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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036768 ID=TCONS_00036768|Name=TCONS_00036768|organism=Clytia hemisphaerica|type=transcript|length=1149bp
TCAGTAGATATGAGCGATTGAAAATTACAATCATCTTACCGATATTGTCA
GCAAGTTTAGCTGAGGGTTTCCTTTCTCTTTGTGTACGAACCATgatgaa
tgatgaattttgTTCACAACTTTAACAAAGTAAGTAATTGAcataaaata
gcaaaaaactTGACGTccgatttcaaaaatgaaatgggtcgactttaaat
tttaaaaaacattttcgaaCGTCAATTTATTCGAAATTCGATTCATTAAT
TCGAACGTCAACATTcaaattatttgattgacaaGACAGCTCAGGCGCCA
TTTTCGTCTCAGTGTCAGGCGTCGGGTCAGGCTGGTAGGTCGCGTTCCAC
ATATTACAGGAAAAGAGAATTATTTCTAACTGACACTAATGAAGTCTTTC
ATGACTGCATTGATGTAACAGACGTTGATGATGATGTTTACGTATATCCT
GTTCAAGATCACCCAAACGATTTTGAACTCCAGAGTGATGTAGAGATGGT
GGAAGAATCCAGTACGTCAGTCGAAGAAGAAATGTATGATAATGATGACG
CTTCAAATCTACCAGATTTTGGTGATGTTTTTGAATGTAAGTGTTGTAGA
TTTGTAGTTTGAGACCACCAAAATAGTATGTACGAAGTGGAGGGGGAGAA
TGGTGTTTNTTGTATATTAATGATGACGCTTCAAATCTACCAGATTTTGG
TGATGTTTTTGAATCTTATGTGACCAGTCATTATGATAACACAAATGTCG
AAGATCTGGTGGAAGTTTTCAAATTACAAGAAGAGTTTGCAAGTGTTCCT
GAATTTTTAGACGAAAATGATGACACTGATTCTGTTTACTTTGACTGTGA
TAAATTTGATGAACCGATTGAGGAGCAGCAGCATGACAACATTCAAGAAC
AAGCCAATATGAAAAGCCAGTTTTCCTCAGCACTTTACCCTGATTCCACA
GTAACCCTTGGTGCTGCTATAACCATGGTGATtgcattttcacaaaaatt
caagcTTCCTGGTGTTGCTCTTTCTTCATTAGTTCTTCTTTTAAACATCC
TTTTACCAGCAAACCATATTTTTCCGAAATCCCTGTTTATCCTGAAAAAA
CTACTTGCGTCACTTTCACCTGATGTTAAGACGCACTATTTTTGCAAAG Run BLAST on NCBI transcript from alignment at sc0001510:20759..23031- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036768 ID=TCONS_00036768|Name=TCONS_00036768|organism=Clytia hemisphaerica|type=transcript|length=2273bp|location=Sequence derived from alignment at sc0001510:20759..23031- (Clytia hemisphaerica)
TCAGTAGATATGAGCGATTGAAAATTACAATCATCTTACCGATATTGTCA
GCAAGTTTAGCTGAGGGTTTCCTTTCTCTTTGTGTACGAACCATGATGAA
TGATGAATTTTGTTCACAACTTTAACAAAGTAAGTAATTGACATAAAATA
GCAAAAAACTTGACGTCCGATTTCAAAAATGAAATGGGTCGACTTTAAAT
TTTAAAAAACATTTTCGAACGTCAATTTATTCGAAATTCGATTCATTAAT
TCGAACGTCAACATTCAAATTATTTGATTGACAAGACAGCTCAGGCGCCA
TTTTCGTCTCAGTGTCAGGCGTCGGGTCAGGCTGGTAGGTCGCGTTCCAC
ATATTACAGGAAAAGAGAATTATTTCTAACTGACACTAATGAAGTCTTTC
ATGACTGCATTGATGTAACAGACGTTGATGATGATGTTTACGTATATCCT
GTTCAAGATCACCCAAACGATTTTGAACTCCAGAGTGATGTAGAGATGGT
GGAAGAATCCAGTACGTCAGTCGAAGAAGAAATGTATGATAATGATGACG
CTTCAAATCTACCAGATTTTGGTGATGTTTTTGAATGTAAGTGTTGTAGA
TTTGTAGTTTGAGACCACCAAAATAGTATGTACGAAGTGGAGGGGGAGAA
TGGTGTTTNTTGTATATTAATGATGACGCTTCAAATCTACCAGATTTTGG
TGATGTTTTTGAATGTAAGTGTTATAGATTTGTAGTTTGGGACCACCAAA
ATAGTATGTCGAAGTGGAGGGGGAGAAGGGTGTTTGACAGAAGTGATTCT
TCCAGGAATTGAGCCTTGTTGGCAACAGGTTGTATATGCTGTATATTTGT
GGACCTTTAGCTCGACCCTAAAGCCCAATGGCGCGTATTTTACTTTTTTA
TCGTACCCCGACCCCCCTCCCCTCCAGTGAAACTCAGTGTTCTTTTAGCC
GGGATGTGCATTAAATCATAGCCTGGGTTTCTATGATCGTCTGATTTCCA
GTGTAAATATAAATAAAAGAAAGGAAAGGAGAGCAAGGAGATGGCGGCCT
GAGACTTGTTGGTATTGTGGTTTGTACATGTCTTTGCTTAATGTATGTAT
GTATGTATGTATTATGTATTAATCATATTGCCTTTTTAGCTTATGTGACC
AGTCATTATGATAACACAAATGTCGAAGATCTGGTGGAAGTTTTCAAATT
ACAAGAAGAGTTTGCAAGTGTTCCTGAATTTTTAGACGAAAATGATGACA
CTGATTCTGTTTACTTTGACTGTGATAAATTTGGTGAGATTACAATATTT
AAATATATAGTTATAATTTCTAAAGTTGTTGAGAAATTTTACAAGAAGTG
TGAAGAGTACATGTNATAATTTCTAAAGTTGTTGGGAAATTTTACAAGAA
GTGTGAAGAGTACATGTCTTCTCAAAAGCGGATATGCTTGCGTATAGGGG
GAGGAAAGGGGTCAAAGGAAAATGTATGTAGTAGGCAAAGAAAATTTTTT
CGTAGCCCTTTTTTGCTTGTTTTTTTGTTGACTTTTACACTTATCTGTTC
TTATACGCATCAAGGAAAATAAAAAGTTTCTTAATAAATATTGAGTTTCA
TATATGTGAATATATTCAACATTTTCTTCAACCAAGGGGCAGCGAGGGGA
ATGAATGGCATTTGTGGAGTATGCTTATGTGTTTAAGGAGGAGGATTTTA
GTGCGTACTGTGAAGTCGGGAAACTTGCATCACTGGAGGCAAACTTGCTT
AGCCATCAAATGACTGACCAATCAATGCAGCAAAATTTCAAAACAAATGA
ACTACGCAGCTCCATTTGCAGCTGTTTTGATGTAAGTTTGTATTTTAATG
ACCAGTATATGCATGTTTGCCTCCACTGATGCAAGTTTCCCGACTTCACG
GTACGTATTATATAGGACAGCCCCAAAGAAACAACAATGTGCTTTTTTCA
AGCCTAGTTTTGAAAATACTTTCTACTTATAGATGAACCGATTGAGGAGC
AGCAGCATGACAACATTCAAGAACAAGCCAATATGAAAAGCCAGTTTTCC
TCAGCACTTTACCCTGATTCCACAGTAACCCTTGGTGCTGCTATAACCAT
GGTGATTGCATTTTCACAAAAATTCAAGCTTCCTGGTGTTGCTCTTTCTT
CATTAGTTCTTCTTTTAAACATCCTTTTACCAGCAAACCATATTTTTCCG
AAATCCCTGTTTATCCTGAAAAAACTACTTGCGTCACTTTCACCTGATGT
TAAGACGCACTATTTTTGCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036768-exon-sc0001510-1575043694:22318..23031 | TCONS_00036768-exon-sc0001510-1575043694:22318..23031 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1575043694:21749..21892 | TCONS_00036768-exon-sc0001510-1575043694:21749..21892 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1575043694:20759..21049 | TCONS_00036768-exon-sc0001510-1575043694:20759..21049 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1510915933:22318..23031 | TCONS_00036768-exon-sc0001510-1510915933:22318..23031 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1510915933:21749..21892 | TCONS_00036768-exon-sc0001510-1510915933:21749..21892 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1510915933:20759..21049 | TCONS_00036768-exon-sc0001510-1510915933:20759..21049 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1491911889:22318..23031 | TCONS_00036768-exon-sc0001510-1491911889:22318..23031 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1491911889:21749..21892 | TCONS_00036768-exon-sc0001510-1491911889:21749..21892 | Clytia hemisphaerica | exon |
| TCONS_00036768-exon-sc0001510-1491911889:20759..21049 | TCONS_00036768-exon-sc0001510-1491911889:20759..21049 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001510 | supercontig | sc0001510:20759..23031 - |
Blast
The following BLAST results are available for this feature:
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