575043694:31244..31321Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:31418..31471TCONS_00036864-exon-sc0001526-1491911889:31418..31471Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:31418..31471TCONS_00036864-exon-sc0001526-1510915933:31418..31471Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:31418..31471TCONS_00036864-exon-sc0001526-1575043694:31418..31471Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:33355..33438TCONS_00036864-exon-sc0001526-1491911889:33355..33438Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:33355..33438TCONS_00036864-exon-sc0001526-1510915933:33355..33438Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:33355..33438TCONS_00036864-exon-sc0001526-1575043694:33355..33438Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:33754..33841TCONS_00036864-exon-sc0001526-1491911889:33754..33841Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:33754..33841TCONS_00036864-exon-sc0001526-1510915933:33754..33841Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:33754..33841TCONS_00036864-exon-sc0001526-1575043694:33754..33841Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1491911889:34905..36037TCONS_00036864-exon-sc0001526-1491911889:34905..36037Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1510915933:34905..36037TCONS_00036864-exon-sc0001526-1510915933:34905..36037Clytia hemisphaericaexon
TCONS_00036864-exon-sc0001526-1575043694:34905..36037TCONS_00036864-exon-sc0001526-1575043694:34905..36037Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001526supercontigsc0001526:22784..36037 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.295519	0.224178	0.233579	0	2.30905	1.63537	2.18037	1.50868	1.15119	1.97862	1.15547	0.747826	1.27621	0.983102	1.08475	1.02454	1.20392	1.06863	0.833764	0.790825	0.825837	0.9554	0.653229	1.09905	0.550164	0.963557	0.491478	0.657269	0.968513	1.14286
Blast
[Close]
BLAST of TCONS_00036864 vs. Swiss-Prot (Human)
Match: PLEK2 (Pleckstrin-2 OS=Homo sapiens GN=PLEK2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 1.738e-43
Identity = 114/370 (30.81%), Postives = 167/370 (45.14%), Query Frame = 1 
Query:    4 GHIRHNWKSRWFILYSSRLDYFKSKGD---LVPKGSIRLKGCSVICPDPEYVKKECVFRLIEIYGTEYLLQCANEEERTSWVDCISQAVRXXXXXXXXXXXXXDRPDLGSPPVEDKTFSNDSLVVLQNRVTHEDLLSAMQDPEAGITLTNHTVGAEHFKMCFSGEDLISWLLSWAFVQSREEGRIVAGQLLEKAFLHPVGPELEKSFKRTASRMAFGDGSSNLYRFSLLHTNXXXXXXXXXXXXXXXXXXXXXXXNFQGKIIKQGFLVKKGQVRHNWKVRKFVLYDEPMKLVYYSPTKSEKK--GRIKLFGSXXXXXXXXXXXXATCAKGAKRIVREHCLVLRTKKNTKYILQAPSLEEMRVWVRTLEGL 1098
            GHI HNWK+RWFIL  + L Y+K +G      PKG I L GC++ CP  EY  +  + +L     TEY L+  + EER +W   I+ A+                   G P    +  S  +   L   ++   ++  M D   GI  + +      +K  F G  L+ WL+S +F  SR E   +A  L+E+ FL PVG     + +       F D S+ LY F+          +      S   +         G ++KQG+L K+G  R NWKVR+FVL  +P  L YY P+K E +  G   L GS V+ L +          G K  V+ +   + TK +T Y +QA S  E   W+  ++ L
Sbjct:   15 GHIVHNWKARWFILRQNTLVYYKLEGGRRVTPPKGRILLDGCTITCPCLEYENRPLLIKLKTQTSTEYFLEACSREERDAWAFEITGAIHA-----------------GQPGKVQQLHSLRNSFKLPPHISLHRIVDKMHDSNTGIRSSPNMEQGSTYKKTFLGSSLVDWLISNSFTASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFA----------ESYKKKISPKEEISLSTVELSGTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNG-----VPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL 352
The following BLAST results are available for this feature:
BLAST of TCONS_00036864 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLEK21.738e-4330.81Pleckstrin-2 OS=Homo sapiens GN=PLEK2 PE=1 SV=1[more]
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