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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036769 ID=TCONS_00036769|Name=TCONS_00036769|organism=Clytia hemisphaerica|type=transcript|length=436bp
gaaaaatctgggaaaagcaatttgttcttttaaagtatagcttttttctc
aattgctctgacgaccatcgaaaaattgttttgctcgctttACCACCCAT
TGTACATTAGAGTACAATTAAATAAGTGCAAAAACAGGATGGGTTAATAC
TAATAATTGACATTGTCATACCAAATTAGAATCAAGCAGCTCTTCATGTC
CACGATATTCACTCACTGGGTTGTCACTTTCTGCATGGTGTGTAATTTCT
GCAAGTGATGTCAGGATATCAGGAACTAACTTCTTGATGTAATTCAATTG
TTTATCTAATCATTGGAATAAGGAAGATCCAAAATTTATAttaaaatgaA
ACAAGTTGGTGGAACCTTGTCCATTGTTGGTGAGACTCTCCACTTCGATG
CCAGCTGGCTTTTTGCGTCCATCAACTTGTTATTTG Run BLAST on NCBI transcript from alignment at sc0001510:24749..27867- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036769 ID=TCONS_00036769|Name=TCONS_00036769|organism=Clytia hemisphaerica|type=transcript|length=3119bp|location=Sequence derived from alignment at sc0001510:24749..27867- (Clytia hemisphaerica)
GAAAAATCTGGGAAAAGCAATTTGTTCTTTTAAAGTATAGCTTTTTTCTC
AATTGCTCTGACGACCATCGAAAAATTGTTTTGCTCGCTTTACCACCCAT
TGTACATTAGAGTACAATTAAATAAGTGCAAAAACAGGATGGGTTAATAC
TAATAATTGACATTGTCATACCAAATTAGAATCAAGCAGCTCTTCATGTC
CACGGTCTCATTCCTGACTAACTTCAACATACTGAAATTAAATTGATAAC
ATATTCAACAGTGTACAATTTTCCACTCCCGTTTTATGGCATAGAGGCTA
GAAATTATTTGAAGGATTTCAAGTCATTTATTACACAAATTTGACAAATT
CAATATTTACTACAAAGTATTAAATGTATTTTATTAGTACAAAAAATTTT
CTTAAATCTAGATATTCACTCACTGGGTTGTCACTTTCTGCATGGTGTGT
AATTTCTGCAAGTGATGTCAGGATATCAGGAACTAACTTCTTGATGTAAT
TCAATTGTTTATCTAATCATTGGAATAAGGAAGATCCAAAATTTATATTA
AAATGTAAGAAATTTTTTTTTAATTTGGTAGTTTGAAGCAAGGCTCTCCA
TTCAACTGTTAAATTAAATTATTTTCTTTGAATGTCATCTCTACTATATC
TCAATGTGTCTTTCACTTTCCATCTTGGTAAAAAAGTGTTTTGAGTACCG
TCTATTAAAATCAAAGTTACCTTTCTGTTTAAGTTTCTCTTTCAACTCTC
TTAACTCCTTGTTTGTTGCGAGACATTTGCTACAAGACACTGTTAAGGAA
ACAAGAGTTAATTTTATTTTTGTAAATGAATAAATTGNTGCTACAAGACA
CTGTTAAAGAAACAAGAGTTAATTTTGTTTTTGTAAATGAATAAATTGCA
AAGGAAATTTAATGGTGACTGATTTAGTTAAGGCAAATTTTATTGAATAA
GGTAAGGGTTTTTGATGGTACATACCTTTTTTTTTCCATATGGTGATAAA
CAGGTGATCTTTCTGAGAATTGAAACAACTTATATCAATATAACTATTTT
GACAACATTTAAAATGATCAAGAGTAAAGGGTCTCAAAAAACACTCCCCT
GGTGAAAAGCTTCAGTTTAATAATTATTTACCTCAAGCCTTTTTTTTAGA
AAACTACTTAAAAACGAAATCTAGATTACTTTTTCCATACCTTGAACAAA
ATCAGAATTAGGTAGTTTGAGAGGAGCTGGAGCAAGATCCATGTTCCCTA
AAATTAAAATATTGATGTGATGTCAGGTCATGTTGAAAAATTCAAGGAAT
GAATAAAAGACCATGTACCGNTTAGGTAGTTTGAGAGGAGCTGGAGCAAG
ATCCATGTTCCCTAAAATTAAAATATTGATGTGATGTCAGGTCATGTTGA
AAAATTGAAGGAATGGATAAAAGACCATGTATGCTAATAAAATAATAAAT
GCTAATAAATTTTTAATCTTCAAATTTTCTTTTTAATACAAGAATTGGTT
AGTAATTTTGAAAGAAGCAATATGTATATGAATAAATTATAATAACGTCT
TACTCTGGGCTTTGGTGATTTCGGAAAGGTGGAGTTGCTTGGTCCAGGAC
AGTTTTTTGTTTAGCTACTTGTGGCTGTTGGAATTGTTGTGGTGGTGGTG
GTGGTTTAATTTGTGTTGATTCTTGGCTTGGTTGAAATTTGAATTGGGAA
TTATGTTGATATGATGGCTGGTACTGTTTGGGTGGTTTGAATTCTGTATT
TTGCTGTTGGTCCACATTGGTTTGGATGATTTCAAAGTCTGAGAAAATAT
TTATTTAATTCAAGTCAAGTCAATCTTCAATTTTCCATTAAAATCATTAC
ATCATTAAGTTGTTTTCGTTCTTGAAATTACAAATTCTCATTTATTGAAC
AAATTTATTGTACTGGCAAGCTACACAATGTAAAAGGTTTATTAAAAATC
CAAATTACACCAAAACAAATCAGAGGGGTGTGTGCAGNGTTAAACATCCA
AATTACACCAAAACAAATCAGAGGGGTCTTATTTTATTCAAATATCGCAA
GTTCCTACTAAAGTTACCTTCAGAATCATTCATGTCATTGGCTTGATAGT
TAATGTCGTCCATGTCAACAAATTTATCTAGTAAATCTCCACTCAGATTT
ATTTTGATTGATGCTTCTGTAGAAAAAGAAAACTGTTTCAAAAACGTGAA
GTTCCAAATTAGTTGTATAAAATGAATGGCTAATGATGTTTTCTTTGTAC
TAATTATTTTTGAATCAATTAGAGTCATAGCACAGATTTACTTTCCAACC
TTCGATAAGTTAATATTAAGCAGATATTCGACAAGAAAAATCAGATGTCG
AAAATTATTCAGTCAAGCTTGATGATATTCGACAAAGCAAAGCTGAGGGT
CCAAAGTGCGTTTTGCTTAGAGGTGGACAATAAAAGTTATTATACCTTTT
TTTCCAGAATTTCCTGTGTGAGCATCTTTGTGGCTTTTGCCTTTGCCTGC
TTAGTTTTAAGATTAGATTTAAAAAAAGTAGTGAATGGGATGTGGATAGA
ATTTACCATTAATTATTTTTGCACAAATACTTAATGTGCAAGTACAGAGT
TTATAATGACCATAACGTAGGAATTCTTCATGTACCTTTTTGTTTTTGAG
CTGTTATGGCTTCAACGTCACCTGTTAAAAAAATTGATAAAAGTTCTTGT
CAATCCTTCTACTTTATTGGGATTTAAATTGTGTTATCTGTAAGACATTT
TCAAACAAGTCTCTAAAAATGTCGAGCAACTTATCTTAAATGTTTACTGG
CATCAGACAAGTGCTAATAATGTATATTTCAACAACAAACATGGATTACT
TGGTAGTAAAATGCACAGGCACAAAACCATGAAAGAGTTGTCCTCTAATA
TTGCCATCTGTGAAATTAAGTCCCTGTCAAATCTTATAACTTCGCAGATG
AGTTTTGATTACAAAAATCACGGCCAGTATAATGAAATTTATTGTAGGCT
TAACAGAATTAACTTCATTTTTATTTAAAGGAAACAAGTTGGTGGAACCT
TGTCCATTGTTGGTGAGACTCTCCACTTCGATGCCAGCTGGCTTTTTGCG
TCCATCAACTTGTTATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036769-exon-sc0001510-1575043694:27664..27867 | TCONS_00036769-exon-sc0001510-1575043694:27664..27867 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1575043694:27314..27456 | TCONS_00036769-exon-sc0001510-1575043694:27314..27456 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1575043694:24749..24837 | TCONS_00036769-exon-sc0001510-1575043694:24749..24837 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1510915933:27664..27867 | TCONS_00036769-exon-sc0001510-1510915933:27664..27867 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1510915933:27314..27456 | TCONS_00036769-exon-sc0001510-1510915933:27314..27456 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1510915933:24749..24837 | TCONS_00036769-exon-sc0001510-1510915933:24749..24837 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1491911889:27664..27867 | TCONS_00036769-exon-sc0001510-1491911889:27664..27867 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1491911889:27314..27456 | TCONS_00036769-exon-sc0001510-1491911889:27314..27456 | Clytia hemisphaerica | exon |
| TCONS_00036769-exon-sc0001510-1491911889:24749..24837 | TCONS_00036769-exon-sc0001510-1491911889:24749..24837 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001510 | supercontig | sc0001510:24749..27867 - |
Blast
The following BLAST results are available for this feature:
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