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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00036737 ID=TCONS_00036737|Name=TCONS_00036737|organism=Clytia hemisphaerica|type=transcript|length=723bp
GTGGTACCAAGATTGCAAAGACATTTATGATTTTGAACGTATCAAATAAT
TCATTATATTTTGTGCGATGTTTGTTGGATTCAAATTGGCGTCGATTGGT
TCATCTTATTGACGAATGCATCtaaatttaaactttgaaatatAAAGTAT
TACTATCACTTGGAATATGGGACCCCACATACTTATGGTTACGAGAATTA
TCCCACCGGAAGAACTCAAAAATATAGTACAGCTACCTAAGATGAAGCGA
AAAAATAAATCTCGAAATGTCAATGAATGATGGAATCATCAAGATCCGGT
TCTTATAAGTTGCGAAGATTTGAAGACGTtataaagcaaaacattttcgA
ACCATTCAAGATTGATTGTCGTTACCCTAGCCGTATTCGAACATCTTGCA
TCCACTATATAGCAAGTTTGAGAAATTTTGATGTTCAACGTGTGATTAGC
CGAAAAAGATGTTGGTTGACTCGTCGTGCTCGAAAATTATTGTCAACCCT
ATCGATTGCATCACATCGCTGTGTTATCTGTTGCTTTGTTGAAGGAATCT
CTGGTATTTCCTTTCTTAATACTGTACTGCTCAAGCTTCTGAATCGATTC
GTATGTGACGTTTCTACCGGTCACTTCAAGATTACTTCAACCGTATCACT
GTCAAAGATAAAGATGTTTCGCAAGGCACAAGGAAGCCGGTAttgattta
atgattttttaacctttttctaT Run BLAST on NCBI transcript from alignment at sc0001507:5657..7917+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00036737 ID=TCONS_00036737|Name=TCONS_00036737|organism=Clytia hemisphaerica|type=transcript|length=2261bp|location=Sequence derived from alignment at sc0001507:5657..7917+ (Clytia hemisphaerica)
GTGGTACCAAGATTGCAAAGACATTTATGATTTTGAACGTATCAAATAAT
TCATTATATTTTGTGCGATGTTTGTTGGATTCAAATTGGCGTCGATTGGT
TCATCTTATTGACGAATGCATCtaaatttaaactttgaaatatAAAGTAT
TACTATCACTTGGAATATGGGACCCCACATACTTATGGTTACGAGAATTA
TCCCACCGGAAGAACTCAAAAATATAGTACAGCTACCTAAGATGAAGCGA
AAAAATAAATCTCGAAATGTCAATGAATGATGGAATCATCAAGATCCGGT
TCTTATAAGTTGGTAGGTtgattgaattttaattatacATCGTTTCATCT
TTTATCTGCAAGCTGTTTAAACCTTGAGGCCTGGAAACCGGTTTCCATCG
CAAAATAATGCGGTTGAGCCTTTGCCGTAATCTCGAAACTATAATTTGTC
AATAACCTAAATTTTATAGATTCTCATTAACTTTCTGGGTATTTTTATCC
TACATAGTCTTCAGGGATGttgtttttgaataattatttcttttcattat
tAATTAGCGAAGATTTGAAGACGTtataaagcaaaacattttcgAACCAT
TCAAGATTGATTGTCGTTACCCTAGCCGTATTCGAACATCTTGCATCCAC
TATATAGCAAGTTTGAGAAATTTTGATGTTCAACGTGTGATTAGCCGAAA
AAGATGTTGGTTGGTAGGTACTCTATTgcttattttttatcattttcaaa
tatttttgatgttgtttggTATATAACTTATTTCTTTAGTCTTTTGCTGC
ACTTAAAATGTATTAAAAAGGTCCAGGGGAatactagggttggcggatga
ggcGTATGTGTGGACGGGATCTCAGAAAAGCGACCCTTAGAGGacatttt
gctgaaaaggtgatgGTTAGAGAGACAAGATTACTAAAAAAGTGACCATT
GGAGAAACGTTTTCACAGGAatttttgaattgcaaaataatTCTCAAATA
CTATCAaagaatttctatctttcttcACTTTTGGCTTTTGTTTGTCTCCA
CTTTGTGAACAAAAGCGACCCTCAGAAAGACTAATTAAAgactttctgat
ttttgaaaCACTTAGAGAGACCTTGGAAGGAGAAAATCgtcccttaccgt
ccgcacatagcCATcgtccatttttgcctaagtactccACCCTCCGGCAA
CAAGGTTAATAGTAAAAGGCATACAGTGACTGAAATGGAACTGATGGTAC
GCTAGCGTGGCTCATCTTTCGCTGTCATACTCGGAGAAACTGAATAGCGG
ACTTATATCTACACCTTGTTTAATAATTAATTTCCCTTCCCTTCAGACTC
GTCGTGCTCGAAAATTATTGTCAACCCTATCGATTGCATCACATCGCTGT
GTTATCTGTTGCTTTGTTGAAGGAATCTCTGGTATTTCCTTTCTTAATAC
TGTACTGGTAAGTCAAAGACCTTGTTTTTAACTCGCCCGGTGTCACAAGA
AAAAAGTACACCCCTAAAAAAAGTACTCCTCAGTACATATTTCCTAGGAC
AAAAATACTTCTGAGAGTATATTGTTCTTAGGAAATTGTCACACcttcca
gaaaaaaagtacTCATATAAATACTATGAGAAGTCAAATTTCCATTAAAG
TTAGTATTTTGAGCTATTAACCAGTGTTTGTCTGTTGTCGGTCCATCAAC
TTCGAATTTGAACGAAGTTTAAAAAGTATAAGGTTAAGAAAATATagata
ttttcataaattacgatacgaacatcacttgcctcgttttgaaattattg
ccatgatGATTAACTCCCGGCGGAATTTATTAAAACTatttcctattcat
aaaaaaatcatgtcTCACGCAAGTTATGTTCGATTTAATCACATTTCAGT
ATGTTCAATTGTACCGTCAATTTTAATTGCTCATACCATACATAATTATC
CGGGAAGCTTctattcaaactgaaaaatagtGGGGCAAATATTTTgttgc
agaaaaaaagtttggctGCACGGAGACCTTTAACCCCGCGTTTGGactaa
ttttttctagccttaAAGCAAACCACCATCTTTGTCTATCAACtctttat
ttttatctaaaaaacaGCTCAAGCTTCTGAATCGATTCGTATGTGACGTT
TCTACCGGTCACTTCAAGATTACTTCAACCGTATCACTGTCAAAGATAAA
GATGTTTCGCAAGGCACAAGGAAGCCGGTAttgatttaatgattttttaa
cctttttctaT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00036737-exon-sc0001507-1491911889:5657..5968 | TCONS_00036737-exon-sc0001507-1491911889:5657..5968 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1510915933:5657..5968 | TCONS_00036737-exon-sc0001507-1510915933:5657..5968 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1575043694:5657..5968 | TCONS_00036737-exon-sc0001507-1575043694:5657..5968 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1491911889:6214..6369 | TCONS_00036737-exon-sc0001507-1491911889:6214..6369 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1510915933:6214..6369 | TCONS_00036737-exon-sc0001507-1510915933:6214..6369 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1575043694:6214..6369 | TCONS_00036737-exon-sc0001507-1575043694:6214..6369 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1491911889:7003..7113 | TCONS_00036737-exon-sc0001507-1491911889:7003..7113 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1510915933:7003..7113 | TCONS_00036737-exon-sc0001507-1510915933:7003..7113 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1575043694:7003..7113 | TCONS_00036737-exon-sc0001507-1575043694:7003..7113 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1491911889:7774..7917 | TCONS_00036737-exon-sc0001507-1491911889:7774..7917 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1510915933:7774..7917 | TCONS_00036737-exon-sc0001507-1510915933:7774..7917 | Clytia hemisphaerica | exon |
| TCONS_00036737-exon-sc0001507-1575043694:7774..7917 | TCONS_00036737-exon-sc0001507-1575043694:7774..7917 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001507 | supercontig | sc0001507:5657..7917 + |
Blast
The following BLAST results are available for this feature:
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