TCONS_00036741 (transcript) - C. hemisphaerica

Overview
NameTCONS_00036741
Unique NameTCONS_00036741
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length575

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00036741 ID=TCONS_00036741|Name=TCONS_00036741|organism=Clytia hemisphaerica|type=transcript|length=575bp
GCATCACTCCGCAACCCAAATGGTTGCAGTTTTTCAGTTTCTAGTTTTAT
GAAATCTTTTGTTCAACCTTTTTGGACTAATAGACGAAGAACGGGAAACA
ACCCACAAAATATTCGTCAACCCCTGAAAACATCCACATTCACAGAGAAT
AACGGtgatgtttttttattgtttatcaACAATAAATTAATTCAATTGTT
TTTGCAGCTCGTGTGTCAGCTAGGAAACGATTGCTAGTAATTGATATTTT
GAATCCTACTATTCAAACTCATCGATCCTAAGATGGTCTGACAAAGGAGA
AATGACAcccaaagaaatttattttagatttacgCCAGATATCTTAATGA
AATATTATTGATTACTATAGCCATTTTCATGTATTTATTCACTTTTTTAT
TCATTCtacttttaaaattaaatttaataaataaattaattatacttatt
tttctttactgagaTCTACTTTGCAGTTTTAACCAAATGTTGGATGGCCT
GGCGTTCCTAGAAACCATCTGAGTAGTACACAGTGGTACTTGTTAATATG
AGCTTGCATGTTATGTATTTTCATG
Run BLAST on NCBI

transcript from alignment at sc0001507:23441..24015

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00036741 ID=TCONS_00036741|Name=TCONS_00036741|organism=Clytia hemisphaerica|type=transcript|length=575bp|location=Sequence derived from alignment at sc0001507:23441..24015 (Clytia hemisphaerica)
CATGAAAATACATAACATGCAAGCTCATATTAACAAGTACCACTGTGTAC
TACTCAGATGGTTTCTAGGAACGCCAGGCCATCCAACATTTGGTTAAAAC
TGCAAAGTAGAtctcagtaaagaaaaataagtataattaatttatttatt
aaatttaattttaaaagtaGAATGAATAAAAAAGTGAATAAATACATGAA
AATGGCTATAGTAATCAATAATATTTCATTAAGATATCTGGcgtaaatct
aaaataaatttctttgggTGTCATTTCTCCTTTGTCAGACCATCTTAGGA
TCGATGAGTTTGAATAGTAGGATTCAAAATATCAATTACTAGCAATCGTT
TCCTAGCTGACACACGAGCTGCAAAAACAATTGAATTAATTTATTGTtga
taaacaataaaaaaacatcaCCGTTATTCTCTGTGAATGTGGATGTTTTC
AGGGGTTGACGAATATTTTGTGGGTTGTTTCCCGTTCTTCGTCTATTAGT
CCAAAAAGGTTGAACAAAAGATTTCATAAAACTAGAAACTGAAAAACTGC
AACCATTTGGGTTGCGGAGTGATGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021703XLOC_021703Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00036741-exon-sc0001507-1491911889:23441..24015TCONS_00036741-exon-sc0001507-1491911889:23441..24015Clytia hemisphaericaexon
TCONS_00036741-exon-sc0001507-1510915933:23441..24015TCONS_00036741-exon-sc0001507-1510915933:23441..24015Clytia hemisphaericaexon
TCONS_00036741-exon-sc0001507-1575043694:23441..24015TCONS_00036741-exon-sc0001507-1575043694:23441..24015Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001507supercontigsc0001507:23441..24015 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036741 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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