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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036808 ID=TCONS_00036808|Name=TCONS_00036808|organism=Clytia hemisphaerica|type=transcript|length=528bp
TGTGCTTGCAAAGTTATGTCTAAATTTGTGGTCccgaagatgactgaaac
caacccgTAATCGGTTAGGTAGAACCACGCCATCGTTGTCACTAGCCCTG
AAAACTGAGTTAGCGCAAGGTCTGAGAAATTTAAGAGGTAGGTTTAAGCT
CGATCTTAATGAAACGTCTTTGTCCGTCAATACAGAGCTTAAGCAGCATT
TTATAAATTGCCGAGATTTGCACATGAGGGTGAtgagaaattcaaaactt
aagTAAATATTTAATGACACTTATTCCAGGAATGCGAAAGAGGAAACATA
CTCTTCATACCGCTTTCGCCCAATTCGACCTATCTATCACAACGACTGGA
AGTAGCCGTTTTCCGCGGATTAAAAACTGATTGGAAGGATGTATACTGAC
CGCATGGCGCATCGACGTAGGTCTTTGATCTGGGGGATGGATGTTTCGAC
CGACGATATCCGAAAAAGCTTAAGCTCGACCAAAAAAGTTTCACGAAATG
AAAGACTTTATCCTGGATTTGAAGGTAG Run BLAST on NCBI transcript from alignment at sc0001518:29141..30347+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036808 ID=TCONS_00036808|Name=TCONS_00036808|organism=Clytia hemisphaerica|type=transcript|length=1207bp|location=Sequence derived from alignment at sc0001518:29141..30347+ (Clytia hemisphaerica)
TGTGCTTGCAAAGTTATGTCTAAATTTGTGGTCccgaagatgactgaaac
caacccgTAATCGGTTAGGTAGAACCACGCCATCGTTGTCACTAGCCCTG
AAAACTGAGTTAGCGCAAGGTCTGAGAAATTTAAGAGGTAGGTTTAAGCT
CGATCTTAATGAAACGTCTTTGTCCGTCAATACAGAGCTTAAGCAGCATT
TTATAAATTGCCGAGATTTGCACATGAGGGTGAtgagaaattcaaaactt
aagTAAATATTTAATGACACTTATTCCAGGAATGCGAAAGAGGAAACATA
CTCTTCATACCGCTTTCGCCCAATTCGACCTATCTATCACAACGACTGGA
AGTAGCCGTTTTCCGCGGATTAAAAACTGATTGGAAGGATGTATACTGAC
CGCATGGCGCATCGACGTAGGTGAATAATTTGGATTTCTATCTTGTCAAG
TTTCTTTTGCCATCGACAATCTGTGACTAATTATTGTGGCAAGAATTCCC
TACCCCTTAATATCAATGTCGATGGGTTGAAAAGCTGCCACCATGCTCAG
AAATAGCTCACATCAACACTGATATTAGGGGGAAGGGATTTTTCAAGAAA
TGGCCacatattttgtcactgattgtataCGGTTCAGTTTCCTCGCCTCG
CCTCATGTCTTTGTCACGTGATTGACGCATTCCATTtcttaaaaacaagc
caatcaaAGTTGACGATTTTTCCCGCGGCGCATTTTGATTGGCTGATATC
AGCGTAACGGGTAGCTAAAGTAGCGATTTTTTCACtcattctgttttttt
tttatggtGGATGGAGgctttgtcaaaaattttcaagttaagtGAATCAA
TACAatatactttttaaaattgattggcttgttttttatgttttcttgGA
TGGAACCAGGGGTTTAATGACTTCAAATATCTACTTAATCAAACAGGCTT
ACTTTTCCCAATGATTTTCTAGAATTTCTGTAGGAAATTATCTCAAAAAG
GAGCCTCAATAATCTGGCTTATGGTAATAAATACTAGATTTGAAGATCAA
AGCTTTTTTGTGTTCCTTCAATATCTTTTCTTTCTCGTGTTTACTTCAGG
TCTTTGATCTGGGGGATGGATGTTTCGACCGACGATATCCGAAAAAGCTT
AAGCTCGACCAAAAAAGTTTCACGAAATGAAAGACTTTATCCTGGATTTG
AAGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036808-exon-sc0001518-1491911889:29141..29560 | TCONS_00036808-exon-sc0001518-1491911889:29141..29560 | Clytia hemisphaerica | exon |
| TCONS_00036808-exon-sc0001518-1510915933:29141..29560 | TCONS_00036808-exon-sc0001518-1510915933:29141..29560 | Clytia hemisphaerica | exon |
| TCONS_00036808-exon-sc0001518-1575043694:29141..29560 | TCONS_00036808-exon-sc0001518-1575043694:29141..29560 | Clytia hemisphaerica | exon |
| TCONS_00036808-exon-sc0001518-1491911889:30240..30347 | TCONS_00036808-exon-sc0001518-1491911889:30240..30347 | Clytia hemisphaerica | exon |
| TCONS_00036808-exon-sc0001518-1510915933:30240..30347 | TCONS_00036808-exon-sc0001518-1510915933:30240..30347 | Clytia hemisphaerica | exon |
| TCONS_00036808-exon-sc0001518-1575043694:30240..30347 | TCONS_00036808-exon-sc0001518-1575043694:30240..30347 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001518 | supercontig | sc0001518:29141..30347 + |
Blast
The following BLAST results are available for this feature:
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