TCONS_00036850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036850
Unique NameTCONS_00036850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3713

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036850 ID=TCONS_00036850|Name=TCONS_00036850|organism=Clytia hemisphaerica|type=transcript|length=3713bp
TATTACCGAAAACTGTGATCCTATTCATGCAAATACAAAATATCATTTGG
AGatttaaaatatcatttttgtgGTTTTGTCTGATAAGAAATCAAGATGT
GCTGTAATTTGTTTTCATCTAAAGATTCCAAGAAAATTGTACCACTCGAA
GAAGAACAGccATCTATTGGTTCAATCAAGCTCAGCGATGGACATTTTAT
CCCACAATTGGGATTTGGAACTTGGCTTTCAAAAGCTGGTGAAGTTGGAC
TTGCTGTGAAACACGCACTGCAAAACGGTTATACACACATTGATTGTGCA
AAAATATATCGAAACGAAGCTGAAATAGGGCAGTCATGCAAAGAATATTT
AGAATCAGAAAACGCAAAGAGccgtaaaaacatttttataacaTCAAAAC
TATGGGTTAAGGATTTCGGTAGCGTTAGAGAGACTTGTATGGAATCGCTA
AAAGATTTACAAGTAGATTATTTGGATTTATATCTCATTCATATGCCATG
GGAAGTTGATTCCACTATTGATTATGGAATTCCTACTGATGGTGTTGGCT
TGATTGGTTATAACGAAGAAAGAATCAAGGAAACATGGTCAGAAATGGAG
AAATTAAAAGACGAAGGACTTGTCAAATCTATAGGTGTCAGTAATTTCTC
AGTGATGAAATTACAAAAACTGTTGGATTCACAACCCAAACATATACCAG
TCATCAACCAAGTGGAATCACACCCTTATCTTCCTTACCAAAAGATGTTT
GATTTCTGCAAGAAAAATGGTATTTTGATGACGGCATACTCACCGTTGGC
AAACCCTGGTCGACCAAAGTTCTTCCAAAACGACAACGAACCTTACCTCc
ttggtgatgacgtcatttccGCTATCGCTCACAAACATAATTCTACTAAT
GGCCTGGTTTTACTAGCATGGGGATTGCAGCGTGGAAATTGTGTCATTTC
GAAATCGACCAATGAACGACGTATcaaagaaaatatgaaatgtCTTCGCT
TGAAACTTGACCAACAAGATATGAAAGATATTAGCTCAATTACAACACGT
TTTCGATACAGTCAGAACCCATGGGCTGTTCCTGAAGGAGGCAAACCTGA
AGATTTGTGGGACGGAGATTTTTTGGGTTAAAATAGCAAGATATTTTTTC
ATGCGTGGAAAATGTTTTCTGTTATGCTAGAAAAGTGATATTTGGTTCCA
AATGACATCCAATGATGAATTGGACAAAGTATCACCAGGGTTTAGTTGGA
TTGAGAAGCTTCTCTAGACAGAGGTACAATAAAACTAAGATTCGATAAAG
AAGAGTATGACGATATCAGCAAAAGCTCTTGGTGAATTTAGTTAGTGGCG
ATTTGATAGATTACAAAAATCATTGCTTTCTTAGGACACTCGATGAAAAG
GAACATATTTTGATGGTCTAGGGATCTTTTTAAGTGTATTAAATCTACTA
TTTATCCAGAGAAAAtgtacaaagtaaaaaaaagtctgtaAATAGTATAC
TACTGTATGTATAATCAACAAATAAAACACGTGTATATCCTACTAAAACA
TaagaattttgatttaaaaattttaacataAATAACAAGAACATTTTACT
TTATCTAGAAAACTAACAGCCTAATAAGGGCCTTAATAAGAGGTttaaaa
actctttaaaaatttccaataatTTGCAGAAACTTAGTAACTGTTGTATA
CGATAGGTCAGATAGAAGGTGCCCTGAAAGATGCTTCTTTAGATTTCCTT
CAGGAAAAAATATCTGACGCCACCAAGATCAACGCGTCAACCTgagcgtt
ttttttttcagtctaACCTAATTTTAAACTTGATAAGCTAATAAACAAGT
TCCATCTTCTTTGTTCTGGAAAGTTTTGTAAGCATTCCCTTCGAGTAAAT
CATCCGCCGACGTCGATCGCTCGGGCCGCGAGCTTCGATCAGAAAATGTA
CTTGATCGATAGATTTCGCTGGCTTTATCATCTACAGCTAACAGATGTAC
TCCATCCGTCATATTAATAGCTGGGTAAGTGCTGTCTTCGCCTGCAAGTG
CTGAGTTTGGTAGTTTAACAAGTTCGATGGAGTAGCGTTTTTTATTTCGT
TTAGTTAAAGTATTTGATACAGAGCCTGCGTAACTTCCGTTGAAGTCTTC
TTCGTTGATGGCGGGATGTTCATAGCGCGTTAGCAGCACTGTAGTCGGCA
TATCTTCAGAAGAAAGTAAGGAAGAACGATTACTTGTTCGTGTTGGTTTA
TTGTTTTGGTAATGAATATATGTTGAAAACGCACTGTCTGCAAGACCGTT
TGATTTTGATGAATACGCTGATTTACGGCGTATACGTTCGTACTCACGCC
GCACGTCATTATTCATGAGACAATAACAAACGAATAAAAATACACCCTGG
AATGAGTTCAAACCAGTAAAGATGTATTGGAAGATCAAAAGTTCTTTATT
GACAGCTAAGACGCCAAACACCCATGATAATCCGAACACGGGCATTAAGA
GTAAAGTTAGCCTAGCAACTCGACGCAGTTTGTTGAACTCCATTTCGTTG
ATACACATTTTGTGAGACGCACTTAATGTTGCGATGAGTATAATCGTGTT
GATGGTCAGGACGAATAATGCAGGTCCGACGAATATCCATATAAGGAAAT
GTTCGGTAGAAATCCAACAAAAGTTTGGACGAGTGAAATGTTCGTGGTAT
TTGACGCCAGCTAAAGTCACGATAACAGCTGGTAGCACTAAATGAATGGA
AATAGATAGGAGTTGAAACATAGTGCAAGTTGTTTTCCAAGCAGTTCCAA
CTACCATCAGAAAGTTGATTTTAGATTAAAGAATTATTGATTATCTAGAG
AAATATAAGGCAttgaaatttggcagattttCGGAACATTTGAGGGTTGA
TATTTTCCAGTAAACTCTAGAAATCTTTAACACAGGGATCAATATTTCAA
AGTCAACTTACTCCATCCGATAAGCATGTagactttcatttttcttgagC
CTTTGAACACTTTGACAACCATCAAATAAACGTGAAGACCTTCTACCAGC
ATCCAGAAAAAGGAGGAGAGGAAAGTGTACAACATCGCGATTGAAACACC
AAGACAAACATACTagaaatataaatttgaaaGCAGTTTAAAGTTTTATT
ACGTAGCACTGTACTGTCAGTCAGTCTTTAAAGTACCTCAAGTGTAAATA
ATCATCTTTACTGACTATATCAGTGATCCGATAACAATTAATTTAGCCAT
TAGGAATTAAGTGATGAGCTAAACAGCGATGGGACGCTggggataaaaaa
aatttcaataggTGGGGATTCTTAAAGTTTTAGTGGTATTTCCAGTGGGT
AACAAGGTAAAGTGTAGTTCTCAATGGGTATGAACTTTTATAGTACTTCT
TTCATCGGGATGATATTTAATCGATTTTTTAGTGCCCAGTGTGTCCAagg
catttttttttcaaacagaaaCGAAAAGGTCTTCAAATCTTGCAGAATTT
TGTTCAATTTGGAGATGGGAAAGCCTCTTTTTGAACCTCGCTGAGAcaga
aatccgtctgagacagAGAACCTTTGTACACTGTGTCCCACTAAATGATT
TTATGACTGTACCTTGTATTTATAGACTGAATCAGCAGCGATGAAGAGAG
CATTAGAAAGTGCAATGGCCATTGCCAAATTGATGTGAATTAGGTTGCGA
TCCACTTTGACCA
Run BLAST on NCBI

transcript from alignment at sc0001525:8472..14301-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036850 ID=TCONS_00036850|Name=TCONS_00036850|organism=Clytia hemisphaerica|type=transcript|length=5830bp|location=Sequence derived from alignment at sc0001525:8472..14301- (Clytia hemisphaerica)
TATTACCGAAAACTGTGATCCTATTCATGCAAGTAATATAAAAAGTTCTC
ATTACAATGTATCTTATTTTATAAAACTTGTGTTAATAGGCACTAATCAT
TTAGTCGTGTGCCTCTTTTCTATGACATTTCTATCTTATTAAAACTTGTA
TCGTGTTTGTTTAAAATGTAGTCAGTAGCAACGCAAATAAAATGGCTTCT
TGTACTTTTTGTAAGACTAATTTAAAGTGGTTTGTGAATTCTCTGATACT
TAGTTACATGTAATGTTTTGATGTTATAACTTTCAGATACAAAATATCAT
TTGGAGATTTAAAATATCATTTTTGTGGTTTTGTCTGATAAGAAATCAAG
ATGTGCTGTAATTTGTTTTCATCTAAAGATTCCAAGAAAATTGTACCACT
CGAAGAAGAACAGGTAAAATTACTGTCCAGAGCTAAAAGCCTAGACGAGA
AAGGTGAACACTTGTGGGACAACCACTCGGGAAATATCAGGTTAAGAAAT
GCCTTTAAAAGTACGACAATTCAGGGAAAATCTAAACAGTATATGTTATA
TCTTGGGCCTCGTTTGTGCTTTTGACAGTGGCGGATCTAAGGGATTCAAA
ATTTATGACGAAGAGTTTTTTTAGTCATACTCCTTATAAGGAAACGAATA
CTCTCCGTCATATATTTTTAACCCTCCTCAGACCTGCCCTCGCAGTGGAC
AGTGTCTGCTTTATTGGGCCGAATTGTTTAAGACTTGGCAAATGTCCAGA
TAGCCTGTTAATCAGACTCAAACGTACAATTTTCTTTCTTTTAGCCATCT
ATTGGTTCAATCAAGCTCAGCGATGGACATTTTATCCCACAATTGGGATT
TGGGTATGTTTTTCTATTATTTCAAAGTTTTTTGCAGAAGTAATTGGTGT
GTATTTCCATAGTTTATATCACCGCTTTAAAGAGTGCCATATCTAATATT
TCAAATTTGAAAAGAGGGACACCTGGGATTGGGGGGGGGGTACTAGGTTT
GTGAGGTGACGGGTGTGTCCGAGCCAAAAATCGAAAATCGACCCTTTGAG
GAGGAAAAATTGGCGTTTTTGGGACCCTTAGAGAGAATTTTCTCAAAATT
TTTATCGATTTTCACTCGATTTTTGTCCAAATTTGGGAATTTGAATACGG
TACTATTTGTAATCGTTTTGAAAAGTTTTTGTTGTCCTTCCTTGGAAATA
TTTTTATCTGAATGTTTCTTTGTCTCTAGAACTTGGCTTTCAAAAGCTGG
TGAAGTTGGACTTGCTGTGAAACACGCACTGCAAAACGGTTATACACACA
TTGATTGTGCAAAAATATATCGAAACGAAGCTGAAATAGGGCAGTCATGC
AAAGAATATTTAGAATCAGAAAACGCAAAGAGCCGTAAAAACATTTTTAT
AACATCAAAACTATGGGTTAAGGATTTCGGTAGCGTTAGAGAGACTTGTA
TGGAATCGCTAAAAGATTTACAAGTAGATTATTTGGATTTATATCTCATT
CATATGCCATGGGAAGTTGATTCCACTATTGATTATGGAATTCCTACTGA
TGGTGTTGGCTTGATTGGTTATAACGAAGAAAGAATCAAGGTACAAGTGT
GTTCAAAAAATAGGGAAAAAATCAAGAAAACTACAAAGGAGTGTCTTTAA
CTCGAACCTCTATAACTCAAATGTCTCCTTAAATCGATCAAGTTTTAGTC
TCGTCTTAGTTAATAATACGTTATAAACCTTACTCCACAACTCGAGATTT
CCTTAATTCTAATACATTTGTATTCACCGTCAGCTCTCGAGTTATTGGAG
CTCCACTGTATTGCATTGCCCTTTGGGATTTATTCAACGTCAAGTTTGTC
AATTTGTGTTGCCTACCGGAAAGATTTCACTGTCTAAAAGCTTTGGGGGT
TGAATTTTAGAATGATGGACATGAAAAAAAATGATGAATTTTAGTAGATC
CCTTTGCTTTGTGCTGAATATTTTTAACCCATGCAATAAGGCTGTCTAAA
CCAATAATATTCTCTGTTCTAGGAAACATGGTCAGAAATGGAGAAATTAA
AAGACGAAGGACTTGTCAAATCTATAGGTGTCAGTAATTTCTCAGTGATG
AAATTACAAAAACTGTTGGATTCACAACCCAAACATATACCAGTCATCAA
CCAAGTGGAATCACACCCTTATCTTCCTTACCAAAAGATGTTTGATTTCT
GCAAGAAAAATGGTAAGGCTCCTTTTCCTGTTTTACACTGATCAAGTGTA
CTAAAGAAATTAATGTTGACGAAAAATTAGCCTATAAAATATAACTTTCA
AGAAAATCCCTAACCCTAGAAATTTTATTCCAGTGGAAATTAGTTTAACC
TCAAAGTAAGAGTCGACTTCTAAACTTTTTCTTTCTGGGCTTGTTCGACA
CACTGAGTTACATCATCGCCATCTTACTTAGGCTTCTGTTAAACCCTCTA
ACGAAAAAGCTTCTTGTATTCTGCCAATCAGACTAGTGCTATCTAGTCTA
TTAAAAAGGCCGTAAGTGATTGCACGTTGATCTATTTCCATTCAAGGTAT
TTTGATGACGGCATACTCACCGTTGGCAAACCCTGGTCGACCAAAGTTCT
TCCAAAACGACAACGAACCTTACCTCCTTGGTGATGACGTCATTTCCGCT
ATCGCTCACAAACATAATTCTACTAATGGCCTGGTAAGTAAACTAATATA
TTTGGTTCTGTATAATACTCTCAGCTGCCTTATTAAAGGGTTTTAAAGAT
TTCAATCTTCAATGAACTTGAAACTTGGGTGCAGTAGTTAATGATAGGCA
ATTTCTTTTTGAAAACCTTAAAACTGGTTGAATACAGACAATGTTCCTTA
TTTTAAGAAAATAGTTTCCAGCCTAGATAATCTTTGTTCTAGATATCTGA
GATCTTTTTCTACCGATTTTTGGAAATGAGAAATATCAAGCTATTTAGAG
CAAAGCCTGGGACTTTTGGATTTGGCTTTTCTGAATTATATCACAATAGA
ATTTCCTTTCTTAACAATCATAGGTTTTACTAGCATGGGGATTGCAGCGT
GGAAATTGTGTCATTTCGAAATCGACCAATGAACGACGTATCAAAGAAAA
TATGAAATGTCTTCGCTTGAAACTTGACCAACAAGATATGAAAGATATTA
GCTCAATTACAACACGTTTTCGATACAGTCAGAACCCATGGGCTGTTCCT
GAAGGAGGCAAACCTGAAGATTTGTGGGACGGAGATTTTTTGGGTTAAAA
TAGCAAGATATTTTTTCATGCGTGGAAAATGTTTTCTGTTATGCTAGAAA
AGTGATATTTGGTTCCAAATGACATCCAATGATGAATTGGACAAAGTATC
ACCAGGGTTTAGTTGGATTGAGAAGCTTCTCTAGACAGAGGTACAATAAA
ACTAAGATTCGATAAAGAAGAGTATGACGATATCAGCAAAAGCTCTTGGT
GAATTTAGTTAGTGGCGATTTGATAGATTACAAAAATCATTGCTTTCTTA
GGACACTCGATGAAAAGGAACATATTTTGATGGTCTAGGGATCTTTTTAA
GTGTATTAAATCTACTATTTATCCAGAGAAAATGTACAAAGTAAAAAAAA
GTCTGTAAATAGTATACTACTGTATGTATAATCAACAAATAAAACACGTG
TATATCCTACTAAAACATAAGAATTTTGATTTAAAAATTTTAACATAAAT
AACAAGAACATTTTACTTTATCTAGAAAACTAACAGCCTAATAAGGGCCT
TAATAAGAGGTTTAAAAACTCTTTAAAAATTTCCAATAATTTGCAGAAAC
TTAGTAACTGTTGTATACGATAGGTCAGATAGAAGGTGCCCTGAAAGATG
CTTCTTTAGATTTCCTTCAGGAAAAAATATCTGACGCCACCAAGATCAAC
GCGTCAACCTGAGCGTTTTTTTTTTCAGTCTAACCTAATTTTAAACTTGA
TAAGCTAATAAACAAGTTCCATCTTCTTTGTTCTGGAAAGTTTTGTAAGC
ATTCCCTTCGAGTAAATCATCCGCCGACGTCGATCGCTCGGGCCGCGAGC
TTCGATCAGAAAATGTACTTGATCGATAGATTTCGCTGGCTTTATCATCT
ACAGCTAACAGATGTACTCCATCCGTCATATTAATAGCTGGGTAAGTGCT
GTCTTCGCCTGCAAGTGCTGAGTTTGGTAGTTTAACAAGTTCGATGGAGT
AGCGTTTTTTATTTCGTTTAGTTAAAGTATTTGATACAGAGCCTGCGTAA
CTTCCGTTGAAGTCTTCTTCGTTGATGGCGGGATGTTCATAGCGCGTTAG
CAGCACTGTAGTCGGCATATCTTCAGAAGAAAGTAAGGAAGAACGATTAC
TTGTTCGTGTTGGTTTATTGTTTTGGTAATGAATATATGTTGAAAACGCA
CTGTCTGCAAGACCGTTTGATTTTGATGAATACGCTGATTTACGGCGTAT
ACGTTCGTACTCACGCCGCACGTCATTATTCATGAGACAATAACAAACGA
ATAAAAATACACCCTGGAATGAGTTCAAACCAGTAAAGATGTATTGGAAG
ATCAAAAGTTCTTTATTGACAGCTAAGACGCCAAACACCCATGATAATCC
GAACACGGGCATTAAGAGTAAAGTTAGCCTAGCAACTCGACGCAGTTTGT
TGAACTCCATTTCGTTGATACACATTTTGTGAGACGCACTTAATGTTGCG
ATGAGTATAATCGTGTTGATGGTCAGGACGAATAATGCAGGTCCGACGAA
TATCCATATAAGGAAATGTTCGGTAGAAATCCAACAAAAGTTTGGACGAG
TGAAATGTTCGTGGTATTTGACGCCAGCTAAAGTCACGATAACAGCTGGT
AGCACTAAATGAATGGAAATAGATAGGAGTTGAAACATAGTGCAAGTTGT
TTTCCAAGCAGTTCCAACTACCATCAGAAAGTTGATTTTAGATTAAAGAA
TTATTGATTATCTAGAGAAATATAAGGCATTGAAATTTGGCAGATTTTCG
GAACATTTGAGGGTTGATATTTTCCAGTAAACTCTAGAAATCTTTAACAC
AGGGATCAATATTTCAAAGTCAACTTACTCCATCCGATAAGCATGTAGAC
TTTCATTTTTCTTGAGCCTTTGAACACTTTGACAACCATCAAATAAACGT
GAAGACCTTCTACCAGCATCCAGAAAAAGGAGGAGAGGAAAGTGTACAAC
ATCGCGATTGAAACACCAAGACAAACATACTAGAAATATAAATTTGAAAG
CAGTTTAAAGTTTTATTACGTAGCACTGTACTGTCAGTCAGTCTTTAAAG
TACCTCAAGTGTAAATAATCATCTTTACTGACTATATCAGTGATCCGATA
ACAATTAATTTAGCCATTAGGAATTAAGTGATGAGCTAAACAGCGATGGG
ACGCTGGGGATAAAAAAAATTTCAATAGGTGGGGATTCTTAAAGTTTTAG
TGGTATTTCCAGTGGGTAACAAGGTAAAGTGTAGTTCTCAATGGGTATGA
ACTTTTATAGTACTTCTTTCATCGGGATGATATTTAATCGATTTTTTAGT
GCCCAGTGTGTCCAAGGCATTTTTTTTTCAAACAGAAACGAAAAGGTCTT
CAAATCTTGCAGAATTTTGTTCAATTTGGAGATGGGAAAGCCTCTTTTTG
AACCTCGCTGAGACAGAAATCCGTCTGAGACAGAGAACCTTTGTACACTG
TGTCCCACTAAATGATTTTATGACTGTACCTTGTATTTATAGACTGAATC
AGCAGCGATGAAGAGAGCATTAGAAAGTGCAATGGCCATTGCCAAATTGA
TGTGAATTAGGTTGCGATCCACTTTGACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021769XLOC_021769Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036850-exon-sc0001525-1575043694:14270..14301TCONS_00036850-exon-sc0001525-1575043694:14270..14301Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1575043694:13889..14015TCONS_00036850-exon-sc0001525-1575043694:13889..14015Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1575043694:13449..13507TCONS_00036850-exon-sc0001525-1575043694:13449..13507Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1575043694:12712..13072TCONS_00036850-exon-sc0001525-1575043694:12712..13072Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1575043694:12090..12279TCONS_00036850-exon-sc0001525-1575043694:12090..12279Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1575043694:11619..11755TCONS_00036850-exon-sc0001525-1575043694:11619..11755Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1575043694:8472..11278TCONS_00036850-exon-sc0001525-1575043694:8472..11278Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:14270..14301TCONS_00036850-exon-sc0001525-1510915933:14270..14301Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:13889..14015TCONS_00036850-exon-sc0001525-1510915933:13889..14015Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:13449..13507TCONS_00036850-exon-sc0001525-1510915933:13449..13507Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:12712..13072TCONS_00036850-exon-sc0001525-1510915933:12712..13072Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:12090..12279TCONS_00036850-exon-sc0001525-1510915933:12090..12279Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:11619..11755TCONS_00036850-exon-sc0001525-1510915933:11619..11755Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1510915933:8472..11278TCONS_00036850-exon-sc0001525-1510915933:8472..11278Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:14270..14301TCONS_00036850-exon-sc0001525-1491911889:14270..14301Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:13889..14015TCONS_00036850-exon-sc0001525-1491911889:13889..14015Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:13449..13507TCONS_00036850-exon-sc0001525-1491911889:13449..13507Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:12712..13072TCONS_00036850-exon-sc0001525-1491911889:12712..13072Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:12090..12279TCONS_00036850-exon-sc0001525-1491911889:12090..12279Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:11619..11755TCONS_00036850-exon-sc0001525-1491911889:11619..11755Clytia hemisphaericaexon
TCONS_00036850-exon-sc0001525-1491911889:8472..11278TCONS_00036850-exon-sc0001525-1491911889:8472..11278Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001525supercontigsc0001525:8472..14301 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	11.701	9.0967	3.35571	2.42534	3.72092	2.94991	0.430102	2.36818	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00036850 vs. Swiss-Prot (Human)
Match: AK1C4 (Aldo-keto reductase family 1 member C4 OS=Homo sapiens GN=AKR1C4 PE=1 SV=3)

HSP 1 Score: 223.402 bits (568), Expect = 3.082e-64
Identity = 126/307 (41.04%), Postives = 182/307 (59.28%), Query Frame = 1 
Query:  160 PSIGSIKLSDGHFIPQLGFGTWLSKAGEVGLAV---KHALQNGYTHIDCAKIYRNEAEIGQSCKEYLESENAKSRKNIFITSKLWVKDFGS--VRETCMESLKDLQVDYLDLYLIHMPWEVDSTIDYGIPTDGVGLIGYNEERIKETWSEMEKLKDEGLVKSIGVSNFSVMKLQKLLDSQP--KHIPVINQVESHPYLPYQKMFDFCKKNGILMTAYSPLANPGRPKFFQNDNEPYLLGDDVISAIAHKHNSTNGLVLLAWGLQRGNCVISKSTNERRIKENMKCLRLKLDQQDMKDISSITTRFRY 1059
            P    ++L+DGHF+P LGFGT+         AV   K A++ G+ HID A +Y NE ++G + +  +   + K R++IF TSKLW   F    V+     SLK LQ+DY+DLYL+H P  +    +  +P D  G + ++   +  TW  MEK KD GL KSIGVSNF+  +L+ +L+ +P  K+ PV NQVE HPYL   K+ DFCK   I++ A+S L    R K + + N P LL D V+ A+A KH  T  L+ L + LQRG  V++KS NE+RI+EN++    +L  +DMK +  +   +RY
Sbjct:    3 PKYQRVELNDGHFMPVLGFGTYAPPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPG-ETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILN-KPGLKYKPVCNQVECHPYLNQSKLLDFCKSKDIVLVAHSALGT-QRHKLWVDPNSPVLLEDPVLCALAKKHKQTPALIALRYQLQRGVVVLAKSYNEQRIRENIQVFEFQLTSEDMKVLDGLNRNYRY 305
The following BLAST results are available for this feature:
BLAST of TCONS_00036850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AK1C43.082e-6441.04Aldo-keto reductase family 1 member C4 OS=Homo sap... [more]
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