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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036802 ID=TCONS_00036802|Name=TCONS_00036802|organism=Clytia hemisphaerica|type=transcript|length=1401bp
ATTCGTGGGAGACTTGACaaggaaattgactttttaaacTGCATTTTTTT
GACATTCATTGCACAGATTTCAACAAAGATCAACGAAAAGAAAGCTGCTG
TATGTTTCAGTATgaattttctcttgtttttatctttttgtcTGGATTTA
GAAAGTTTggaaagttttcttcaaaagttatcCACCATTTTTAGAAACCA
TGTTCTGTCTAAAAACGAGAATTATccaatttgaaaagaaatccaAGTCT
AAACAAGTTGGTCTAATCGGCATTTGCACTTTTCCTCGTTTACAAATTAA
CCTTCTACTTTTTTCATACTGTTTTCTATTTGCCTTTAACTTTATCATCT
TTGAGAAATCATGTCTTTCTCAAATCAGATCAGAAAATAGTTTTGTCACT
GTCATTATATCATAAAAGGGGAGAGGGTTTTGTTAAAACAGTGCAGAAAG
CTTTGGTAGTTAGCAGTTCCATataatttcctttgtttttctttgcgTAA
ATGAGACATTTCTGCATTTTCAGTGTTTTGTGGAATGACACTTTGTTATC
GTTTCTACAGTCTTGTAACTGCTTCTTTGTGTTTGAAGAATTATGATTAG
CAAAGGTTTGATAAAGGATGATACGTTACGCAAGGTGTTCTCTAttagaa
attgtattttttaattactTGTGTAATCTTTTGTTTTACTTATGTCGTGC
GACAGTTCGtttgaagtatttttgtctGGAGATTTGAGGAGAAAAAGCTT
TGATAAAAAGTAtatgtattttttcaaaatgtttattattgatttgtttt
ttgttcCTATTCATCAATTATTGTAGTCGATTATTGTTTAATGAGCTATG
AAACGATTGTTGAGTTTTGGGAATTCCTTTAGAGCAGTTCTTTGAGAGGA
GATGTCAGGTTTGAATGGTATTAGGAACATAATTTAAGTCATTGTTTTGA
TACGTGGTAGAAGATGAGCTGATTGGGATTGattgaattttatgaaatag
GTTGTATACTAGATGAAGTGCTCTATTAAGCATTGTTTTGTATCTGCTTT
CTCGACAGTTAATATTGTAAGTTGGTGATTTTACTGGCAGAATAAAGGGT
CGTCATCCGGTTTCCGCATTTTTGCTACTTTTGCTTTTAAACAGTTTCTA
GATGAAGGCTTGTTTTAGTAGActttgttttgactggactTGGTTATGAC
CTTGTTTTCTTGCATGTGTCTTGATTTCGAGATGAACTTTTCATTATTGA
CAAGGTTTTATGTAACTTTTCGAAATCATCCTTTTTCAAAGCTTGGTGAT
ATTTCAACGAATTTAAACTCTGCGTTGTGCTGACAGGTTTCGCTATTGAA
ATGATTATGGCTTTCAGATCCctcttttgaatcttttttgacCAATTTGC
T Run BLAST on NCBI transcript from alignment at sc0001518:15292..16692+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036802 ID=TCONS_00036802|Name=TCONS_00036802|organism=Clytia hemisphaerica|type=transcript|length=1401bp|location=Sequence derived from alignment at sc0001518:15292..16692+ (Clytia hemisphaerica)
ATTCGTGGGAGACTTGACaaggaaattgactttttaaacTGCATTTTTTT
GACATTCATTGCACAGATTTCAACAAAGATCAACGAAAAGAAAGCTGCTG
TATGTTTCAGTATgaattttctcttgtttttatctttttgtcTGGATTTA
GAAAGTTTggaaagttttcttcaaaagttatcCACCATTTTTAGAAACCA
TGTTCTGTCTAAAAACGAGAATTATccaatttgaaaagaaatccaAGTCT
AAACAAGTTGGTCTAATCGGCATTTGCACTTTTCCTCGTTTACAAATTAA
CCTTCTACTTTTTTCATACTGTTTTCTATTTGCCTTTAACTTTATCATCT
TTGAGAAATCATGTCTTTCTCAAATCAGATCAGAAAATAGTTTTGTCACT
GTCATTATATCATAAAAGGGGAGAGGGTTTTGTTAAAACAGTGCAGAAAG
CTTTGGTAGTTAGCAGTTCCATataatttcctttgtttttctttgcgTAA
ATGAGACATTTCTGCATTTTCAGTGTTTTGTGGAATGACACTTTGTTATC
GTTTCTACAGTCTTGTAACTGCTTCTTTGTGTTTGAAGAATTATGATTAG
CAAAGGTTTGATAAAGGATGATACGTTACGCAAGGTGTTCTCTAttagaa
attgtattttttaattactTGTGTAATCTTTTGTTTTACTTATGTCGTGC
GACAGTTCGtttgaagtatttttgtctGGAGATTTGAGGAGAAAAAGCTT
TGATAAAAAGTAtatgtattttttcaaaatgtttattattgatttgtttt
ttgttcCTATTCATCAATTATTGTAGTCGATTATTGTTTAATGAGCTATG
AAACGATTGTTGAGTTTTGGGAATTCCTTTAGAGCAGTTCTTTGAGAGGA
GATGTCAGGTTTGAATGGTATTAGGAACATAATTTAAGTCATTGTTTTGA
TACGTGGTAGAAGATGAGCTGATTGGGATTGattgaattttatgaaatag
GTTGTATACTAGATGAAGTGCTCTATTAAGCATTGTTTTGTATCTGCTTT
CTCGACAGTTAATATTGTAAGTTGGTGATTTTACTGGCAGAATAAAGGGT
CGTCATCCGGTTTCCGCATTTTTGCTACTTTTGCTTTTAAACAGTTTCTA
GATGAAGGCTTGTTTTAGTAGActttgttttgactggactTGGTTATGAC
CTTGTTTTCTTGCATGTGTCTTGATTTCGAGATGAACTTTTCATTATTGA
CAAGGTTTTATGTAACTTTTCGAAATCATCCTTTTTCAAAGCTTGGTGAT
ATTTCAACGAATTTAAACTCTGCGTTGTGCTGACAGGTTTCGCTATTGAA
ATGATTATGGCTTTCAGATCCctcttttgaatcttttttgacCAATTTGC
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036802-exon-sc0001518-1491911889:15292..16692 | TCONS_00036802-exon-sc0001518-1491911889:15292..16692 | Clytia hemisphaerica | exon |
| TCONS_00036802-exon-sc0001518-1510915933:15292..16692 | TCONS_00036802-exon-sc0001518-1510915933:15292..16692 | Clytia hemisphaerica | exon |
| TCONS_00036802-exon-sc0001518-1575043694:15292..16692 | TCONS_00036802-exon-sc0001518-1575043694:15292..16692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001518 | supercontig | sc0001518:15292..16692 + |
Blast
The following BLAST results are available for this feature:
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