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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036760 ID=TCONS_00036760|Name=TCONS_00036760|organism=Clytia hemisphaerica|type=transcript|length=788bp
CACCATTCTCCCCCTCCACTTCGTACATACTATTTTGGTGGTCTCAAACT
ACAAATCTACAACACTTACATTCAAAAACATCACCAAAATCTGGTAGATT
TGAAGCGTCATCATTATCATACATTTCTTCTTCGACTGACGTACTGGATT
CTTCCACCATCTCTACATCACTCTGGAGTTCAAAATCGTTTGGGTGATCT
TGAACAGGATATACGTAAACATCATCATCAACGTCTGTTACATCAATGCA
GTCATGAAAGACTTCATTAGTGTCAGTTAGAAATAATTCTCTTTTCCTGT
AATATGTGGAACGCGACCTACCAGCCTGACCCGACGCCTGACACTGAGAC
GAAAATGGCGCCTGAGCTGTCttgtcaatcaaataatttgAATGTTGACG
TTCGAATTAATGAATCGAATTTCGAATAAATTGACGttcgaaaatgtttt
ttaaaatttaaagtcgacccatttcatttttgaaatcggACGTCAagttt
tttgctattttatgTCAATTACTTACTTTGTTAAAGTTGTGAAcaaaatt
catcattcatcATGGTTCGTACACAAAGAGAAAGGAAACCCTCAGCTAAA
CTTGCTGACAATATCGGAGAGGACACTGGGCCATTGCTCAAAATTCTTTA
CACCGTGGAGGAGAGTAATGGTAAAAGGATGCAGCAGACACTACCCTATT
CCAGGCTGAAACCCAAATGTTTGACTACCGGCGAGGAACTACATGTGAAA
GATTTGGCTGAACTGCGCCATTATAACTTTTTATACCC Run BLAST on NCBI transcript from alignment at sc0001510:22377..23344+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036760 ID=TCONS_00036760|Name=TCONS_00036760|organism=Clytia hemisphaerica|type=transcript|length=968bp|location=Sequence derived from alignment at sc0001510:22377..23344+ (Clytia hemisphaerica)
CACCATTCTCCCCCTCCACTTCGTACATACTATTTTGGTGGTCTCAAACT
ACAAATCTACAACACTTACATTCAAAAACATCACCAAAATCTGGTAGATT
TGAAGCGTCATCATTATCATACATTTCTTCTTCGACTGACGTACTGGATT
CTTCCACCATCTCTACATCACTCTGGAGTTCAAAATCGTTTGGGTGATCT
TGAACAGGATATACGTAAACATCATCATCAACGTCTGTTACATCAATGCA
GTCATGAAAGACTTCATTAGTGTCAGTTAGAAATAATTCTCTTTTCCTGT
AATATGTGGAACGCGACCTACCAGCCTGACCCGACGCCTGACACTGAGAC
GAAAATGGCGCCTGAGCTGTCttgtcaatcaaataatttgAATGTTGACG
TTCGAATTAATGAATCGAATTTCGAATAAATTGACGttcgaaaatgtttt
ttaaaatttaaagtcgacccatttcatttttgaaatcggACGTCAagttt
tttgctattttatgTCAATTACTTACTTTGTTAAAGTTGTGAAcaaaatt
catcattcatcATGGTTCGTACACAAAGAGAAAGGAAACCCTCAGCTAAA
CTTGCTGACAATATCGGTAAGATGATTGTAATTTTCAATCGCTCATATCT
ACTGAAGAGCCAATCATTTTTCGGCTTTTAGTCTGGTGAAATAGATTTGT
AAAATCTGGTCTTCGTGAAAATTTATTCTAATTCAGTTAAGGCACAGATT
CTTCCTTTAACATGGTCCGGACTAAATAATTGATTAATTCCTTTAGGAGA
GGACACTGGGCCATTGCTCAAAATTCTTTACACCGTGGAGGAGAGTAATG
GTAAAAGGATGCAGCAGACACTACCCTATTCCAGGCTGAAACCCAAATGT
TTGACTACCGGCGAGGAACTACATGTGAAAGATTTGGCTGAACTGCGCCA
TTATAACTTTTTATACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036760-exon-sc0001510-1491911889:22377..22992 | TCONS_00036760-exon-sc0001510-1491911889:22377..22992 | Clytia hemisphaerica | exon |
| TCONS_00036760-exon-sc0001510-1510915933:22377..22992 | TCONS_00036760-exon-sc0001510-1510915933:22377..22992 | Clytia hemisphaerica | exon |
| TCONS_00036760-exon-sc0001510-1575043694:22377..22992 | TCONS_00036760-exon-sc0001510-1575043694:22377..22992 | Clytia hemisphaerica | exon |
| TCONS_00036760-exon-sc0001510-1491911889:23173..23344 | TCONS_00036760-exon-sc0001510-1491911889:23173..23344 | Clytia hemisphaerica | exon |
| TCONS_00036760-exon-sc0001510-1510915933:23173..23344 | TCONS_00036760-exon-sc0001510-1510915933:23173..23344 | Clytia hemisphaerica | exon |
| TCONS_00036760-exon-sc0001510-1575043694:23173..23344 | TCONS_00036760-exon-sc0001510-1575043694:23173..23344 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001510 | supercontig | sc0001510:22377..23344 + |
Blast
The following BLAST results are available for this feature:
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