TCONS_00036778 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036778
Unique NameTCONS_00036778
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036778 ID=TCONS_00036778|Name=TCONS_00036778|organism=Clytia hemisphaerica|type=transcript|length=185bp
tagatggATCTTCAATCGCTGAAAGACTTTCCAAACAGATTAATAAAGTT
TGCAAGGAAATCAAAAATCTATTGGCAAGTTACAATTCTATGAATCACGA
AATGTCTTCTGGATTTTAAAATGTGGAGTACATTGAGGCTCTAAATGTAA
AATCATCGATGTATAACGCtgtcaactttgttttt
Run BLAST on NCBI

transcript from alignment at sc0001510:44436..44620

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036778 ID=TCONS_00036778|Name=TCONS_00036778|organism=Clytia hemisphaerica|type=transcript|length=185bp|location=Sequence derived from alignment at sc0001510:44436..44620 (Clytia hemisphaerica)
aaaaacaaagttgacaGCGTTATACATCGATGATTTTACATTTAGAGCCT
CAATGTACTCCACATTTTAAAATCCAGAAGACATTTCGTGATTCATAGAA
TTGTAACTTGCCAATAGATTTTTGATTTCCTTGCAAACTTTATTAATCTG
TTTGGAAAGTCTTTCAGCGATTGAAGATccatcta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021722XLOC_021722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036778-exon-sc0001510-1491911889:44436..44620TCONS_00036778-exon-sc0001510-1491911889:44436..44620Clytia hemisphaericaexon
TCONS_00036778-exon-sc0001510-1510915933:44436..44620TCONS_00036778-exon-sc0001510-1510915933:44436..44620Clytia hemisphaericaexon
TCONS_00036778-exon-sc0001510-1575043694:44436..44620TCONS_00036778-exon-sc0001510-1575043694:44436..44620Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001510supercontigsc0001510:44436..44620 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036778 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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