TCONS_00036775 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036775
Unique NameTCONS_00036775
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036775 ID=TCONS_00036775|Name=TCONS_00036775|organism=Clytia hemisphaerica|type=transcript|length=135bp
TTGGTAATGTACAAAATTCgttattattgaaaatttgaaaagaaaacctc
TTTTTGGGCCCAAAATTTATAGTATATTATAGAAGTATATTCTACAGGTC
TATTGACCTGTATGAAACAATTTcatttaaattta
Run BLAST on NCBI

transcript from alignment at sc0001510:41872..42006

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036775 ID=TCONS_00036775|Name=TCONS_00036775|organism=Clytia hemisphaerica|type=transcript|length=135bp|location=Sequence derived from alignment at sc0001510:41872..42006 (Clytia hemisphaerica)
taaatttaaatgAAATTGTTTCATACAGGTCAATAGACCTGTAGAATATA
CTTCTATAATATACTATAAATTTTGGGCCCAAAAAgaggttttcttttca
aattttcaataataacGAATTTTGTACATTACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021719XLOC_021719Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036775-exon-sc0001510-1491911889:41872..42006TCONS_00036775-exon-sc0001510-1491911889:41872..42006Clytia hemisphaericaexon
TCONS_00036775-exon-sc0001510-1510915933:41872..42006TCONS_00036775-exon-sc0001510-1510915933:41872..42006Clytia hemisphaericaexon
TCONS_00036775-exon-sc0001510-1575043694:41872..42006TCONS_00036775-exon-sc0001510-1575043694:41872..42006Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001510supercontigsc0001510:41872..42006 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036775 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top